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  • Elsevier  (7)
  • PERGAMON-ELSEVIER SCIENCE LTD  (6)
  • COPERNICUS GESELLSCHAFT MBH  (2)
  • 1
    Publication Date: 2019-02-01
    Description: Time-series studies of arctic marine ecosystems are rare. This is not surprising since polar regions are largely only accessible by means of expensive modern infrastructure and instrumentation. In 1999, the Alfred Wegener Institute, Helmholtz-Centre for Polar and Marine Research (AWI) established the LTER (Long-Term Ecological Research) observatory HAUSGARTEN crossing the Fram Strait at about 79° N. Multidisciplinary investigations covering all parts of the open-ocean ecosystem are carried out at a total of 21 permanent sampling sites in water depths ranging between 250 and 5500 m. From the outset, repeated sampling in the water column and at the deep seafloor during regular expeditions in summer months was complemented by continuous year-round sampling and sensing using autonomous instruments in anchored devices (i.e., moorings and free-falling systems). The central HAUSGARTEN station at 2500 m water depth in the eastern Fram Strait serves as an experimental area for unique biological in situ experiments at the seafloor, simulating various scenarios in changing environmental settings. Long-term ecological research at the HAUSGARTEN observatory revealed a number of interesting temporal trends in numerous biological variables from the pelagic system to the deep seafloor. Contrary to common intuition, the entire ecosystem responded exceptionally fast to environmental changes in the upper water column. Major variations were associated with a Warm-Water-Anomaly evident in surface waters in eastern parts of the Fram Strait between 2005 and 2008. However, even after 15 years of intense time-series work at HAUSGARTEN, we cannot yet predict with complete certainty whether these trends indicate lasting alterations due to anthropologically-induced global environmental changes of the system, or whether they reflect natural variability on multiyear time-scales, for example, in relation to decadal oscillatory atmospheric processes.
    Type: Article , PeerReviewed
    Format: text
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  • 2
    Publication Date: 2019-09-23
    Description: Highlights • Marine Image Annotation Software (MIAS) are used to assist annotation of underwater imagery. • We compare 23 MIAS assisting human annotation including some that include automated annotation. • MIAS can run in real time (50%), allow posterior annotation (95%), and interact with databases and data flows (44%). • MIAS differ in data input/output and display, customization, image analysis and re-annotation. • We provide important considerations when selecting UIAS, and outline future trends. Abstract Given the need to describe, analyze and index large quantities of marine imagery data for exploration and monitoring activities, a range of specialized image annotation tools have been developed worldwide. Image annotation - the process of transposing objects or events represented in a video or still image to the semantic level, may involve human interactions and computer-assisted solutions. Marine image annotation software (MIAS) have enabled over 500 publications to date. We review the functioning, application trends and developments, by comparing general and advanced features of 23 different tools utilized in underwater image analysis. MIAS requiring human input are basically a graphical user interface, with a video player or image browser that recognizes a specific time code or image code, allowing to log events in a time-stamped (and/or geo-referenced) manner. MIAS differ from similar software by the capability of integrating data associated to video collection, the most simple being the position coordinates of the video recording platform. MIAS have three main characteristics: annotating events in real time, in posteriorly to annotation and interact with a database. These range from simple annotation interfaces, to full onboard data management systems, with a variety of toolboxes. Advanced packages allow to input and display of data from multiple sensors or multiple annotators via intranet or internet. Posterior human-mediated annotation often include tools for data display and image analysis, e.g. length, area, image segmentation, point count; and in a few cases the possibility of browsing and editing previous dive logs or to analyze annotation data. The interaction with a database allows the automatic integration of annotations from different surveys, repeated annotation and collaborative annotation of shared datasets, browsing and querying of data. Progress in the field of automated annotation is mostly in post processing, for stable platforms or still images. Integration into available MIAS is currently limited to semi-automated processes of pixel recognition through computer-vision modules that compile expert-based knowledge. Important topics aiding the choice of a specific software are outlined, the ideal software is discussed and future trends are presented.
