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  • OceanRep  (14)
  • OceanRep: Article in a Scientific Journal - peer-reviewed  (14)
  • Elsevier  (10)
  • Public Library of Science  (4)
  • 2010-2014  (14)
  • 1
    Publication Date: 2019-09-23
    Description: Biological and environmental changes are creating a growing demand for historical and global data sets. Comparing up-to-date ecological and biological findings with historical statements has become a major part of scientific work in the field of ecology. This evaluation and comparison procedure is very time-consuming while the availability of raw data is very low. Comparisons between original findings – if available – require a lot of work from print publication to digitalization or transformation to appropriate data formats. The effective use of working capacity is a general issue and has become important, should the use of information technologies be invoked to minimize time-wasting copy and paste operations. In this paper we aim to present a working repository for terrestrial biological data. The implementation of this type of data repository will provide various services to participating scientists as long as the final aim is the publication of these repositories. Furthermore, the security and long-term availability of environmental data is an issue of increasing importance to the scientific community. Unrepeatable sampling events and any data thus obtained are precious in time series analysis. For this reason, a well-structured storage of data is necessary for easy accessibility, retrieval and comparability. This is an important issue for the community of environmental scientists. The need to construct and implement repositories should prevail against all hitches and we are therefore describing our on-going task with the primary population of this kind of data repository. A biological and ecological information system is a matter of public interest and should also be a key issue for ecologists.
    Type: Article , PeerReviewed
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  • 2
    Publication Date: 2017-06-22
    Description: Bacteria of the genus Vibrio occur at a continuum from free-living to symbiotic life forms, including opportunists and pathogens, that can contribute to severe diseases, for instance summer mortality events of Pacific oysters Crassostrea gigas. While most studies focused on Vibrio isolated from moribund oysters during mortality outbreaks, investigations of the Vibrio community in healthy oysters are rare. Therefore, we characterized the persistence, diversity, seasonal dynamics, and pathogenicity of the Vibrio community isolated from healthy Pacific oysters. In a reciprocal transplant experiment we repeatedly sampled hemolymph from adult Pacific oysters to differentiate population from site-specific effects during six months of in situ incubation in the field. We characterized virulence phenotypes and genomic diversity based on multilocus sequence typing in a total of 70 Vibrio strains. Based on controlled infection experiments we could show that strains with the ability to colonize healthy adult oysters can also have the potential to induce high mortality rates on larvae. Diversity and abundance of Vibrio varied significantly over time with highest values during and after spawning season. Vibrio communities from transplanted and stationary oysters converged over time, indicating that communities were not population specific, but rather assemble from the surrounding environment forming communities, some of which can persist over longer periods
    Type: Article , PeerReviewed
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  • 3
    Publication Date: 2019-09-23
    Description: The North Sea Benthos Project 2000 was initiated as a follow-up to the 1986 ICES North Sea Benthos Survey with the major aim to identify changes in the macrofauna species distribution and community structure in the North Sea and their likely causes. The results showed that the large-scale spatial distribution of macrofauna communities in the North Sea hardly changed between 1986 and 2000, with the main divisions at the 50 m and 100 m depth contours. Water temperature and salinity as well as wave exposure, tidal stress and primary production were influential environmental factors on a large (North Sea-wide) spatial scale. The increase in abundance and regional changes in distribution of various species with a southern distribution in the North Sea in 2000 were largely associated with an increase in sea surface temperature, primary production and, thus, food supply. This can be most likely related to the North Sea hydro-climate change in the late 1980s influenced by the variability in the North Atlantic Oscillation (NAO). Only one cold-temperate species decreased in abundance in 2000 at most of the stations. Indications for newly established populations of offshore non-native species were not found.
    Type: Article , PeerReviewed
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  • 4
    Publication Date: 2019-09-23
    Description: The ocean regulates the global climate, provides humans with natural resources such as food, materials, important substances, and energy, and is essential for international trade and recreational and cultural activities. Together with human development and economic growth, free access to, and availability of, ocean resources and services have exerted strong pressure on marine systems, ranging from overfishing, increasing resource extraction, and alteration of coastal zones to various types of thoughtless pollution. Both economic theory and many case studies suggest that there is no “tragedy of the commons” but a “tragedy of open access”. With high likeliness, structures of open access are non-sustainable. International cooperation and effective governance are required to protect the marine environment and promote the sustainable use of marine resources in such a way that due account can be taken of the environmental values of current generations and the needs of future generations. For this purpose, developing and agreeing on one Sustainable Development Goal (SDG) specifically for the Ocean and Coasts could prove to be an essential element. The new SDGs will build upon the Millennium Development Goals (MDGs) and replace them by 2015. Ensuring environmental sustainability in a general sense is one of the eight MDGs but the ocean is not explicitly addressed. Furthermore, the creation of a comprehensive underlying set of ocean sustainability targets and effective indicators developed within a global Future Ocean Spatial Planning (FOSP) process would help in assessing the current status of marine systems, diagnosing ongoing trends, and providing information for inclusive, forward-looking, and sustainable ocean governance
    Type: Article , PeerReviewed
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  • 5
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    Elsevier
    In:  Ecological Modelling, 222 (5). pp. 1139-1162.
