Description: The field of ecoinformatics provides concepts, methods and standards to guide management and analysis of ecological data with particular emphasis on exploration of co-occurrences of organisms and their linkage to environmental conditions and taxon attributes. In this editorial, introducing the Special Feature ‘Ecoinformatics and global change’, we reflect on the development of ecoinformatics and explore its importance for future global change research with special focus on vegetation-plot data. We show how papers in this Special Feature illustrate important directions and approaches in this emerging field. We suggest that ecoinformatics has the potential to make profound contributions to pure and applied sciences, and that the analyses, databases, meta-databases, data exchange formats and analytical tools presented in this Special Feature advance this approach to vegetation science and illustrate and address important open questions. We conclude by describing important future directions for the development of the field including incentives for data sharing, creation of tools for more robust statistical analysis, utilities for integration of data that conform to divergent taxonomic standards, and databases that provide detailed plot-specific data so as to allow users to find and access data appropriate to their research needs.

Description: Questions: What are the most likely environmental drivers for compositional herb layer changes as indicated by trait differences between winner and loser species? Location: Weser-Elbe region (NW Germany). Methods: We resurveyed the herb layer communities of ancient forest patches on base-rich sites of 175 semi-permanent plots. Species traits were tested for their ability to discriminate between winner and loser species using logistic regression analyses and deviance partitioning. Results: Of 115 species tested, 31 were identified as winner species and 30 as loser species. Winner species had higher seed longevity, flowered later in the season and more often had an oceanic distribution compared to loser species. Loser species tended to have a higher specific leaf area, were more susceptible to deer browsing and had a performance optimum at higher soil pH compared to winner species. The loser species also represented several ancient forest and threatened species. Deviance partitioning indicated that local drivers (i.e. disturbance due to forest management) were primarily responsible for the species shifts, while regional drivers (i.e. browsing pressure and acidification from atmospheric deposition) and global drivers (i.e. climate warming) had moderate effects. There was no evidence that canopy closure, drainage or eutrophication contributed to herb layer changes. Conclusions: The relative importance of the different drivers as indicated by the winner and loser species differs from that found in previous long-term studies. Relating species traits to species performance is a valuable tool that provides insight into the environmental drivers that are most likely responsible for herb layer changes.

Description:    Soil carbon stocks and sequestration have been given a lot of attention recently in the study of terrestrial ecosystems and global climate change. This review focuses on the progress made on the estimation of the soil carbon stocks of China, and the characterization of carbon dynamics of croplands with regard to climate change, and addresses issues on the mineralization of soil organic carbon in relation to greenhouse gas emissions. By integrating existing research data, China’s total soil organic carbon (SOC) stock is estimated to be 90 Pg and its inorganic carbon (SIC) stock as 60 Pg, with SOC sequestration rates in the range of 20–25 Tg/a for the last two decades. An estimation of the biophysical potential of SOC sequestration has been generally agreed as being 2 Pg over the long term, of which only 1/3 could be attainable using contemporary agricultural technologies in all of China’s croplands. Thus, it is critical to enhance SOC sequestration and mitigate climate change to improve agricultural and land use management in China. There have been many instances where SOC accumulation may not induce an increased amount of decomposition under a warming scenario but instead favor improved cropland productivity and ecosystem functioning. Furthermore, unchanged or even decreased net global warming potential (GWP) from croplands with enhanced SOC has been reported by a number of case studies using life cycle analysis. Future studies on soil carbon stocks and the sequestration potential of China are expected to focus on: (1) Carbon stocks and the sequestration capacity of the earths’ surface systems at scales ranging from the plot to the watershed and (2) multiple interface processes and the synergies between carbon sequestration and ecosystem productivity and ecosystem functioning at scales from the molecular level to agro-ecosystems. Soil carbon science in China faces new challenges and opportunities to undertake integrated research applicable to many areas. Content Type Journal Article Category Review Pages 1-11 DOI 10.1007/s11434-011-4693-7 Authors JuFeng Zheng, Institute for Resource, Ecosystem and Environment of Agriculture, and Research Center of Agriculture and Climate Change, Nanjing Agricultural University, Nanjing, 210095 China Kun Cheng, Institute for Resource, Ecosystem and Environment of Agriculture, and Research Center of Agriculture and Climate Change, Nanjing Agricultural University, Nanjing, 210095 China GenXing Pan, Institute for Resource, Ecosystem and Environment of Agriculture, and Research Center of Agriculture and Climate Change, Nanjing Agricultural University, Nanjing, 210095 China Pete Smith, Institute of Biological and Environmental Sciences, School of Biological Sciences, University of Aberdeen, 23 St Machar Drive, Aberdeen, AB24 3UU UK LianQing Li, Institute for Resource, Ecosystem and Environment of Agriculture, and Research Center of Agriculture and Climate Change, Nanjing Agricultural University, Nanjing, 210095 China XuHui Zhang, Institute for Resource, Ecosystem and Environment of Agriculture, and Research Center of Agriculture and Climate Change, Nanjing Agricultural University, Nanjing, 210095 China JinWei Zheng, Institute for Resource, Ecosystem and Environment of Agriculture, and Research Center of Agriculture and Climate Change, Nanjing Agricultural University, Nanjing, 210095 China XiaoJun Han, Institute for Resource, Ecosystem and Environment of Agriculture, and Research Center of Agriculture and Climate Change, Nanjing Agricultural University, Nanjing, 210095 China YanLing Du, Institute for Resource, Ecosystem and Environment of Agriculture, and Research Center of Agriculture and Climate Change, Nanjing Agricultural University, Nanjing, 210095 China Journal Chinese Science Bulletin Online ISSN 1861-9541 Print ISSN 1001-6538

