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  • 1
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2004. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 31 (2004): L22307, doi:10.1029/2004GL021052.
    Description: We report on near-bottom waves of elevation with amplitude nearly half the 25 m water column, very steep, and propagating into a sheared turbulent wave-guide. The waves contained trapped cores transporting parcels of water shoreward. These large waves depart strongly from weakly-nonlinear and weakly-nonhydrostatic conditions and challenge established paradigms. They can also represent an important factor in the across-shore transport of plankton and contaminants.
    Description: Funding provided by ONR, grants N00014-01-1-0172 and N00014-03-1-0553.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2008. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 113 (2008): C08031, doi:10.1029/2008JC004726.
    Description: The shoaling of the nonlinear internal tide in Massachusetts Bay is studied with a fully nonlinear and nonhydrostatic model. The results are compared with current and temperature observations obtained during the August 1998 Massachusetts Bay Internal Wave Experiment and observations from a shorter experiment which took place in September 2001. The model shows how the approaching nonlinear undular bore interacts strongly with a shoaling bottom, offshore of where KdV theory predicts polarity switching should occur. It is shown that the shoaling process is dominated by nonlinearity, and the model results are interpreted with the aid of a two-layer nonlinear but hydrostatic model. After interacting with the shoaling bottom, the undular bore emerges on the shallow shelf inshore of the 30-m isobath as a nonlinear internal tide with a range of possible shapes, all of which are found in the available observational record.
    Description: A. Scotti began this project as a Postdoctoral Scholar at the Woods Hole Oceanographic Institution, with support from the Johnson Foundation and the USGS. Further support was provided to Scotti by the Office of Naval Research under grants N00014-01-1-0172, N00014-03-1-0553, and N00014-05-1-0361, and by NSF under grant OCE 07-29636. R. Beardsley was supported by ONR under grants N00014-98-1- 0059, N00014-00-1-0210, and the Smith Chair in Coastal Physical Oceanography. J. Pineda was supported by ONR under grants N00014-01-1-0172, and by a WHOIOcean Life Institute Fellowship.
    Keywords: Nonlinear internal waves ; Internal tide ; Shoaling
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 3
    Publication Date: 2022-05-25
    Description: Author Posting. © Inter-Research, 2007. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Marine Ecology Progress Series 342 (2007): 177-190, doi:10.3354/meps342177.
    Description: The stage-specific spatial distribution and mortality of Balanus glandula and Chthamalus spp. larvae were assessed with a series of daily vertical plankton tows collected from inner-shelf waters in La Jolla, Southern California, in March 2003. Sampling stations were located within 1.1 km of the shoreline, at depths of 10 to 45 m. For both groups, we observed a spatial segregation of naupliar stages and cyprids, although this pattern was statistically significant for Chthamalus spp. only. Early nauplii (NII and NIII) were more abundant at the inshore stations, whereas later stages (NIV to NVI) occurred in greater numbers offshore. Cyprids were consistently more abundant at the inshore station. Such striking differences in the horizontal distributions of late nauplii and cyprids suggest limited dispersal of barnacle larvae in nearshore waters. Particle trajectories computed from current velocities measured in the area indicated that changes in vertical distribution may indeed affect dispersal, and, in some cases, enhance the retention of larvae in shallow, inner-shelf waters. Vertical life tables were used to estimate naupliar mortality rates from pooled daily stage distributions. Average estimates (±SE) for the instantaneous rate of larval mortality in B. glandula (0.33 ± 0.05 larvae d–1) and Chthamalus spp. (0.23 ± 0.03 larvae d–1) were substantially higher than previously assumed for these species. We discuss the implications of limited dispersal and high mortality rates for the exchange of larvae among disjunct populations of intertidal barnacles and other coastal benthic invertebrates.
    Description: This research was supported by a National Science Foundation grant to J.P.
    Keywords: Larval distribution ; Small scale ; Balanus glandula ; Chthamalus spp. ; Dispersal ; Mortality
    Repository Name: Woods Hole Open Access Server
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  • 4
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    Copernicus Publications on behalf of the European Geosciences Union and the American Geophysical Union
    Publication Date: 2022-05-25
    Description: © The Author(s), 2011. This article is distributed under the terms of the Creative Commons Attribution 3.0 License. The definitive version was published in Nonlinear Processes in Geophysics 18 (2011): 71-79, doi:10.5194/npg-18-71-2011.
