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Differentiation of the “Ascochyta complex” fungi of pea by biochemical and molecular markers

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Abstract

Isolates of three closely related pea pathogens,Ascochyta pisi, Ascochyta pinodes (teleomorphMycosphaerella pinodes) andPhoma medicaginis var. pinodella, were compared by means of isozyme analysis and restriction fragment length polymorphisms (RFLP) of amplified rDNA spacers. Three enzyme systems differentiatedA. pisi fromM. pinodes andP. m. pinodella. The internal transcribed spacers (ITSs) of the three fungi showed no intraspecific and very little interspecific variation after digestion with 12 endonucleases. Digestion of the intergenic spacer (IGS) withHinfI, andSau3A revealed uniformity inA. pisi patterns which consistently differed from those ofM. pinodes andP. m. pinodella. No clear distinction could be made between the latter two fungi which both showed intraspecific variability. Both biochemical and molecular markers thus discriminated between twoAscochyta species. The results also indicated a closer relationship between two organisms belonging to different genera (Ascochyta andPhoma) than between two species of the same genus (Ascochyta).

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References

  • Boerema GH, Bollen GJ (1975) Conidiogenesis and conidial septation as differentiating criteria betweenPhoma andAscochyta. Persoonia 8:111–144

    Google Scholar 

  • Bonde MR, Peterson GL, Emmett RW, Menge JA (1991) Isozyme comparison ofSeptoria isolates associated with citrus in Australia and the United States. Phytopathology 81:517–521

    Google Scholar 

  • Chandon JL, Pinson S (1981) In: Masson (ed) Analyses typologiques. Théories et applications

  • Damaj M, Jabaji-Hare SH, Charest P-M (1993) Isozyme variation and genetic relatedness in binucleateRhizoctonia species. Phytopathology 83:864–871

    Google Scholar 

  • Dellaporta SL, Wood J, Hicks JB (1983) A plant DNA mini-preparation: 2nd edn. Plant Mol Biol Rep 1:19–21

    Google Scholar 

  • Erland S, Herion B, Martin F, Glover LA, Alexander IJ (1994) Identification of the ectomycorrhizal basidiomyceteTylospora fibrillosa Donk. by RFLP of the PCR-amplified ITS and IGS regions of ribosomal DNA. New Phytol 126:525–532

    Google Scholar 

  • Gall C, Balesdent M-H, Desthieux I, Robin P, Rouxel T (1995) Polymorphism of Tox°Leptosphaeria maculans isolates as revealed by soluble protein and isozyme electrophoresis. Mycol Res 99:221–229

    Google Scholar 

  • Garber RC, Turgeon BG, Selker EU, Yoder OC (1988) Organization of ribosomal RNA genes in the fungusCochhobolus heterostrophus. Curr Genet 14:573–582

    Article  PubMed  Google Scholar 

  • Hellman R, Christ BJ (1991) Isozyme variation of physiologic races ofUstilago hordei. Phytopathology 81:1536–1540

    Google Scholar 

  • Hwang SF, Lopetinsky K, Evans IR (1991) Effects of seed infection byAscochyta spp., fungicide treatment, and cultivar on yield parameters of field pea under field conditions. Can Plant Dis Survey 71:169–172

    Google Scholar 

  • Jones LK (1927) Studies of the nature and control of blight, leaf and pod spot and foot rot of peas caused by species ofAscochyta. NY State Agric Exp Stn Bull 547:1–45

    Google Scholar 

  • Julian AM, Lucas JA (1990) Isozyme polymorphism in pathotypes ofPseudocercosporella herpotrichoides and related species from cereals. Plant Pathol 39:178–190

    Google Scholar 

  • Kistler HC, Miao VPW (1992) New modes of genetic change in filamentous fungi. Annu Rev Phytopathol 30:131–152

    Article  Google Scholar 

  • Klassen GR, Buchko J (1990) Subrepeat structure of the intergenic region in the ribosomal DNA of the oomycetous fungusPythium ultimum. Curr Genet 17:125–127