Description:    Since Westman (1977) and Ehrlich (1982) put forward the concepts of “the service of nature” and “ecosystem service functions”, respectively, methods for conducting value accounting for them, and their practical application have become the subjects of intense study. Based on an overview of available research findings, we discuss three scientific hypotheses. First, the terrestrial ecosystem offers both positive and negative service functions. Second, changes in terrestrial ecosystem service functions lie not only in the number of ecosystem types and the coverage area of each type, but also in their quality. Third, the value of terrestrial ecosystem service functions should be assessed both in terms of the value stocked and the value added. We collected land use data from China during the period 1999–2008, and Normalized Difference Vegetation Index data based on remote sensing images from the Global Inventory Modeling and Mapping Studies for the same period. We then calculated and analyzed spatial and temporal changes in China’s terrestrial ecosystem service values over the 10-year period. Considering temporal change, the total value (stocked) of China’s terrestrial ecosystem service functions decreased from 6.82 trillion Yuan RMB in 1999 to 6.57 trillion Yuan RMB in 2008. During that period, the positive value decreased by 240.17 billion Yuan RMB and the negative value increased by 8.85 billion Yuan RMB. The decrease in total value lies mainly in the humidity control, soil formation, and waste recycling functions. The total value (added) of China’s terrestrial ecosystem service functions increased by 4.31 billion Yuan RMB in 2000, but decreased by 0.13 billion Yuan RMB in 2008 (based on the constant price of China in 1999). The value (added) was a negative figure. From the perspective of spatial change, we can see that the supply of China’s terrestrial ecosystem service functions fell slightly over the past 10 years, mainly in Northeast and Southern China. As a result of human activities on ecosystems, the loss of ecosystem service functions’ value was relatively prominent in Shanxi and Gansu provinces, compared with an increase in value in Shaanxi Province. Terrestrial ecosystem service functions’ value per unit area was relatively high in mid- and East China, showing a prominent spatial change over the 10-year period, but low in Western China. Some conclusions are drawn after an in-depth analysis of the factors causing the spatial and temporal changes in China’s terrestrial ecosystem service functions, in the hope that our suggestions will be helpful for the management of China’s terrestrial ecosystems. Content Type Journal Article Category Article Pages 1-12 DOI 10.1007/s11434-012-4978-5 Authors Yao Shi, State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 China RuSong Wang, State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 China JinLou Huang, State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 China WenRui Yang, Beijing Municipal Institute of City Planning and Design, Beijing, 100045 China Journal Chinese Science Bulletin Online ISSN 1861-9541 Print ISSN 1001-6538