    Type: Article , PeerReviewed
    Format: text
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  • 3
    Publication Date: 2017-06-01
    Description: Given the need to describe, analyze and index large quantities of marine imagery data for exploration and monitoring activities, a range of specialized image annotation tools have been developed worldwide. Image annotation - the process of transposing objects or events represented in a video or still image to the semantic level, may involve human interactions and computer-assisted solutions. Marine image annotation software (MIAS) have enabled over 500 publications to date. We review the functioning, application trends and developments, by comparing general and advanced features of 23 different tools utilized in underwater image analysis. MIAS requiring human input are basically a graphical user interface, with a video player or image browser that recognizes a specific time code or image code, allowing to log events in a time-stamped (and/or geo-referenced) manner. MIAS differ from similar software by the capability of integrating data associated to video collection, the most simple being the position coordinates of the video recording platform. MIAS have three main characteristics: annotating events in real time, in posteriorly to annotation and interact with a database. These range from simple annotation interfaces, to full onboard data management systems, with a variety of toolboxes. Advanced packages allow to input and display of data from multiple sensors or multiple annotators via intranet or internet. Posterior human-mediated annotation often include tools for data display and image analysis, e.g. length, area, image segmentation, point count; and in a few cases the possibility of browsing and editing previous dive logs or to analyze annotation data. The interaction with a database allows the automatic integration of annotations from different surveys, repeated annotation and collaborative annotation of shared datasets, browsing and querying of data. Progress in the field of automated annotation is mostly in post processing, for stable platforms or still images. Integration into available MIAS is currently limited to semi-automated processes of pixel recognition through computer-vision modules that compile expert-based knowledge. Important topics aiding the choice of a specific software are outlined, the ideal software is discussed and future trends are presented.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 4
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    PERGAMON-ELSEVIER SCIENCE LTD
    In:  EPIC3Deep-Sea Research Part I-Oceanographic Research Papers, PERGAMON-ELSEVIER SCIENCE LTD, 122, pp. 81-94, ISSN: 0967-0637
    Publication Date: 2017-04-27
    Description: Established in the Fram Strait in 1999, the LTER (Long-Term Ecological Research) observatory HAUSGARTEN enables us to study changes on the deep Arctic seafloor. Repeated deployments of a towed camera system (Ocean Floor Observation System) along the same tracks allowed us to build a time series longer than a decade (2004 - 2015). Here, we present the first time-series results from a northern and the southernmost station of the observatory (N3 and S3, ~2650m and 2350m depth respectively) obtained via the analysis of still imagery. We assess temporal variability in community structure, megafaunal densities and diversity, and use a range of biotic and abiotic factors to explain the patterns observed. There were significant temporal differences in megafaunal abundances, diversity and abiotic factors at both stations. A particularly high increase in megafaunal abundance was recorded at N3 from 12.08 (±0.39; 2004) individuals m-2 to 35.21 (±0.97; 2007) ind. m-2 alongside a ten-fold increase in (drop-)stones. At S3, megafaunal densities peaked in 2015 (22.74 ±0.61 ind. m-2) after an increasing trend since 2004 (12.44 ±0.32 ind. m-2). Holothurians showed particularly striking temporal differences: densities of the small sea cucumber Elpidia heckeri densities rose ten-fold from 0.31 ind. m-2 (±0.04; 2004) to 3.74 ind. m-2 (±0.14; 2015) at S3, coinciding with a sustained increase in phytodetritial matter (chloroplastic pigment equivalents) at the seafloor. Initially entirely absent from N3, densities of the larger holothurian Kolga hyalina peaked in 2007 (5.87 ±0.22 ind. m-2) and declined continuously since then. Overall diversity (γ) increased at both stations over the course of the study, however, with varying contributions of α and β diversities. Our results highlight the importance of time-series studies as megafaunal community composition is characterised by continuous changes. This indicates that epibenthic communities from the deep seafloor are reactive and dynamic, with no “null” community state. To continue to monitor them is therefore crucial in understanding natural and anthropogenic impacts in an area exposed to the effects of climate change.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Format: application/pdf
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  • 5
    Publication Date: 2017-01-20
    Description: Although the Arctic covers 6% of our planet’s surface and plays a key role in the Earth’s climate it remains one of the least explored ecosystems. The global change induced decline of sea ice has led to increasing anthropogenic presence in the Arctic Ocean. Exploitation of its resources is already underway, and Arctic waters are likely important future shipping lanes as indicated by already increasing numbers of fishing vessels, cruise liners and hydrocarbon prospecting in the area over the past decade. Global estimates of plastic entering the oceans currently exceed results based on empirical evidence by up to three orders of magnitude highlighting that we have not yet identified some of the major sinks of plastic in our oceans. Fragmentation into microplastics could explain part of the discrepancy. Indeed, microplastics were identified from numerous marine ecosystems globally, including the Arctic. Here, we analysed horizons of ice cores from the western and eastern Fram Strait by focal plane array based micro-Fourier transform infrared spectroscopy to assess if sea ice is a sink of microplastic. Ice cores were taken from land-locked and drifting sea ice to distinguish between local entrainment of microplastics vs long-distance transport. Mean concentrations of 2 x 106 particles m-3 in pack ice and 6 x 105 particles m-3 in land-locked ice were detected (numbers of fibers will soon be added). Eleven different polymer types were identified; polyethylene (PE) was the most abundant one. Preliminary results from four further ice cores from the central Arctic range in a similar order but the microplastics composition was very different. Calculation of drift trajectories by back-tracking of the ice floes sampled indicates multiple source areas, which explains the differences in the microplastic composition. Preliminary analysis of snow samples taken from ice floes in the Fram Strait showed numerous fibers of yet unknown but most likely anthropogenic origin indicating atmospheric fallout as a possible pathway. Our results exceed concentrations from the North Pacific by several orders of magnitudes. This can be explained partly by the process of ice formation, during which (organic) particles tend to concentrate by 1-2 orders of magnitude compared with ambient seawater. However, the magnitude of the difference indicates that Arctic sea ice is a temporal sink for microplastics. Increasing quantities of small plastic litter items on the seafloor nearby, which is located in the marginal ice zone corroborate the notion that melting sea ice releases entrained plastic particles and that sea ice acts as a vector of transport both horizontally and vertically to underlying ecosystem compartments.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev
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  • 6
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    Elsevier
    In:  EPIC3Reference Module in Earth Systems and Environmental Sciences, Elsevier
    Publication Date: 2017-02-14
    Description: Vast quantities of plastics are accumulating in the oceans. At sea, plastics interact with marine biota often with deleterious consequences for organisms and habitats. As users of marine food resources and ecosystem services humans are also affected by marine plastic litter. Economic, social and health implications necessitate decisive action to manage this growing environmental problem at a global scale. Accordingly, legislative and technological instruments have been implemented to reduce the amounts of marine plastic debris. Promising strategies to reduce the human plastic footprint in the oceans must involve the minimization of plastic discharges into the marine environment.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , notRev
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  • 7
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    Elsevier
    In:  EPIC3Fate and Impact of Microplastics in Marine Ecosystems, MICRO 2016, Amsterdam, Elsevier, 2 p., pp. 106-107
    Publication Date: 2017-01-20
    Description: For many years, the pollution of the oceans with marine litter received only little attention from the public although the global plastic production has grown steadily. However, since the “discovery” of the oceanic garbage patches and microplastics the littering of the oceans has become a hot topic, which is reflected in strong recent increases in the number of publications. Despite growing research efforts many questions remain unanswered and the new wealth of information does not readily transpire to the general public, which is left unsettled. For example, it is still unclear what the overall extent of ocean pollution is, or how the enormous amounts of oceanic plastics affect marine life and ecosystems. To overcome this uncertainty and make best use of the existing knowledge, we currently develop an online portal for marine litter and microplastic pollution named LITTERBASE. As of early 2017, LITTERBASE will provide access to the current state of understanding of marine litter and microplastics to the general public and stakeholders. Published records of marine litter and microplastics and their impact on marine life will be compiled in a database. The regularly updated information will be displayed in distribution maps and other graphs in an interactive online portal. In the long run, data from citizen scientists may also be integrated into these infographs.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev
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  • 8
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    Elsevier
    In:  EPIC3Fate and Impact of Microplastics in Marine Ecosystems, MICRO 2016, Amsterdam, Elsevier, pp. 177-181
    Publication Date: 2017-04-25
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev
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  • 9
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    PERGAMON-ELSEVIER SCIENCE LTD
    In:  EPIC3Deep-Sea Research Part I-Oceanographic Research Papers, PERGAMON-ELSEVIER SCIENCE LTD, 108, pp. 58-72, ISSN: 0967-0637
    Publication Date: 2017-06-07
    Description: The LTER (Long-Term Ecological Research) observatory HAUSGARTEN, in the eastern Fram Strait, provides us the unique ability to study the composition of benthic megafaunal communities through the analysis of seafloor photographs. This, in combination with extensive sampling campaigns, which have yielded a unique data set on faunal, bacterial, biogeochemical and geological properties, as well as on hydrography and sedimentation patterns, allows us to address the question of why variations in megafaunal community structure and species distribution exist within regional (60-110 km) and local (〈4 km) scales. Here, we present first results from the latitudinal HAUSGARTEN transect, consisting of three different stations (N3, HG-IV, S3) between 78°30’N and 79°45’N (2500 m depth), obtained via the analysis of images acquired by a towed camera (Ocean Floor Observation System) in 2011. We assess variability in megafaunal densities, species composition and diversity as well as biotic and biogenic habitat features, which may cause the patterns observed. While there were significant regional differences in megafaunal composition and densities between the stations (N3 = 26.74 ±0.63; HG-IV = 11.21 ±0.25; S3 = 18.34 ±0.39 individuals m-2), significant local differences were only found at HG-IV. Regional-scale variations may be due to the significant differences in ice coverage at each station as well as the different quantities of protein available, whereas local-scale differences at HG-IV may be a result of variation in bottom topography.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 10
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    PERGAMON-ELSEVIER SCIENCE LTD
    In:  EPIC3Marine Pollution Bulletin, PERGAMON-ELSEVIER SCIENCE LTD, 64(12), pp. 2734-2741, ISSN: 0025-326X
    Publication Date: 2014-10-07
    Description: Although recent research has shown that marine litter has made it even to the remotest parts of our planet, little information is available about temporal trends on the deep ocean floor. To quantify litter on the deep seafloor over time, we analysed images from the HAUSGARTEN observatory (79°N) taken in 2002, 2004, 2007, 2008 and 2011 (2500m depth). Our results indicate that litter increased from 3,635 to 7,710 items km-2 between 2002 and 2011 and reached densities similar to those reported from a canyon near the Portuguese capital Lisboa. Plastic constituted the majority of litter (59%) followed by a black fabric (11%) and cardboard/paper (7%). 67% of the litter was entangled or colonised by invertebrates such as sponges (41%) or sea anemones (15%). The changes in litter could be an indirect consequence of the receding sea ice, which opens the Arctic Ocean to the impacts of man’s activities.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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