    Publication Date: 2017-02-21
    Description: In this paper we investigate the seasonal autochthonous sources of dissolved organic carbon (DOC) and nitrogen (DON) in the euphotic zone at a station in the upper Chesapeake Bay using a new mass-based ecosystem model. Important features of the model are: (1) carbon and nitrogen are incorporated by means of a set of fixed and varying C:N ratios; (2) dissolved organic matter (DOM) is separated into labile, semi-labile, and refractory pools for both C and N; (3) the production and consumption of DOM is treated in detail; and (4) seasonal observations of light, temperature, nutrients, and surface layer circulation are used to physically force the model. The model reasonably reproduces the mean observed seasonal concentrations of nutrients, DOM, plankton biomass, and chlorophyll a. The results suggest that estuarine DOM production is intricately tied to the biomass concentration, ratio, and productivity of phytoplankton, zooplankton, viruses, and bacteria. During peak spring productivity phytoplankton exudation and zooplankton sloppy feeding are the most important autochthonous sources of DOM. In the summer when productivity peaks again, autochthonous sources of DOM are more diverse and, in addition to phytoplankton exudation, important ones include viral lysis and the decay of detritus. The potential importance of viral decay as a source of bioavailable DOM from within the bulk DOM pool is also discussed. The results also highlight the importance of some poorly constrained processes and parameters. Some potential improvements and remedies are suggested. Sensitivity studies on selected parameters are also reported and discussed.
    Type: Article , PeerReviewed
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  • 6
    Publication Date: 2017-06-22
    Description: Diatoms can occur as single cells or as chain-forming aggregates. These two strategies affect buoyancy, predator evasion, light absorption and nutrient uptake. Adjacent cells in chains establish connections through various processes that determine strength and flexibility of the bonds, and at distinct cellular locations defining colony structure. Chain length has been found to vary with temperature and nutrient availability as well as being positively correlated with growth rate. However, the potential effect of enhanced carbon dioxide (CO2) concentrations and consequent changes in seawater carbonate chemistry on chain formation is virtually unknown. Here we report on experiments with semi-continuous cultures of the freshly isolated diatom Asterionellopsis glacialis grown under increasing CO2 levels ranging from 320 to 3400 mu atm. We show that the number of cells comprising a chain, and therefore chain length, increases with rising CO2 concentrations. We also demonstrate that while cell division rate changes with CO2 concentrations, carbon, nitrogen and phosphorus cellular quotas vary proportionally, evident by unchanged organic matter ratios. Finally, beyond the optimum CO2 concentration for growth, carbon allocation changes from cellular storage to increased exudation of dissolved organic carbon. The observed structural adjustment in colony size could enable growth at high CO2 levels, since longer, spiral-shaped chains are likely to create microclimates with higher pH during the light period. Moreover increased chain length of Asterionellopsis glacialis may influence buoyancy and, consequently, affect competitive fitness as well as sinking rates. This would potentially impact the delicate balance between the microbial loop and export of organic matter, with consequences for atmospheric carbon dioxide.
