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  • Journals
  • Articles  (37)
  • Open Access-Papers  (37)
  • MDPI  (16)
  • Springer Nature  (13)
  • Russian Federal Research Institute of Fisheries and Oceanography (VNIRO)
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  • Articles  (37)
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  • Open Access-Papers  (37)
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  • 1
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    A baseline study of spatial variability of bacteria (total coliform, E. coli, and Enterococcus spp.) as biomarkers of pollution in ten tropical Atlantic beaches: concern for environmental and public health (2021)
    Springer Nature
    In:  EPIC3Environmental Science and Pollution Research, Springer Nature, 28(36), pp. 50941-50965, ISSN: 0944-1344
    Details
    Publication Date: 2023-03-07
    Description: Coastal water quality in urban cities is increasingly impacted by human activities such as agricultural runoff, sewage discharges, and poor sanitation. However, environmental factors controlling bacteria abundance remain poorly understood. The study employed multiple indicators to assess ten beach water qualities in Ghana during minor wet seasons. Environmental parameters (e.g. temperature, electrical conductivity, total dissolved solids) were measured in situ using the Horiba multiple parameter probe. Surface water samples were collected to measure total suspended solids, nutrients, and chlorophyll-a via standard methods and bacteria determination through membrane filtration. Environmental parameters measured showed no significant variation for the sample period. However, bacteria loads differ significantly (p = 0.024) among the beaches and influenced significantly by nitrate (55.3%, p = 0.02) and total dissolved solids (17.1%, p = 0.017). The baseline study detected an increased amount of total coliforms and faecal indicator bacteria (Escherichia coli and Enterococcus spp.) in beach waters along the coast of Ghana, suggesting faecal contamination, which can pose health risks. The mean ± standard deviations of bacteria loads in beach water are total coliforms (4.06 × 103 ± 4.16 × 103 CFU/100 mL), E. coli (7.06 × 102 ± 1.72 × 103 CFU/100 mL), and Enterococcus spp. (6.15 × 102 ± 1.75 × 103 CFU/100 mL). Evidence of pollution calls for public awareness to prevent ecological and health-related risks and policy reforms to control coastal water pollution. Future research should focus on identifying the sources of contamination in the tropical Atlantic region.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 2
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    GLORIA - A globally representative hyperspectral in situ dataset for optical sensing of water quality (2023)
    Springer Nature
    In:  EPIC3Scientific Data, Springer Nature, 10(1), pp. 100-100, ISSN: 2052-4463
    Details
    Publication Date: 2024-04-10
    Description: The development of algorithms for remote sensing of water quality (RSWQ) requires a large amount of in situ data to account for the bio-geo-optical diversity of inland and coastal waters. The GLObal Reflectance community dataset for Imaging and optical sensing of Aquatic environments (GLORIA) includes 7,572 curated hyperspectral remote sensing reflectance measurements at 1 nm intervals within the 350 to 900 nm wavelength range. In addition, at least one co-located water quality measurement of chlorophyll a, total suspended solids, absorption by dissolved substances, and Secchi depth, is provided. The data were contributed by researchers affiliated with 59 institutions worldwide and come from 450 different water bodies, making GLORIA the de-facto state of knowledge of in situ coastal and inland aquatic optical diversity. Each measurement is documented with comprehensive methodological details, allowing users to evaluate fitness-for-purpose, and providing a reference for practitioners planning similar measurements. We provide open and free access to this dataset with the goal of enabling scientific and technological advancement towards operational regional and global RSWQ monitoring.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 3
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    Mining questions of ‘what’ and ‘who’: deepening discussions of the seabed for future policy and governance (2022)
    Springer Nature
    In:  EPIC3Maritime Studies, Springer Nature, 21(3), pp. 327-338, ISSN: 1872-7859
    Details
    Publication Date: 2023-10-30