    Description: The region of the Middle East around the Red Sea (between 32° E and 44° E longitude and 12° N and 28° N latitude) is a currently undocumented hotspot for atmospheric gravity waves (AGWs). Satellite imagery shows evidence that this region is prone to relatively high occurrence of AGWs compared to other areas in the world, and reveals the spatial characteristics of these waves. The favorable conditions for wave propagation in this region are illustrated with three typical cases of AGWs propagating in the lower troposphere over the sea. Using weakly nonlinear long wave theory and the observed characteristic wavelengths we obtain phase speeds which are consistent with those observed and typical for AGWs, with the Korteweg-de Vries theory performing slightly better than Benjamin-Davis-Acrivos-Ono theory as far as phase speeds are concerned. ERS-SAR and Envisat-ASAR satellite data analysis between 1993 and 2008 reveals signatures consistent with horizontally propagating large-scale internal waves. These signatures cover the entire Red Sea and are more frequently observed between April and September, although they also occur during the rest of the year. The region's (seasonal) propagation conditions for AGWs, based upon average vertical atmospheric stratification profiles suggest that many of the signatures identified in the satellite images are atmospheric internal waves.
    Description: This research was conducted with support from KAUST (King Abdullah University for Science and Technology) in collaboration with the Woods Hole Oceanographic Institution, Biology Department. Some support was also provided by a Treaty of Windsor Grant awarded by the British Council (Portugal).
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 5
    Publication Date: 2022-05-25
    Description: Author Posting. © The Author(s), 2012. This is the author's version of the work. It is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Marien Ecology Progress Series 476 (2013): 141-151, doi:10.3354/meps10186.
    Description: Gravid adults of the common intertidal barnacle Semibalanus balanoides (L.) brood fully developed larvae until individuals perceive some cue from the environment that triggers synchronous larval release. The prevailing hypothesis has been that phytoplankton blooms trigger release because they provide a food source for nauplius larvae. Through observations and field experiments, we tested the hypothesis that turbidity from any source, not just phytoplankton blooms, can trigger release. We documented five larval release events at three sites in the northeastern United States. Two events coincided with chlorophyll increases, and all five coincided with turbidity increases. In experiments, the larval release response was equivalent when adults were exposed to diatoms or inert synthetic beads, and it was significantly higher than under exposure to filtered seawater. We also tested the hypothesis that turbidity can decrease the risk of cannibalism for newly-released nauplii. Under experimentally manipulated conditions, adults consumed significantly fewer nauplii in a high-turbidity environment. We suggest that reproduction in this species may have evolved to coincide roughly with the local onset of winter/spring phytoplankton blooms, but the timing of larval release may have been fine-tuned further by cannibalism and predation pressures. The potential for turbid conditions to serve as a refuge for planktonic larvae of other marine organisms merits further investigation.
    Description: Support for this work came from a National Science Foundation Graduate Research Fellowship and a student award from the Coastal Ocean Institute at Woods Hole Oceanographic Institution (both to JG).
    Keywords: Synchrony ; Turbidity ; Reproduction ; Larvae ; Cannibalism ; Barnacles
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
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  • 6
    Publication Date: 2022-05-25
    Description: Author Posting. © The Author(s), 2010. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Journal of Experimental Marine Biology and Ecology 392 (2010): 9-21, doi:10.1016/j.jembe.2010.04.008.