    Type: Article , PeerReviewed
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  • 7
    Publication Date: 2013-12-17
    Description: This paper argues that a focus on values, trust and context is vital to build a fuller understanding of public perceptions of carbon dioxide capture and storage (CCS). Empirical data from interviews conducted in the UK and Italy as part of the EU FP7-funded ECO2 project is presented to illustrate how publics and stakeholders often evaluate the geological storage of carbon dioxide in terms of its relation to their broader world views, rather than purely in terms of the perceived techno-scientific risks of the technology.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 8
    Publication Date: 2017-06-22
    Description: Climate forcing in complex ecosystems can have profound implications for ecosystem sustainability and may thus challenge a precautionary ecosystem management. Climatic influences documented to affect various ecological functions on a global scale, may themselves be observed on quantitative or qualitative scales including regime shifts in complex marine ecosystems. This study investigates the potential climatic impact on the reproduction success of spring-spawning herring (Clupea harengus) in the Western Baltic Sea (WBSS herring). To test for climate effects on reproduction success, the regionally determined and scientifically well-documented spawning grounds of WBSS herring represent an ideal model system. Climate effects on herring reproduction were investigated using two global indices of atmospheric variability and sea surface temperature, represented by the North Atlantic Oscillation (NAO) and the Atlantic Multi-decadal Oscillation (AMO), respectively, and the Baltic Sea Index (BSI) which is a regional-scale atmospheric index for the Baltic Sea. Moreover, we combined a traditional approach with modern time series analysis based on a recruitment model connecting parental population components with reproduction success. Generalized transfer functions (ARIMAX models) allowed evaluating the dynamic nature of exogenous climate processes interacting with the endogenous recruitment process. Using different model selection criteria our results reveal that in contrast to NAO and AMO, the BSI shows a significant positive but delayed signal on the annual dynamics of herring recruitment. The westward influence of the Siberian high is considered strongly suppressing the influence of the NAO in this area leading to a higher explanatory power of the BSI reflecting the atmospheric pressure regime on a North-South transect between Oslo, Norway and Szczecin, Poland. We suggest incorporating climate-induced effects into stock and risk assessments and management strategies as part of the EU ecosystem approach to support sustainable herring fisheries in the Western Baltic Sea.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 9
    Publication Date: 2019-09-23
    Description: Chemical (Sr, Mg) and isotopic (δ18O, 87Sr/86Sr) compositions of calcium carbonate veins (CCV) in the oceanic basement were determined to reconstruct changes in Sr/Ca and Mg/Ca of seawater in the Cenozoic. We examined CCV from 10 basement drill sites in the Atlantic and Pacific, ranging in age between 165 and 2.3 Ma. Six of these sites are from cold ridge flanks in basement 〈46 Ma, which provide direct information about seawater composition. CCV of these young sites were dated, using the Sr isotopic evolution of seawater. For the other sites, temperature-corrections were applied to correct for seawater–basement exchange processes. The combined data show that a period of constant/low Sr/Ca (4.46–6.22 mmol/mol) and Mg/Ca (1.12–2.03 mol/mol) between 165 and 30 Ma was followed by a steady increase in Mg/Ca ratios by a factor of three to modern ocean composition. Mg/Ca–Sr/Ca relations suggest that variations in hydrothermal fluxes and riverine input are likely causes driving the seawater compositional changes. However, additional forcing may be involved in explaining the timing and magnitude of changes. A plausible scenario is intensified carbonate production due to increased alkalinity input to the oceans from silicate weathering, which in turn is a result of subduction-zone recycling of CO2 from pelagic carbonate formed after the Cretaceous slow-down in ocean crust production rate.
    Type: Article , PeerReviewed
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  • 10
    Publication Date: 2019-09-23
    Description: We review progress in Baltic Sea physical oceanography (including sea ice and atmosphere–land interactions) and Baltic Sea modelling, focusing on research related to BALTEX Phase II and other relevant work during the 2003–2014 period. The major advances achieved in this period are: • Meteorological databases are now available to the research community, partly as station data, with a growing number of freely available gridded datasets on decadal and centennial time scales. The free availability of meteorological datasets supports the development of more accurate forcing functions for Baltic Sea models. • In the last decade, oceanographic data have become much more accessible and new important measurement platforms, such as FerryBoxes and satellites, have provided better temporally and spatially resolved observations. • Our understanding of how large-scale atmospheric circulation affects the Baltic Sea climate, particularly in winter, has improved. Internal variability is strong illustrating the dominant stochastic behaviour of the atmosphere. • The heat and water cycles of the Baltic Sea are better understood. • The importance of surface waves in air–sea interaction is better understood, and Stokes drift and Langmuir circulation have been identified as likely playing an important role in surface water mixing in sea water. • We better understand sea ice dynamics and thermodynamics in the coastal zone where sea ice interaction between land and sea is crucial. • The Baltic Sea’s various straits and sills are of increasing interest in seeking to understand water exchange and mixing. • There has been increased research into the Baltic Sea coastal zone, particularly into upwelling, in the past decade. • Modelling of the Baltic Sea–North Sea system, including the development of coupled land–sea–atmosphere models, has improved. Despite marked progress in Baltic Sea research over the last decade, several gaps remain in our knowledge and understanding. The current understanding of salinity changes is limited, and future projections of salinity evolution are uncertain. In addition, modelling of the hydrological cycle in atmospheric climate models is severely biased. More detailed investigations of regional precipitation and evaporation patterns (including runoff), atmospheric variability, highly saline water inflows, exchange between sub-basins, circulation, and especially turbulent mixing are still needed. Furthermore, more highly resolved oceanographic models are necessary. In addition, models that incorporate more advanced carbon cycle and ecosystem descriptions and improved description of water–sediment interactions are needed. There is also a need for new climate projections and simulations with improved atmospheric and oceanographic coupled model systems. These and other research challenges are addressed by the recently formed Baltic Earth research programme, the successor of the BALTEX programme, which ended in 2013. Baltic Earth will treat anthropogenic changes and impacts together with their natural drivers. Baltic Earth will serve as a network for earth system sciences in the region, following in the BALTEX tradition but in a wider context.
    Type: Article , PeerReviewed
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