    Description: 〈jats:title〉Abstract〈/jats:title〉〈jats:p〉In spite of a proliferation of academic and policy-oriented interest in deep sea mining (DSM), this paper argues that two underlying questions remain underexplored. The first relates to 〈jats:italic〉what〈/jats:italic〉 exactly the seabed 〈jats:italic〉is〈/jats:italic〉; the second to 〈jats:italic〉who〈/jats:italic〉 the stakeholders 〈jats:italic〉are〈/jats:italic〉. It is argued that a greater interrogation of how the seabed is defined and understood, and a deeper consideration of how stakeholders are identified and the politics of their inclusion, is crucial to the enactment of policy and planning techniques. Through the analysis of current regulations to govern DSM in both national and international jurisdictions, this paper critically examines these seemingly banal but vital questions in different contexts. It is contended that most regulations are ‘fuzzy’ when it comes to addressing these questions, with the result that different understandings of the seabed and the implications of mining are ignored and that who stakeholders are and how they are defined causes many relevant voices to be unheard. It is argued, therefore, that it is imperative to address these often-overlooked questions directly in order to inform future seabed policy and governance.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 4
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    Availability of vitamin B12 and its lower ligand intermediate α-ribazole impact prokaryotic and protist communities in oceanic systems (2022)
    Springer Nature
    In:  EPIC3The ISME Journal: Multidisciplinary Journal of Microbial Ecology, Springer Nature, 16(8), pp. 2002-2014, ISSN: 1751-7362
    Details
    Publication Date: 2023-11-14
    Description: Genome analyses predict that the cofactor cobalamin (vitamin B12, called B12 herein) is produced by only one-third of all prokaryotes but almost all encode at least one B12-dependent enzyme, in most cases methionine synthase. This implies that the majority of prokaryotes relies on exogenous B12 supply and interacts with producers. B12 consists of a corrin ring centred around a cobalt ion and the lower ligand 5’6-dimethylbenzimidazole (DMB). It has never been tested whether availability of this pivotal cofactor, DMB or its intermediate α-ribazole affect growth and composition of prokaryotic microbial communities. Here we show that in the subtropical, equatorial and polar frontal Pacific Ocean supply of B12 and α-ribazole enhances heterotrophic prokaryotic production and alters the composition of prokaryotic and heterotrophic protist communities. In the polar frontal Pacific, the SAR11 clade and Oceanospirillales increased their relative abundances upon B12 supply. In the subtropical Pacific, Oceanospirillales increased their relative abundance upon B12 supply as well but also downregulated the transcription of the btuB gene, encoding the outer membrane permease for B12. Surprisingly, Prochlorococcus, known to produce pseudo-B12 and not B12, exhibited significant upregulation of genes encoding key proteins of photosystem I + II, carbon fixation and nitrate reduction upon B12 supply in the subtropical Pacific. These findings show that availability of B12 and α-ribazole affect growth and composition of prokaryotic and protist communities in oceanic systems thus revealing far-reaching consequences of methionine biosynthesis and other B12-dependent enzymatic reactions on a community level.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 5
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    Updating approaches to the stock assessment and calculation of recommended catch of brine shrimp and brine shrimp at the cyst stage (species of the genus Artemia) (2022)
    Russian Federal Research Institute of Fisheries and Oceanography (VNIRO) | Moscow (Russia)
    Details
    Publication Date: 2022-12-21
    Description: The proposed recommendations are seen as a logical development of research aimed at assessing the state of the resource base and catch forecasting for brine shrimp and brine shrimp at the stage of cysts for different timing. Their special feature is the use of a unified methodical approach which takes into account the qualitative composition of populations and the background conditions of their habitat.
    Description: Предложенные рекомендации являются логическим развитием исследований, направленных на оценку состояния сырьевой базы и формирование прогнозов вылова артемии и артемии (на стадии цист) различной заблаговременности. Их особенность в использовании единого методического подхода для учёта качественного состава популяций и фоновых условий среды их обитания.
    Description: Published
    Description: Non Refereed
    Keywords: Brine shrimp ; Stock assessment ; Artemia ; Food resources ; Methodology ; Recommended catches ; Рекомендованный вылов ; Цисты ; Артемия ; Оценка запасов ; ASFA_2015::B::Brine shrimp eggs ; ASFA_2015::C::Cysts ; ASFA_2015::F::Forecasting
    Repository Name: AquaDocs
    Type: Conference Material
    Format: 3pp.