    Description: Marine broadcast spawners have two-phase life cycles, with pelagic larvae and benthic adults. Larval supply and settlement link these two phases and are crucial for the persistence of marine populations. Mainly due to the complexity in sampling larval supply accurately, many researchers use settlement as a proxy for larval supply. Larval supply is a constraining variable for settlement because, without larval supply, there is no settlement. Larval supply and settlement may not be well correlated, however, and settlement may not consistently estimate larval supply. This paper explores the argument that larval supply (i.e., larval abundance near settlement sites) may not relate linearly to settlement. We review the relationship between larval supply and settlement, from estimates and biases in larval supply sampling, to non-behavioral and behavioral components, including small-scale hydrodynamics, competency, gregarious behavior, intensification of settlement, lunar periodicity, predation and cannibalism. Physical and structural processes coupled with behavior, such as small-scale hydrodynamics and intensification of settlement, sometimes result in under- or overestimation of larval supply, where it is predicted from a linear relationship with settlement. Although settlement is a function of larval supply, spatial and temporal processes interact with larval behavior to distort the relationship between larval supply and settlement, and when these distortions act consistently in time and space, they cause biased estimates of larval supply from settlement data. Most of the examples discussed here suggest that behavior is the main source of the decoupling between larval supply and settlement because larval behavior affects the vertical distribution of larvae, the response of larvae to hydrodynamics, intensification of settlement, gregariousness, predation and cannibalism. Thus, larval behavior seems to limit broad generalizations on the regulation of settlement by larval supply. Knowledge of the relationship is further hindered by the lack of a well founded theoretical relationship between the two variables. The larval supply- settlement transition may have strong general consequences for population connectivity, since larval supply is a result of larval transport, and settlement constrains recruitment. Thus, measuring larval supply and settlement effectively allows more accurate quantification and understanding of larval transport, recruitment and population connectivity.
    Description: JP would like to thank WHOI Ocean Life Institute for partial funding. FP’s contribution is based upon research supported by the South African Research Chairs Initiative of the Department of Science and Technology and National Research Foundation.
    Keywords: Invertebrates ; Behavior ; Barnacle
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
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  • 7
    Publication Date: 2022-05-25
    Description: Author Posting. © Inter-Research, 2005. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Marine Ecology Progress Series 302 (2005): 177-185, doi:10.3354/meps302177.
    Description: We evaluated the spatial variability in barnacle settlement at scales of 10s to 100s of meters (among-sites: 300 m; within-site: 30 m) along 1 km of coastline in the Bay of Todos Santos, northern Baja California, Mexico. Settlement of the intertidal barnacles Chthamalus spp. was monitored daily from April 1 to May 10, 2002, and thereafter every other day to September 18, 2002. Concurrently, temperature of the water column was measured every 15 min, and hourly wind speed and direction data were acquired from a nearby site. We identified 12 settlement pulses during our study, with all but 2 pulses showing significant differences in mean settlement at either or both spatial scales. Despite a high variability in numbers, settlement pulses were synchronous between sites. The occurrence of settlement pulses was significantly correlated with a rapid increase in the stratification of nearshore waters, but not correlated with sudden fluctuations in the direction of winds perpendicular to the shore. Sudden changes in the stratification of nearshore waters have been associated with the occurrence of internal tidal bores. Our results suggest that internal motions, more specifically internal tidal bores, could be an important mechanism for the onshore transport of larvae in the Bay of Todos Santos.
    Description: Research was supported in part by AMELIS Project J37689/V from CONACYT and UC MEXUS grants to L.B.L., F.T. and J.P., and the wind measurements were partially supported by the US National Science Foundation.
    Keywords: Synchronous settlement ; Spatial variability ; Intertidal barnacle ; Chthamalus ; Baja California
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 8
    Publication Date: 2022-05-25
    Description: Author Posting. © Inter-Research, 2006. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Marine Ecology Progress Series 320 (2006): 233-237, doi:10.3354/meps320233.
    Description: Recruitment is a key factor in benthic population dynamics, and spatial and temporal processes that affect settlement may determine recruitment; however, temporal processes are not well understood. We tested whether the date that recruits settle is a random sample within the settlement season by measuring daily settlement of the barnacle Semibalanus balanoides throughout the entire settlement season. A total of 2721 barnacle larvae settled during 89 d on 12 quadrats. Individual settlers were tracked to reproductive age (11 mo after settlement); only 8 survived to reproduction. Survivors settled within a narrow 21 d recruitment window, a period shorter than expected by chance. The concept of a recruitment window has broad implications in studying benthic recruitment and population dynamics. Focus on the recruitment window when it is narrow could simplify the study of recruitment, since fewer factors would have to be considered.
    Description: This work was supported by the US NSF (OCE-9986627 and OCE- 0083976).