Description: Tropical forests are biologically diverse ecosystems that play important roles in the carbon cycle and maintenance of global biodiversity. Understanding how tropical forests respond to environmental changes is important, as changes in carbon storage can modulate the rate and magnitude of climate change. Applying an ecoinformatics approach for managing long-term forest inventory plot data, where individual trees are tracked over time, facilitates regional and cross-continental forest research to evaluate changes in taxonomic composition, growth, recruitment and mortality rates, and carbon and biomass stocks. We developed ForestPlots.net as a secure, online inventory data repository and to facilitate data management of long-term tropical forest plots to promote scientific collaborations among independent researchers. The key novel features of the database are: (a) a design that efficiently deals with time-series data; (b) data management tools to assess potential errors; and (c) a query library to generate outputs (e.g. biomass and carbon stock changes over time).

Description:    Four wetland maps for all China have been produced, based on Landsat and CBERS-02B remote sensing data between 1978 and 2008 (1978, 1990, 2000 and 2008). These maps were mainly developed by manual interpretation and validated by substantial field investigation in 2009. Based on these maps, we analyzed the 2008 wetland distribution in China and discussed wetland changes and their drivers over the past 30 years. (i) There were about 324097 km 2 of wetlands in 2008, for which inland marshes or swamps were the most common wetland type (35%), with lakes (26%) second. Most of the wetlands were in Heilongjiang, Inner Mongolia, Qinghai and Tibet, occupying about 55% of the national wetland area. (ii) From 1978 to 2008, China’s wetland area continually and significantly decreased, by about 33% based on changes in the wetland map. This was in sharp contrast to the increase in artificial wetlands, which increased by about 122%. Inland marshes accounted for the main loss of total wetlands from 1978 to 2000. From 2000 through 2008, riverine and lacustrine wetlands constituted the main wetland loss. Fortunately however, the rate of wetland loss decreased from 5523 to 831 km 2 /a. (iii) The change ratio of lost natural wetlands (including inland and coastal wetlands) to non-wetlands has decreased slightly over the past 30 years. From 1978 to 1990, nearly all natural wetlands (98%) lost were transformed into non-wetlands. However, the ratio declined to 86% from 1990 to 2000, and to 77% from 2000 to 2008. (iv) All Chinese provinces were divided into three groups according to patterns of wetland changes, which could relate to the driving forces of such changes. Tibet was completely different from other provinces, as it was one representative example in which there was a net wetland increase, because of global warming and decreased human activity since 1990. Increased economic development caused considerable wetland loss in most eastern provinces, and artificial wetlands increased. Content Type Journal Article Category Article Pages 1-11 DOI 10.1007/s11434-012-5093-3 Authors ZhenGuo Niu, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China HaiYing Zhang, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China XianWei Wang, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China WenBo Yao, Ministry of Education Key Laboratory for Earth System Modeling, Center for Earth System Science, Institute for Global Change Studies, Tsinghua University, Beijing, 100084 China DeMin Zhou, Resource Environment and Tourism, Capital Normal University, Beijing, 100037 China KuiYi Zhao, Northeast Institute of Geography and Agricultural Ecology, Chinese Academy of Sciences, Changchun, 130012 China Hui Zhao, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China NaNa Li, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China HuaBing Huang, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China CongCong Li, Department of Geography and Remote Sensing, Beijing Normal University, Beijing, 100875 China Jun Yang, College of Forestry, Beijing Forestry University, Beijing, 100083 China CaiXia Liu, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China Shuang Liu, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China Lin Wang, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China Zhan Li, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China ZhenZhong Yang, Department of Geography and Remote Sensing, Beijing Normal University, Beijing, 100875 China Fei Qiao, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China YaoMin Zheng, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China YanLei Chen, Department of Environmental Science, Policy and Management, University of California, Berkeley, 94720 USA YongWei Sheng, Department of Geography, University of California, Los Angeles, 90095 USA XiaoHong Gao, Department of Life and Geographic Sciences, Qinghai Normal University, Xining, 810008 China WeiHong Zhu, Department of Geography, Yanbian University, Yanbian, 133002 China WenQing Wang, School of Environment and Ecology, Xiamen University, Xiamen, 361005 China Hong Wang, School of Geographical Information Science, Hohai University, Nanjing, 211100 China YongLing Weng, School of Surveying and Mapping Transportation Engineering, Southeast University, Nanjing, 210096 China DaFang Zhuang, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101 China JiYuan Liu, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101 China ZhiCai Luo, School of Surveying and Mapping, Wuhan University, Wuhan, 430079 China Xiao Cheng, Department of Geography and Remote Sensing, Beijing Normal University, Beijing, 100875 China ZiQi Guo, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China Peng Gong, State Key Laboratory of Remote Sensing Science, Jointly Sponsored by Institute of Remote Sensing Applications, Chinese Academy of Sciences and Beijing Normal University, Beijing, 100101 China Journal Chinese Science Bulletin Online ISSN 1861-9541 Print ISSN 1001-6538

