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  • 2020-2024  (246)
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  • 2020-2024  (246)
  • 1985-1989
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  • 1
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    Frontiers
    In:  EPIC3Frontiers in Marine Science, Frontiers, 10, pp. 1234776-1234776, ISSN: 2296-7745
    Publication Date: 2024-02-13
    Description: Collaborations between artists and ocean scientists are becoming increasingly frequent. As the UN Ocean Decade (2021-2030) stresses the importance of engaging with the public, there is a growing interest in using art as a tool for communication as well as for scientific exploration and experimentation. This mini-review charts the current academic research on art-science collaborations and the ocean, focusing on literature where artists and scientists work together to produce something based on scientific research. The study finds that these relationships are never apolitical, are complex and develop differently depending on each project. In sum the paper will highlight that although the academic literature is limited, its diversity has the potential to reach numerous academic disciplines and that focusing on process and engagement should be a direction for further research to help broaden the academic reach of these important oceanic knowledges.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
    Format: application/pdf
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  • 2
    Publication Date: 2024-03-11
    Description: Applying molecular methods to fungi establishing lichenized associations with green algae or cyanobacteria has repeatedly revealed the existence of numerous phylogenetic taxa overlooked by classical taxonomic approaches. Here, we report taxonomical conclusions based on multiple species delimitation and validation analyses performed on an eight-locus dataset that includes world-wide representatives of the dolichorhizoid and scabrosoid clades in section Polydactylon of the genus Peltigera. Following the recommendations resulting from a consensus species delimitation approach and additional species validation analysis (BPP) performed in this study, we present a total of 25 species in the dolichorhizoid clade and nine in the scabrosoid clade, including respectively 18 and six species that are new to science and formally described. Additionally, one combination and three varieties (including two new to science) are proposed in the dolichorhizoid clade. The following 24 new species are described: P. appalachiensis, P. asiatica, P. borealis, P. borinquensis, P. chabanenkoae, P. clathrata, P. elixii, P. esslingeri, P. flabellae, P. gallowayi, P. hawaiiensis, P. holtanhartwigii, P. itatiaiae, P. hokkaidoensis, P. kukwae, P. massonii, P. mikado, P. nigriventris, P. orientalis, P. rangiferina, P. sipmanii, P. stanleyensis, P. vitikainenii and P. willdenowii; the following new varieties are introduced: P. kukwae var. phyllidiata and P. truculenta var. austroscabrosa ; and the following new combination is introduced: P. hymenina var. dissecta. Each species from the dolichorhizoid and scabrosoid clades is morphologically and chemically described, illustrated, and characterised with ITS sequences. Identification keys are provided for the main biogeographic regions where species from the two clades occur. Morphological and chemical characters that are commonly used for species identification in the genus Peltigera cannot be applied to unambiguously recognise most molecularly circumscribed species, due to high variation of thalli formed by individuals within a fungal species, including the presence of distinct morphs in some cases, or low interspecific variation in others. The four commonly recognised morphospecies: P. dolichorhiza, P. neopolydactyla, P. pulverulenta and P. scabrosa in the dolichorhizoid and scabrosoid clades represent species complexes spread across multiple and often phylogenetically distantly related lineages. Geographic origin of specimens is often helpful for species recognition; however, ITS sequences are frequently required for a reliable identification.
