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  • 1
    Publication Date: 2022-05-25
    Description: Author Posting. © The Authors, 2006. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Continental Shelf Research 26 (2006): 885-901, doi:10.1016/j.csr.2006.01.017.
    Description: The effects of the 1997-98 and 2002-04 El Ni˜no on the upper waters in the con- tinental shelf and slope regions off northwestern Baja California are explored with data from eight cruises taken in late spring from 1998 to 2004 and the summers of 1997 and 1998. Geostrophic velocities were calculated referenced to a specific vol- ume anomaly surface separating the southward flowing California Current waters from the waters advected to the north by the California Undercurrent. The result- ing fields show equatorward flow near the surface except in the summer of 1997, when a poleward jet was found in the upper 40 dbars. This shallow jet advected anomalously warm and salty waters characteristic of the 1997-98 El Ni˜no, with its core found within 20-30 kms from the coast. By spring of 1998, the waters brought into the region by the jet had mixed across the pycnoline with the salty California Undercurrent waters below, resulting in high salinity levels on the density surfaces corresponding to the otherwise fresh California Current waters (25-26¾t). By con- trast, the 2002-04 El Ni˜no stands out for the very fresh and cold waters found on the same density surfaces in late spring of 2003 and 2004, marking a pronounced presence of subarctic waters. The fresh conditions found on the latter years repre- sent a nearshore expresion of the anomalous intrusion of subarctic waters observed 50-150 km from the coast of Southern California and Punta Eugenia, reported from July 2002 until April 2003. Our results suggest that the presence of this intrusion has continued to influence the region at least until May 2004.
    Description: This work was supported by the US NSF (OCE-9986627 and OCE-0083976).
    Keywords: El Nino phenomena ; Coastal currents ; Coastal upwelling ; Hydrography ; California Current System ; Mexico ; Northwestern Baja California ; Geographic bounding coordinates: (33◦00’N, 117◦45’W) – (31◦40’N, 116◦30’W)
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
    Format: 1870213 bytes
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  • 2
    Publication Date: 2022-05-25
    Description: This report is not copyrighted. The definitive version was published in California Cooperative Oceanic Fisheries Investigations Reports 48 (2007): 204-214.
    Description: We compared the NOAA Southwest Fisheries Science Center’s Environmental Research Division (formerly Pacific Fisheries Environmental Laboratory: PFEL) coastal upwelling indices along the northern Baja California coast with those derived from winds measured by coastal meteorological stations and estimated by the QuikSCAT satellite. With the exception of the PFEL series at 33°N, the three data sets compare reasonably well, having similar typical year patterns, correlations 〉0.6, and significant coherences for periods three to five days or longer. By contrast, the seasonal variations, the timing and magnitude of maximum upwelling, and the variability of the PFEL indices at 33°N are significantly different compared to all the other time series, including QuikSCAT at that location. The performance of the QuikSCAT winds close to shore was evaluated using the coastal meteorological station data. Although large root-meansquare (RMS) errors in direction were found for the QuikSCAT winds, both datasets have properties similar to the variance ellipses, and show reasonable coherences for frequencies in the weather band and lower, particularly south of 33°N.
    Description: This project was partially funded by the U.S. National Science Foundation through grants to J. P. and M. L.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 3
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 773-794, doi:10.1175/JPO-D-17-0205.1.
    Description: Fourteen autonomous profiling floats, equipped with CTDs, were deployed in the deep eastern and western basins of the Gulf of Mexico over a four-year interval (July 2011–August 2015), producing a total of 706 casts. This is the first time since the early 1970s that there has been a comprehensive survey of water masses in the deep basins of the Gulf, with better vertical resolution than available from older ship-based surveys. Seven floats had 14-day cycles with parking depths of 1500 m, and the other half from the U.S. Argo program had varying cycle times. Maps of characteristic water masses, including Subtropical Underwater, Antarctic Intermediate Water (AAIW), and North Atlantic Deep Water, showed gradients from east to west, consistent with their sources being within the Loop Current (LC) and the Yucatan Channel waters. Altimeter SSH was used to characterize profiles being in LC or LC eddy water or in cold eddies. The two-layer nature of the deep Gulf shows isotherms being deeper in the warm anticyclonic LC and LC eddies and shallower in the cold cyclones. Mixed layer depths have an average seasonal signal that shows maximum depths (~60 m) in January and a minimum in June–July (~20 m). Basin-mean steric heights from 0–50-m dynamic heights and altimeter SSH show a seasonal range of ~12 cm, with significant interannual variability. The translation of LC eddies across the western basin produces a region of low homogeneous potential vorticity centered over the deepest part of the western basin.