Description: Questions The study of naturally discontinuous forest systems could help further our understanding of the relative roles of abiotic factors and spatial connectivity in influencing species turnover and plant metacommunity structure compared to continuous forest formations where local communities are often arbitrarily defined and where ‘mass effects’ and source-sink dynamics tend to confound the roles of dispersal and environment. Here we study a tropical montane landscape where old-growth evergreen forest occurs as patchy formations in a matrix of natural grasslands, to test the influence of environment and connectivity on species turnover and woody plant metacommunity structure . Location The study area consists of the western and southern regions of the Upper Nilgiri Plateau in the Western Ghats of Southern India, a global biodiversity hotspot . Methods We sampled 85 vegetation plots located across a 600 km2 landscape, assembled environmental data, constructed contrasting spatial connectivity models, including models for the effects of topography on structural connectivity, and used RDA-based variation partitioning to assess the relative influence of environment and space on woody plant metacommunity structure . Results Considering several environmental and multi-scale spatial predictors, we could explain half the variation in plant community structure. Environmental and habitat factors such as precipitation, temperature seasonality, elevation, fragment size and landscape context play a dominant role and explain 42% of variation. Spatial predictors based on Euclidean distance performed better than those that accounted for topographical resistance. Spatial predictors accounted for only 9% of the variation in plant metacommunity structure . Conclusion Our results support the species sorting paradigm of metacommunity structure, as abiotic effects and biotic interactions play dominant roles in influencing community structure and species turnover in these old growth forests with a comparatively small influence of spatial connectivity. Effective management of woody species diversity would therefore require conservation of these forests across the range of environmental conditions under which they occur . This article is protected by copyright. All rights reserved.

Description: Questions As biodiversity losses increase due to global change and human-induced habitat destruction, the relationships between plant traits and ecosystem properties can provide a new level of understanding ecosystem complexity. Using a functional response–effect approach, we show that multiple components of the carbon cycle are determined by a few plant traits, which in turn are strongly affected by environmental conditions. Location Salt marshes, northwest Germany. Methods We explored responses of morphological, chemical and biomass-related plant traits to environmental drivers and examined their effects on carbon cycle properties, i.e. above-ground biomass, above-ground net primary productivity and decomposition. The combined analysis between environmental parameters, functional traits and ecosystem properties used structural equation modelling (SEM). Results Important response and effect traits were leaf dry matter content (LDMC) and below-ground dry mass (BDM, responding to groundwater level and salinity) and leaf C:N ratio (responding to inundation frequency). Inundation and salinity led to increased allocation to below-ground biomass and salt stress adaptation in leaves, which translated into increased decomposition rates. Release from these abiotic controls resulted in standing biomass accumulation, which was controlled by LDMC and canopy height as key traits. Conclusions These findings demonstrate the interacting effects of non-consumable environmental factors and soil resources on morphological, chemical and biomass traits, which affected carbon cycle properties. Loss of species from the community has the potential to change the relationships between environment and vegetation-based ecosystem properties and therefore elicit effects on the multifunctionality of the entire and adjacent ecosystems. Studying relationships between plant traits and ecosystem properties can provide new insight into ecosystem complexity. We ask how plant species traits respond to environmental conditions and how key effect traits determine carbon related ecosystem properties in salt marshes of NW-Germany. Our study reveals interacting effects of environmental factors on morphological, chemical and biomass traits and gives recommendations for conservation management.