    Keywords: cryptic species ; identification key ; new taxa ; Peltigerales ; species delimitation
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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  • 3
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    Oxford University Press (OUP)
    In:  EPIC3ICES Journal of Marine Science, Oxford University Press (OUP), ISSN: 1054-3139
    Publication Date: 2023-11-23
    Description: 〈jats:title〉Abstract〈/jats:title〉 〈jats:p〉The North Sea (NS) is changing rapidly. Temporal variations in fishing intensity and eutrophic conditions, along with the ongoing impact of climate change, act in synergy resulting in modifications in marine communities. Although zooplankton has been extensively investigated, studies often ignore the large-sized meso- and macro-zooplankton (>500 µm), including holoplankton and meroplankton taxa. Here, we examined changes in abundances and community structure of these organisms between 1975 and 2018, using univariate and multivariate analysis, at different taxonomic levels. Abrupt changes in the abundances of (sub)communities occurred during different time periods and resulted in a significant restructuration of the entire community in 2006. These changes were consistent with the regime shifts reported in the NS and were a consequence of the environmental pressures on the whole community or on specific subcommunities. In the long term, the community shifted from higher abundances of hydrozoans and holoplankton taxa to an increasing abundance of decapods. Furthermore, we reveal the environmental variables that most explain the variability in the community dynamics, highlighting the importance of temperature and top-down processes. Our study underlines the relevance of investigations at different taxonomic levels, which elucidates how distinct responses to environmental changes ultimately shape the entire community structure.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 4
    Publication Date: 2024-04-22
    Description: The Global Consortium for the Classification of Fungi and fungus-like taxa is an international initiative of more than 550 mycologists to develop an electronic structure for the classification of these organisms. The members of the Consortium originate from 55 countries/regions worldwide, from a wide range of disciplines, and include senior, mid-career and early-career mycologists and plant pathologists. The Consortium will publish a biannual update of the Outline of Fungi and funguslike taxa, to act as an international scheme for other scientists. Notes on all newly published taxa at or above the level of species will be prepared and published online on the Outline of Fungi website (https://www.outlineoffungi.org/), and these will be finally published in the biannual edition of the Outline of Fungi and fungus-like taxa. Comments on recent important taxonomic opinions on controversial topics will be included in the biannual outline. For example, ‘to promote a more stable taxonomy in Fusarium given the divergences over its generic delimitation’, or ‘are there too many genera in the Boletales?’ and even more importantly, ‘what should be done with the tremendously diverse ‘dark fungal taxa?’ There are undeniable differences in mycologists’ perceptions and opinions regarding species classification as well as the establishment of new species. Given the pluralistic nature of fungal taxonomy and its implications for species concepts and the nature of species, this consortium aims to provide a platform to better refine and stabilise fungal classification, taking into consideration views from different parties. In the future, a confidential voting system will be set up to gauge the opinions of all mycologists in the Consortium on important topics. The results of such surveys will be presented to the International Commission on the Taxonomy of Fungi (ICTF) and the Nomenclature Committee for Fungi (NCF) with opinions and percentages of votes for and against. Criticisms based on scientific evidence with regards to nomenclature, classifications, and taxonomic concepts will be welcomed, and any recommendations on specific taxonomic issues will also be encouraged; however, we will encourage professionally and ethically responsible criticisms of others’ work. This biannual ongoing project will provide an outlet for advances in various topics of fungal classification, nomenclature, and taxonomic concepts and lead to a community-agreed classification scheme for the fungi and fungus-like taxa. Interested parties should contact the lead author if they would like to be involved in future outlines.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 5
    Publication Date: 2024-01-18
    Description: On 29 June 2022, local observers reported the drainage of a 0.5 ha lake near Qikiqtaġruk (Kotzebue), Alaska, that prompted this collaborative study on the life cycle of a thermokarst lake in the Arctic. Prior to its drainage, the lake expanded from 0.13 ha in 1951 to 0.54 ha in 2021 at lateral rates that ranged from 0.25 to 0.35 m/year. During the drainage event, we estimate that 18,500 m3 of water drained from the lake into Kotzebue Sound, forming a 125-m-long thermo-erosional gully that incised 2 to 14 m in ice-rich permafrost. Between 29 June and 18 August 2022, the drainage gully expanded from 1 m to 〉10 m wide, mobilizing ~8,500 m3 of material through erosion and thaw. By reconstructing a pre-lake disturbance terrain model, we show that thaw subsidence occurs rapidly (0.78 m/year) upon transition from tundra to lake but that over a seventy-year period it slows to 0.12 m/year. The combination of multiple remote sensing tools and local environmental observations provided a rich data set that allowed us to assess rates of lake expansion relative to rates of sub-lake permafrost thaw subsidence as well as hypothesizing about the potential role of beavers in arctic lake drainage.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 6
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    Mushroom Research Foundation
    In:  Mycosphere vol. 14 no. 1, pp. 1960-2012