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  • 6
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    New Knowledge on Distribution and Abundance of Toxic Microalgal Species and Related Toxins in the Northwestern Black Sea (2022)
    MDPI
    In:  EPIC3Toxins, MDPI, 14(10), pp. 685, ISSN: 2072-6651
    Details
    Publication Date: 2022-10-16
    Description: Numerous potentially toxic plankton species commonly occur in the Black Sea, and phycotoxins have been reported. However, the taxonomy, phycotoxin profiles, and distribution of harmful microalgae in the basin are still understudied. An integrated microscopic (light microscopy) and molecular (18S rRNA gene metabarcoding and qPCR) approach complemented with toxin analysis was applied at 41 stations in the northwestern part of the Black Sea for better taxonomic coverage and toxin profiling in natural populations. The combined dataset included 20 potentially toxic species, some of which (Dinophysis acuminata, Dinophysis acuta, Gonyaulax spinifera, and Karlodinium veneficum) were detected in over 95% of the stations. In parallel, pectenotoxins (PTX-2 as a major toxin) were registered in all samples, and yessotoxins were present at most of the sampling points. PTX-1 and PTX-13, as well as some YTX variants, were recorded for the first time in the basin. A positive correlation was found between the cell abundance of Dinophysis acuta and pectenotoxins, and between Lingulodinium polyedra and Protoceratium reticulatum and yessotoxins. Toxic microalgae and toxin variant abundance and spatial distribution was associated with environmental parameters. Despite the low levels of the identified phycotoxins and their low oral toxicity, chronic toxic exposure could represent an ecosystem and human health hazard.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 7
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    Short and decadal impacts of seafloor physical perturbation on the abundances of Lebensspuren ‘traces of life’ in the Peru Basin manganese nodule province (2024)
    Springer Nature
    In:  EPIC3Marine Biodiversity, Springer Nature, 54(1), pp. 11-11, ISSN: 1867-1616
    Details
    Publication Date: 2024-03-27
    Description: Interest in deep-sea mining for polymetallic nodules as an alternative source to onshore mines for various high-technology metals has risen in recent years, as demands and costs have increased. The need for studies to assess its short- and long-term consequences on polymetallic nodule ecosystems is therefore also increasingly prescient. Recent image-based expedition studies have described the temporal impacts on epi-/megafauna seafloor communities across these ecosystems at particular points in time. However, these studies have failed to capture information on large infauna within the sediments or give information on potential transient and temporally limited users of these areas, such as mobile surface deposit feeders or fauna responding to bloom events or food fall depositions. This study uses data from the Peru Basin polymetallic nodule province, where the seafloor was previously disturbed with a plough harrow in 1989 and with an epibenthic sled (EBS) in 2015, to simulate two contrasting possible impact forms of mining disturbance. To try and address the shortfall on information on transient epifauna and infauna use of these various disturbed and undisturbed areas of nodule-rich seafloor, images collected 6 months after the 2015 disturbance event were inspected and all Lebensspuren, ‘traces of life’, were characterized by type (epi- or infauna tracemakers, as well as forming fauna species where possible), along with whether they occurred on undisturbed seafloor or regions disturbed in 1989 or 2015. The results show that epi- and endobenthic Lebensspuren were at least 50% less abundant across both the ploughed and EBS disturbed seafloors. This indicates that even 26 years after disturbance, sediment use by fauna may remain depressed across these areas.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 8
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    The Climatic Response of Tree Ring Width Components of Ash (Fraxinus excelsior L.) and Common Oak (Quercus robur L.) from Eastern Europe (2020)
    MDPI
    In:  EPIC3Forests, MDPI, 11(5), ISSN: 1999-4907
    Details
    Publication Date: 2020-08-10