    Description: The authors were supported by the Department of the Interior, Bureau of Ocean Energy Management (BOEM), Contract M08PC20043 to Leidos, Inc., Raleigh, North Carolina.
    Description: 2018-10-04
    Keywords: Eddies ; Mixing ; Potential vorticity ; Surface layer ; Water masses
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 4
    Publication Date: 2022-05-25
    Description: Author Posting. © University of Miami - Rosenstiel School of Marine and Atmospheric Science, 2011. This article is posted here by permission of University of Miami - Rosenstiel School of Marine and Atmospheric Science for personal use, not for redistribution. The definitive version was published in Bulletin of Marine Science 87 (2011): 275-299, doi:10.5343/bms.2010.1022.
    Description: Barnacles are often abundant on roots and branches of mangrove trees in tidal channels and coastal lagoons of the Pacific coast of Panama. Yet, in some coastal lagoons, barnacles are absent. We investigated pre- and post-settlement factors that affect barnacle distributions in two adjacent coastal lagoons in Bahía Honda, Panama, one with moderate to large barnacle populations, and the other with nearly non-existent populations. Although mean barnacle recruitment was higher on mangrove root segments during the dry season (December-April) than in the wet season (May-November), it was not significantly different between the two coastal lagoons. The coastal lagoon with fewer barnacles is considered an estuary, with high freshwater flow and low salinities (0.1) during the wet season that were lethal to barnacle nauplii and cyprids. Furthermore, coastal water was not observed to enter the lagoon, even during flood tides. In contrast, more barnacles were found in the lagoon with higher salinities (8.5). During the dry season, freshwater flow was greatly reduced in both lagoons, resulting in a similar salinity range (22-33). We conclude that the lack of barnacles in the estuarine coastal lagoon is largely due to high flushing rates and low salinities that reduce larval concentrations during the wet season. Moreover, low adult abundance in the lagoon's interior may further reduce larval supply and settlement.
    Description: Finally, we would like to thank the Ocean Life Institute of the Woods Hole Oceanographic Institution for funding to JP to complete research in the Liquid Jungle Lab.
    Description: 2014-07-01
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 5
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 511-529, doi:10.1175/JPO-D-17-0140.1.
    Description: The large-scale circulation of the bottom layer of the Gulf of Mexico is analyzed, with special attention to the historically least studied western basin. The analysis is based on 4 years of data collected by 158 subsurface floats parked at 1500 and 2500 m and is complemented with data collected by current meter moorings in the western basin during the same period. Three main circulation patterns stand out: a cyclonic boundary current, a cyclonic gyre in the abyssal plain, and the very high eddy kinetic energy observed in the eastern Gulf. The boundary current and the cyclonic gyre appear as distinct features, which interact in the western tip of the Yucatan shelf. The persistence and continuity of the boundary current is addressed. Although high variability is observed, the boundary flow serves as a pathway for water to travel around the western basin in approximately 2 years. An interesting discovery is the separation of the boundary current over the northwestern slope of the Yucatan shelf. The separation and retroflection of the along-slope current appears to be a persistent feature and is associated with anticyclonic eddies whose genesis mechanism remains to be understood. As the boundary flow separates, it feeds into the westward flow of the deep cyclonic gyre. The location of this gyre—named the Sigsbee Abyssal Gyre—coincides with closed geostrophic contours, so eddy–topography interaction via bottom form stresses may drive this mean flow. The contribution to the cyclonic vorticity of the gyre by modons traveling under Loop Current eddies is discussed.
    Description: This work was supported by the Bureau of Ocean Energy Management (BOEM) under Contract M10PC00112 assigned to Leidos, Inc.
    Keywords: Seas/gulfs/bays ; Abyssal circulation ; Boundary currents ; Lagrangian circulation/transport ; Large-scale motions ; Trajectories
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 6
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 2703-2719, doi:10.1175/JPO-D-17-0245.1.
    Description: A new set of deep float trajectory data collected in the Gulf of Mexico from 2011 to 2015 at 1500- and 2500-m depths is analyzed to describe mesoscale processes, with particular attention paid to the western Gulf. Wavelet analysis is used to identify coherent eddies in the float trajectories, leading to a census of the basinwide coherent eddy population and statistics of the eddies’ kinematic properties. The eddy census reveals a new formation region for anticyclones off the Campeche Escarpment, located northwest of the Yucatan Peninsula. These eddies appear to form locally, with no apparent direct connection to the upper layer. Once formed, the eddies drift westward along the northern edge of the Sigsbee Abyssal Gyre, located in the southwestern Gulf of Mexico over the abyssal plain. The formation mechanism and upstream sources for the Campeche Escarpment eddies are explored: the observational data suggest that eddy formation may be linked to the collision of a Loop Current eddy with the western boundary of the Gulf. Specifically, the disintegration of a deep dipole traveling under the Loop Current eddy Kraken, caused by the interaction with the northwestern continental slope, may lead to the acceleration of the abyssal gyre and the boundary current in the Bay of Campeche region.