    Publication Date: 2024-04-03
    Description: The Global Consortium for the Classification of Fungi and fungus-like taxa is an international initiative of more than 550 mycologists to develop an electronic structure for the classification of these organisms. The members of the Consortium originate from 55 countries/regions worldwide, from a wide range of disciplines, and include senior, mid-career and early-career mycologists and plant pathologists. The Consortium will publish a biannual update of the Outline of Fungi and funguslike taxa, to act as an international scheme for other scientists. Notes on all newly published taxa at or above the level of species will be prepared and published online on the Outline of Fungi website (https://www.outlineoffungi.org/), and these will be finally published in the biannual edition of the Outline of Fungi and fungus-like taxa. Comments on recent important taxonomic opinions on controversial topics will be included in the biannual outline. For example, ‘to promote a more stable taxonomy in Fusarium given the divergences over its generic delimitation’, or ‘are there too many genera in the Boletales?’ and even more importantly, ‘what should be done with the tremendously diverse ‘dark fungal taxa?’ There are undeniable differences in mycologists’ perceptions and opinions regarding species classification as well as the establishment of new species. Given the pluralistic nature of fungal taxonomy and its implications for species concepts and the nature of species, this consortium aims to provide a platform to better refine and stabilise fungal classification, taking into consideration views from different parties. In the future, a confidential voting system will be set up to gauge the opinions of all mycologists in the Consortium on important topics. The results of such surveys will be presented to the International Commission on the Taxonomy of Fungi (ICTF) and the Nomenclature Committee for Fungi (NCF) with opinions and percentages of votes for and against. Criticisms based on scientific evidence with regards to nomenclature, classifications, and taxonomic concepts will be welcomed, and any recommendations on specific taxonomic issues will also be encouraged; however, we will encourage professionally and ethically responsible criticisms 1974 of others’ work. This biannual ongoing project will provide an outlet for advances in various topics of fungal classification, nomenclature, and taxonomic concepts and lead to a community-agreed classification scheme for the fungi and fungus-like taxa. Interested parties should contact the lead author if they would like to be involved in future outlines.
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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  • 7
    Publication Date: 2024-03-21
    Description: Protist plankton are major members of open-water marine food webs. Traditionally divided between phototrophic phytoplankton and phagotrophic zooplankton, recent research shows many actually combine phototrophy and phagotrophy in the one cell; these protists are the “mixoplankton.” Under the mixoplankton paradigm, “phytoplankton” are incapable of phagotrophy (diatoms being exemplars), while “zooplankton” are incapable of phototrophy. This revision restructures marine food webs, from regional to global levels. Here, we present the first comprehensive database of marine mixoplankton, bringing together extant knowledge of the identity, allometry, physiology, and trophic interactivity of these organisms. This mixoplankton database (MDB) will aid researchers that confront difficulties in characterizing life traits of protist plankton, and it will benefit modelers needing to better appreciate ecology of these organisms with their complex functional and allometric predator–prey interactions. The MDB also identifies knowledge gaps, including the need to better understand, for different mixoplankton functional types, sources of nutrition (use of nitrate, prey types, and nutritional states), and to obtain vital rates (e.g. growth, photosynthesis, ingestion, factors affecting photo’ vs. phago’ -trophy). It is now possible to revisit and re-classify protistan “phytoplankton” and “zooplankton” in extant databases of plankton life forms so as to clarify their roles in marine ecosystems.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 8
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    FAO
    In:  EPIC3FAO, ISBN: 9789251377147
    Publication Date: 2024-04-25
    Description: Harmful algal blooms (HABs) have significant impacts on food safety and security through contamination or mass mortalities of aquatic organisms. Indeed, if not properly controlled, aquatic products contaminated with HAB biotoxins are responsible for potentially deadly foodborne diseases and when rapidly growing, HAB consequences include reduced dissolved oxygen in the ocean, dead zones, and mass mortalities of aquatic organisms. Improving HAB forecasting is an opportunity to develop early warning systems for HAB events such as food contamination, mass mortalities, or foodborne diseases. Surveillance systems have been developed to monitor HABs in many countries; however, the lead-time or the type of data (i.e. identification at the Species-level, determination of toxicity) may not be sufficient to take effective action for food safety management measures or other reasons, such as transfer of aquaculture products to other areas. Having early warning systems could help mitigate the impact of HABs and reduce the occurrence of HAB events. In this regard, FAO took the lead in the development of a Joint FAO-IOC-IAEA Technical Guidance for the Implementation of Early Warning Systems for HABs. The document will guide competent authorities and relevant institutions involved in consumer protection or environmental monitoring to implement early warning systems for HABs present in their areas (marine and brackish waters), specifically for those affecting food safety or food security (benthic HABs, fish-killing HABs, pelagic toxic HABs, and cyanobacteria HABs).