    Description: This paper aims to develop the first differentiated (earlywood—EW, latewood—LW, and total ring width—RW) dendrochronological series for ash (Fraxinus excelsior L.) and oak (Quercus robur L.) trees from the Republic of Moldova, and to analyze their climatic response and their spatio-temporal stability. For this, 18 ash and 26 oak trees were cored from the DobruÈ�a protected area, Republic of Moldova, Eastern Europe, and new EW, LW, and RW chronologies were developed for ash and oak covering the last century. The obtained results showed that the RW and LW have a similar climatic response for both species, while EW is capturing interannual climate variations and has a different reaction. The analyses performed with monthly climatic data revealed a significant and negative correlation with the mean air temperature and a significant and positive correlation with precipitation and the Standardized Precipitation-Evapotranspiration Index (SPEI) for both ash and oak. The temperature during the vegetation period has a strong influence on all tree-ring components of ash, while for oak the strong correlation was found only for LW. The positive and significant correlation between LW and RW with precipitation for both species, suggests that ash and oak are sensitive to the hydrological component and the precipitation is the main tree growth-limiting factor. Despite the significant correlation with precipitation and temperature for the whole analyzed period, the 25-year moving correlation analyses show that they are not stable in time and can switch from positive to negative or vice versa, while the correlation with SPEI3 drought index, which is a integration of both climatic parameters, is stable in time. By employing the stability map analysis, we show that oak and ash tree ring components, from the eastern part of the Republic of Moldova, have a stable and significant correlation with SPEI3 and scPDSI drought indices from February (January) until September, over the eastern part of Europe.
    Repository Name: EPIC Alfred Wegener Institut
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  • 9
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    Effects and perception of marine introduced species by stakeholders in the Wadden Sea—an exploratory approach (2023)
    Springer Nature
    In:  EPIC3Marine Biodiversity, Springer Nature, 53(5), pp. 58-58, ISSN: 1867-1616
    Details
    Publication Date: 2024-09-05
    Description: As a result of globalization of markets and increasing marine traffic, more than 130 introduced species have so far been recorded in the Wadden Sea. This unique coastal area constitutes an ecosystem of global importance and is recognized by UNESCO as a Natural World Heritage site. Efforts are made to monitor introduced species and to study their ecological effects on native species and biodiversity, ecosystem processes, and functioning. Social aspects that relate introduced species specifically to people and human society, however, are less studied. To explore this rather new field of research, qualitative interviews were conducted with stakeholders of the Wadden Sea, asking (1) How do introduced species affect people’s lives and (2) How do people perceive introduced species? The interviews were evaluated with a qualitative content analysis. As one first result of this exploratory study it turned out that immaterial aspects of the Wadden Sea, such as recreational potential and cultural identity, appear to be largely affected by introduced species. Moreover, the mere fact of change was mostly regarded with skepticism or aversion, regardless of actual effects. Based on the stakeholder interviews, a conceptual framework with the factors identified as influencing perception was developed. It is suggested that a better understanding of the social component is essential for an integrated management and sustainable solutions.
    Repository Name: EPIC Alfred Wegener Institut
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  • 10
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    Features of distribution and daily vertical migrations of Pacific salmon in the Aleutian waters of the Pacific Ocean in the winter 2022 according to hydro acoustic measurements (2022)
    Russian Federal Research Institute of Fisheries and Oceanography (VNIRO) | Moscow (Russia)
    Details
    Publication Date: 2022-12-21
    Description: The article provides the acoustic assessments of the population and biomass of Pacific salmon in the Aleutian waters of the Pacific Ocean in the winter 2022. Spatial distributions of the main salmon species were obtained, daily vertical migrations were considered.
    Description: В работе представлены акустические оценки численности и биомассы тихоокеанских лососей в приалеутских водах Тихого океана в зимний период 2022 г. Были получены пространственные распределения основных видов лососей, рассмотрены их суточные вертикальные миграции.
    Description: Published
    Description: Non Refereed
    Keywords: Pacific salmon ; Spatial distribution ; Vertical migrations ; Sockeye salmon ; Hydroacoustics ; Echosounders ; Chum salmon ; Тихоокеанские лососи ; Нерка ; Кета ; ASFA_2015::A::Acoustic sensing ; ASFA_2015::S::Salmon fisheries ; ASFA_2015::B::Biomass
    Repository Name: AquaDocs
    Type: Conference Material
    Format: 4pp.
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