    Article  Google Scholar 

  • Lee SB, White TJ, Taylor JW (1993) Detection ofPhytophthora species by oligonucleotide hybridization to amplified ribosomal DNA spacers. Phytopathology 83:177–181

    Google Scholar 

  • Lévesque AC, Vrain TC, DeBoer SH (1994) Production of species-specific probes for differentPythium species using PCR and ribosomal DNA. Phytopathology 84:474–478

    Google Scholar 

  • Louanchi M (1993) Contribution à l'étude deRigidoporus lignosus agent du pourridie blanc des racines d'Hevea brasiliensis: étude de la diversité génétique des populations et détection par les méthodes immunoenzymatiques. PhD thesis. Université Paris XI. Orsay

    Google Scholar 

  • Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York

    Google Scholar 

  • Mathur RS, Barnett HL, Lilly VG (1950) Sporulation ofColletotrichum lindemuthianum in culture. Phytopathology 40:104–114

    Google Scholar 

  • Meijer G, Megnegneau B, Linders EGA (1994) Variability for isozyme, vegetative compatibility and RAPD markers in natural populations ofPhomopsis subordinaria. Mycol Res 98:267–276

    Google Scholar 

  • Montel E, Bridge PD, Sutton BC (1991) An integrated approach toPhoma systematics. Mycopathologia 115:89–103

    Article  PubMed  Google Scholar 

  • Nazar RN, Hu X, Schmidt J, Culham D, Robb J (1991) Potential use of PCR-amplified ribosomal intergenic sequences in the detection and differentiation ofVerticillium wilt pathogens. Physiol Mol Plant Pathol 39:1–11

    Article  Google Scholar 

  • Nooderloos ME, De Gruyter J, Van Eijk GW, Roeijmans HJ (1993) Production of dendritic crystals in pure cultures ofPhoma andAscochyta and its value as a taxonomic character relative to morphology, pathology and cultural characteristics. Mycol Res 97:1343–1350

    Google Scholar 

  • O'Donnell K (1992) Ribosomal DNA internal transcribed spacers are highly divergent in the phytopathogenic ascomyceteFusarium sambucinum (Gibberella pulicaris). Curr Genet 22:213–220

    Article  PubMed  Google Scholar 

  • Petrunak DM, Christ BJ (1992) Isozyme variability inAlternaria solani andA. alternata. Phytopathology 82:1343–1347

    Google Scholar 

  • Poupard P, Simonet P, Cavelier N, Bardin R (1993) Molecular characterization ofPseudocercosporella herpotrichoides isolates by amplification of ribosomal DNA internal spacers. Plant Pathol 42:873–881

    Google Scholar 

  • Sherriff C, Whelan MJ, Arnold GM, Bailey JA (1995) rDNA sequence analysis confirms the distinction betweenColletotrichum graminicola andC. sublineolum. Mycol Res 99:475–478

    Google Scholar 

  • Sneath PHA, Sokal RR (1973) Numerical taxonomy. W.H. Freeman and Co., San Francisco, USA

    Google Scholar 

  • Tisserat NA, Hulbert SH, Sauer KM (1994) Selective amplification of rDNA internal transcribed spacer regions to detectOphiosphaerella korrae andO. herpotricha. Phytopathology 84:478–482

    Google Scholar 

  • Wallen VR (1965) Field evaluation and the importance of theAscochyta complex on peas. Can J Plant Sci 45:27–33

    Google Scholar 

  • White JF, Morgan-Jones G (1987) Studies in the genus Phoma. VI. ConcerningPhoma medicaginis var.pinodella. Mycotaxon 28:241–248

    Google Scholar 

  • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols, a guide to methods and applications. Academic Press, San Diego, CA, USA, pp 315–322

    Google Scholar 

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Communicated by P.J.G.M. de Wit

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Faris-Mokaiesh, S., Boccara, M., Denis, J.B. et al. Differentiation of the “Ascochyta complex” fungi of pea by biochemical and molecular markers. Curr Genet 29, 182–190 (1996). https://doi.org/10.1007/BF02221583

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