Genome-Wide Detection of CNVs and Their Association with Meat Tenderness in Nelore Cattle
Fig 5
Genome wide association of CNV state with shear force estimated breeding value (SF-EBV).
Manhattan plot for 447 CNV segments on somatic chromosomes (x-axis) and the corresponding -log10 p-value (y-axis) indicating the association strength with SF-EBV. Multiple testing correction was performed, controlling the false discovery rate (FDR, [64]). Red and blue lines indicate FDR-corrected p-values of 0.05 and 0.1, respectively. The black arrows indicate CNVRs with p-value <0.1 and list the nearest protein-coding genes up- and downstream of the segment (in a genomic window ≤1Mb). Raw signal strength is shown in S3 Fig.