    Description: The authors were supported by the Department of the Interior, Bureau of Ocean Energy Management (BOEM), Contract M10PC00112 to Leidos, Inc., Raleigh, North Carolina.
    Description: 2019-05-07
    Keywords: Abyssal circulation ; Currents ; Eddies ; Mesoscale processes ; Trajectories ; In situ oceanic observations
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 7
    Publication Date: 2023-03-08
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Meunier, T., Pérez-Brunius, P., & Bower, A. Reconstructing the three-dimensional structure of loop current rings from satellite altimetry and in situ data using the gravest empirical modes method. Remote Sensing, 14(17), (2022): 4174, https://doi.org/10.3390/rs14174174.
    Description: The three-dimensional structure of Gulf of Mexico’s warm-core rings, detaching from the Loop Current, is investigated using satellite altimetry and a large set of ARGO float profiles. Reconstruction of the Loop Current rings (LCRs) vertical structure from sea surface height observations is made possible by the use of the gravest empirical modes method (GEM). The GEMs are transfer functions that associate a value of temperature and salinity for each variable pair {dynamic height; pressure}, and are computed by estimating an empirical relationship between dynamic height and the vertical thermohaline structure of the ocean. Between 1993 and 2021, 40 LCRs were detected in the altimetry and their three-dimensional thermohaline structure was reconstructed, as well as a number of dynamically relevant variables (geostrophic and cyclogeostrophic velocity, relative vorticity, potential vorticity, available potential energy and kinetic energy density, etc.). The structure of a typical LCR was computed by fitting an analytical stream function to the LCRs dynamic height signature and reconstructing its vertical structure with the GEM. The total heat and salt contents and energy of each LCR were computed and their cumulative effect on the Gulf of Mexico’s heat, salt and energy balance is discussed. We show that LCRs have a dramatic impact on these balances and estimate that residual surface heat fluxes of −13 W m−2 are necessary to compensate their heat input, while the fresh water outflow of the Mississippi river approximately compensates for their salt excess input. An average energy dissipation of O [10−10–10−9] W kg−1 would be necessary to balance their energy input.
    Description: This work is part of the LC-floats project, funded by the US National Academy of Sciences through the Understanding Gulf Ocean Systems grant 2000010488.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 8
    Publication Date: 2022-12-01
    Description: This is the final data report for all acoustically-tracked subsurface RAFOS floats deployed for the “Deep Water Dispersion Experiment: RAFOS Float Study in Support of Analysis of Possible Consequences of Large Scale Oil-Spills under Various Scenarios” (DWDE). This study is part of the larger program “Deep and Shallow Particle Dispersion and Biological Connectivity over the Continental Slope in the Western Gulf of Mexico”, of the Gulf of Mexico Research Consortium (CIGoM). The objective of the DWDE project was to measure and evaluate the ocean circulation at various depths in order to estimate the rates and pathways by which a passive tracer (e.g. pollutant, nutrients, etc.) would spread. The experiment consisted of the deployment 93 RAFOS floats and five sound source moorings (needed for tracking the floats underwater) over the course of five cruises, between June 2016 and January 2019, in the Perdido region of the Gulf of Mexico. The floats were deployed nearly simultaneously at stacked depths of 300 and 1500 dbar, in sets of 2-4 instruments per station, for calculating dispersion statistics. Mission lengths for the floats were set to ~12 to 18 months. Included in this report are cruise summaries, statistics and notes on sound source and float performance, sound source drift calculations, description of the RAFOS float data processing steps, and figures.
    Description: Funding was provided by the Mexican National Council for Science and Technology - Mexican Ministry of Energy - Hydrocarbon Fund, project 201441. This work was completed through a contract by the Center for Scientific Research and Higher Education at Ensenada (CICESE) under Grant No. 188355 to the Woods Hole Oceanographic Institution.
    Keywords: RAFOS ; Trajectory ; Gulf of Mexico ; Deep Water Dispersion Experiment ; Ocean circulation
    Repository Name: Woods Hole Open Access Server
    Type: Technical Report
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  • 9
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(4), (2020): 1045-1064, doi:10.1175/JPO-D-19-0137.1.