    Keywords: Recruitment ; Settlement ; Intertidal ecology ; Barnacle
    Repository Name: Woods Hole Open Access Server
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  • 9
    Publication Date: 2022-05-25
    Description: Author Posting. © University of Miami - Rosenstiel School of Marine and Atmospheric Science, 2011. This article is posted here by permission of University of Miami - Rosenstiel School of Marine and Atmospheric Science for personal use, not for redistribution. The definitive version was published in Bulletin of Marine Science 87 (2011): 275-299, doi:10.5343/bms.2010.1022.
    Description: Barnacles are often abundant on roots and branches of mangrove trees in tidal channels and coastal lagoons of the Pacific coast of Panama. Yet, in some coastal lagoons, barnacles are absent. We investigated pre- and post-settlement factors that affect barnacle distributions in two adjacent coastal lagoons in Bahía Honda, Panama, one with moderate to large barnacle populations, and the other with nearly non-existent populations. Although mean barnacle recruitment was higher on mangrove root segments during the dry season (December-April) than in the wet season (May-November), it was not significantly different between the two coastal lagoons. The coastal lagoon with fewer barnacles is considered an estuary, with high freshwater flow and low salinities (0.1) during the wet season that were lethal to barnacle nauplii and cyprids. Furthermore, coastal water was not observed to enter the lagoon, even during flood tides. In contrast, more barnacles were found in the lagoon with higher salinities (8.5). During the dry season, freshwater flow was greatly reduced in both lagoons, resulting in a similar salinity range (22-33). We conclude that the lack of barnacles in the estuarine coastal lagoon is largely due to high flushing rates and low salinities that reduce larval concentrations during the wet season. Moreover, low adult abundance in the lagoon's interior may further reduce larval supply and settlement.
    Description: Finally, we would like to thank the Ocean Life Institute of the Woods Hole Oceanographic Institution for funding to JP to complete research in the Liquid Jungle Lab.
    Description: 2014-07-01
    Repository Name: Woods Hole Open Access Server
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  • 10
    Publication Date: 2022-05-26
    Description: Author Posting. © Association for the Sciences of Limnology and Oceanography, 2013. This article is posted here by permission of Association for the Sciences of Limnology and Oceanography for personal use, not for redistribution. The definitive version was published in Limnology and Oceanography 58 (2013): 1531-1545, doi:10.4319/lo.2013.58.5.1531.
    Description: In summer 2010, a bleaching event decimated the abundant reef flat coral Stylophora pistillata in some areas of the central Red Sea, where a series of coral reefs 100–300 m wide by several kilometers long extends from the coastline to about 20 km offshore. Mortality of corals along the exposed and protected sides of inner (inshore) and mid and outer (offshore) reefs and in situ and satellite sea surface temperatures (SSTs) revealed that the variability in the mortality event corresponded to two spatial scales of temperature variability: 300 m across the reef flat and 20 km across a series of reefs. However, the relationship between coral mortality and habitat thermal severity was opposite at the two scales. SSTs in summer 2010 were similar or increased modestly (0.5°C) in the outer and mid reefs relative to 2009. In the inner reef, 2010 temperatures were 1.4°C above the 2009 seasonal maximum for several weeks. We detected little or no coral mortality in mid and outer reefs. In the inner reef, mortality depended on exposure. Within the inner reef, mortality was modest on the protected (shoreward) side, the most severe thermal environment, with highest overall mean and maximum temperatures. In contrast, acute mortality was observed in the exposed (seaward) side, where temperature fluctuations and upper water temperature values were relatively less extreme. Refuges to thermally induced coral bleaching may include sites where extreme, high-frequency thermal variability may select for coral holobionts preadapted to, and physiologically condition corals to withstand, regional increases in water temperature.
    Description: J.C.B.S. was partially supported by Fundac¸a˜o para a Cieˆncia e a Tecnologia (project PEst-C/MAR/LA0015/2011) and by the European Regional Development Fund through the Operational Competitiveness Programme (National Strategic Reference Framework). Kristen Davis was partially supported by a Woods Hole Oceanographic Institution postdoctoral scholarship. This research was supported by KAUST with awards USA 00002 and KSA 00011.
    Repository Name: Woods Hole Open Access Server
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