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev
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  • 9
    Publication Date: 2023-11-23
    Description: Global change puts coastal systems under pressure, affecting the ecology and physiology of marine organisms. In particular, fish larvae are sensitive to environmental conditions, and their fitness is an important determinant of fish stock recruitment and fluctuations. To assess the combined effects of warming, acidification and change in food quality, herring larvae were reared in a control scenario (11°C∗pH 8.0) and a scenario predicted for 2100 (14°C∗pH 7.6) crossed with two feeding treatments (enriched in phosphorus and docosahexaenoic acid or not). The experiment lasted from hatching to the beginning of the post-flexion stage (i.e. all fins present) corresponding to 47 days post-hatch (dph) at 14°C and 60 dph at 11°C. Length and stage development were monitored throughout the experiment and the expression of genes involved in growth, metabolic pathways and stress responses were analysed for stage 3 larvae (flexion of the notochord). Although the growth rate was unaffected by acidification and temperature changes, the development was accelerated in the 2100 scenario, where larvae reached the last developmental stage at a smaller size (-8%). We observed no mortality related to treatments and no effect of food quality on the development of herring larvae. However, gene expression analyses revealed that heat shock transcripts expression was higher in the warmer and more acidic treatment. Our findings suggest that the predicted warming and acidification environment are stressful for herring larvae, inducing a decrease in size-at-stage at a precise period of ontogeny. This could either negatively affect survival and recruitment via the extension of the predation window or positively increase the survival by reducing the larval stage duration.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 10
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    Wageningen University and Research
    In:  EPIC3Socio-Environmental Systems Modelling, Wageningen University and Research, 5, pp. 1-30, ISSN: 2663-3027
    Publication Date: 2024-01-29
    Description: 〈jats:p〉Ocean biogeochemical (BGC) models are a powerful tool for investigating ocean biogeochemistry and the global carbon cycle. The potential benefits emanating from BGC simulations and predictions are broad, with significant societal impacts from fisheries management to carbon dioxide removal and policy-making. These models contain numerous parameters, each coupled with large uncertainties, leading to significant uncertainty in the model outputs. This study performs a global sensitivity analysis (GSA) of an ocean BGC model to identify the uncertain parameters that impact the variability of model outputs most. The BGC model Regulated Ecosystem Model 2 is used in a one-dimensional configuration at two ocean sites in the North Atlantic (BATS) and the Mediterranean Sea (DYFAMED). Variance-based Sobol' indices are computed to identify the most influential parameters for each site for the quantities of interest (QoIs) commonly considered for the calibration and validation of BGC models. The most sensitive parameters are the chlorophyll to nitrogen ratio, chlorophyll degradation rate, zooplankton grazing and excretion parameters, photosynthesis parameters, and nitrogen and carbon remineralization rate. Overall, the sensitivities of most QoIs were similar across the two sites; however, some differences emerged because of different mixed layer depths. The results suggest that implementing multiple zooplankton function types in BGC models can improve BGC predictions. Further, explicitly implementing heterotrophic bacteria in the model can better simulate the carbon export production and CO2 fluxes. The study offers a comprehensive list of the most important BGC parameters that need to be quantified for future modeling applications and insights for BGC model developments.  〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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