    Description: Three simulations of the circulation in the Gulf of Mexico (the “Gulf”) using different numerical general circulation models are compared with results of recent large-scale observational campaigns conducted throughout the deep (〉1500 m) Gulf. Analyses of these observations have provided new understanding of large-scale mean circulation features and variability throughout the deep Gulf. Important features include cyclonic flow along the continental slope, deep cyclonic circulation in the western Gulf, a counterrotating pair of cells under the Loop Current region, and a cyclonic cell to the south of this pair. These dominant circulation features are represented in each of the ocean model simulations, although with some obvious differences. A striking difference between all the models and the observations is that the simulated deep eddy kinetic energy under the Loop Current region is generally less than one-half of that computed from observations. A multidecadal integration of one of these numerical simulations is used to evaluate the uncertainty of estimates of velocity statistics in the deep Gulf computed from limited-length (4 years) observational or model records. This analysis shows that the main deep circulation features identified from the observational studies appear to be robust and are not substantially impacted by variability on time scales longer than the observational records. Differences in strengths and structures of the circulation features are identified, however, and quantified through standard error analysis of the statistical estimates using the model solutions.
    Description: This work was supported by the Gulf Research Program of the National Academy of Sciences under Awards 2000006422 and 2000009966. The content is solely the responsibility of the authors and does not necessarily represent the official views of the Gulf Research Program or the National Academy of Sciences. The authors acknowledge the GLORYS project for providing the ocean reanalysis data used in the ROMS simulation. GLORYS is jointly conducted by MERCATOR OCEAN, CORIOLIS, and CNRS/INSU. Installation, recovery, data acquisition, and processing of the CANEK group current-meter moorings were possible because of CICESE-PetróleosMexicanos Grant PEP-CICESE 428229851 and the dedicated work of the crew of the B/O Justo Sierra and scientists of the CANEK group. The authors thank Dr. Aljaz Maslo, CICESE, for assistance with analysis of model data. The Bureau of Ocean Energy Management (BOEM), U.S. Dept. of the Interior, provided funding for the Lagrangian Study of the Deep Circulation in the Gulf of Mexico and the Observations and Dynamics of the Loop Current study. HYCOM simulation data are available from the HYCOM data server (https://www.hycom.org/data/goml0pt04/expt-02pt2), MITgcm data are available from the ECCO data server (http://ecco.ucsd.edu/gom_results2.html), and the ROMS simulation data are available from GRIIDC (NA.x837.000:0001).
    Keywords: Ocean circulation ; Abyssal circulation ; Bottom currents/bottom water ; Eddies ; Ocean models
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 10
    Publication Date: 2022-05-27
    Description: Author Posting. © American Geophysical Union, 2021. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 126(10),(2021): e2021JC017375.,https://doi.org/10.1029/2021JC017375.
    Description: The Deep Water Horizon oil spill dramatically impacted the Gulf of Mexico from the seafloor to the surface. While dispersion of contaminants at the surface has been extensively studied, little is known about deep water dispersion properties. This study describes the results of the Deep Water Dispersion Experiment (DWDE), which consisted of the release of surface drifters and acoustically tracked RAFOS floats drifting at 300 and 1,500 dbar in the Gulf of Mexico. We show that surface diffusivity is elevated and decreases with depth: on average, diffusivity at 1,500 dbar is 5 times smaller than at the surface, suggesting that the dispersion of contaminants at depth is a significantly slower process than at the surface. This study also examines the turbulent regimes driving the dispersion, although conflicting evidences and large uncertainties do not allow definitive conclusions. At all depths, while the growth of dispersion and kurtosis with time supports the possibility of an exponential regime at very short time scales, indicating that early dispersion is nonlocal, finite size Lyapunov exponents support the hypothesis of local dispersion, suggesting that eddies of size comparable to the initial separation (6 km), may dominate the early dispersion. At longer time scales, the quadratic growth of dispersion is indicative of a ballistic regime, where a mean shear flow would be the dominating process. Examination of the along- and across-bathymetry components of float velocities supports the idea that boundary currents could be the source for this shear dispersion.
    Description: This research has been funded by the Mexican National Council for Science and Technology - Mexican Ministry of Energy - Hydrocarbon Fund, project 201441. This is a contribution of the Gulf of Mexico Research Consortium (CIGoM).
    Description: 2022-03-18
    Keywords: Lagrangian experiment ; turbulence ; RAFOS ; relative dispersion ; Gulf of Mexico ; Deep Water Dispersion
    Repository Name: Woods Hole Open Access Server
    Type: Article
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