Description: A comprehensive study of the Earth system and its related processes requires a holistic examination and understanding of multidimensional data acquired with a large number of different sensors or produced by various models. To this end, the Digital Earth project developed a set of software solutions to study environmental data sets using visual approaches. In the following chapter, we present three data visualization products developed to deal with the challenges of the analysis and exploration of environmental data.

Description: Highlights • The Digital Earth Viewer is an open-source (EUPL-licensed) hybrid application (desktop and server use) for the realtime visualisation and exploration of 4D geoscientific data. • Splitting the viewer into a natively compiled server-component optimized for maximum throughput and a web-technology-based client component geared towards maximum compatibility allows to harness the strengths of both platforms. • Desktop builds are release for Windows, Linux, and MacOS. • The Digital Earth Viewer has been used productively on expedition cruises to plan underwater exploration missions as all as a presentation and data validation tool by the GLODA-project. Abstract A comprehensive study of the Earth System and its different environments requires understanding of multi-dimensional data acquired with a multitude of different sensors or produced by various models. Here we present a component-wise scalable web-based framework for simultaneous visualisation of multiple data sources. It helps contextualise mixed observation and simulation data in time and space. This work is an extended version of the conference paper (Buck et al., 2021).

Description: Recent advances in optical underwater imaging technologies enable the acquisition of huge numbers of high-resolution seafloor images during scientific expeditions. While these images contain valuable information for non-invasive monitoring of megabenthic fauna, flora and the marine ecosystem, traditional labor-intensive manual approaches for analyzing them are neither feasible nor scalable. Therefore, machine learning has been proposed as a solution, but training the respective models still requires substantial manual annotation. Here, we present an automated image-based workflow for Megabenthic Fauna Detection with Faster R-CNN (FaunD-Fast). The workflow significantly reduces the required annotation effort by automating the detection of anomalous superpixels, which are regions in underwater images that have unusual properties relative to the background seafloor. The bounding box coordinates of the detected anomalous superpixels are proposed as a set of weak annotations, which are then assigned semantic morphotype labels and used to train a Faster R-CNN object detection model. We applied this workflow to example underwater images recorded during cruise SO268 to the German and Belgian contract areas for Manganese-nodule exploration, within the Clarion–Clipperton Zone (CCZ). A performance assessment of our FaunD-Fast model showed a mean average precision of 78.1% at an intersection-over-union threshold of 0.5, which is on a par with competing models that use costly-to-acquire annotations. In more detail, the analysis of the megafauna detection results revealed that ophiuroids and xenophyophores were among the most abundant morphotypes, accounting for 62% of all the detections within the surveyed area. Investigating the regional differences between the two contract areas further revealed that both megafaunal abundance and diversity was higher in the shallower German area, which might be explainable by the higher food availability in form of sinking organic material that decreases from east-to-west across the CCZ. Since these findings are consistent with studies based on conventional image-based methods, we conclude that our automated workflow significantly reduces the required human effort, while still providing accurate estimates of megafaunal abundance and their spatial distribution. The workflow is thus useful for a quick but objective generation of baseline information to enable monitoring of remote benthic ecosystems.

Description: This open access book presents the results of three years collaboration between earth scientists and data scientists, in developing and applying data science methods for scientific discovery. The book will be highly beneficial for other researchers at senior and graduate level, interested in applying visual data exploration, computational approaches and scientifc workflows.

Description: Modern digital scientific workflows - often implying Big Data challenges - require data infrastructures and innovative data science methods across disciplines and technologies. Diverse activities within and outside HGF deal with these challenges, on all levels. The series of Data Science Symposia fosters knowledge exchange and collaboration in the Earth and Environment research community. We invited contributions to the overarching topics of data management, data science and data infrastructures. The series of Data Science Symposia is a joint initiative by the three Helmholtz Centers HZG, AWI and GEOMAR Organization: Hela Mehrtens and Daniela Henkel (GEOMAR)