Peer Review History
Original SubmissionMay 8, 2020 |
---|
PONE-D-20-13626 A systematic review of submitted protocols for randomized clinical trials investigating COVID-19 medical prevention and treatment PLOS ONE Dear Dr. Karlsen, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. A key issue noted by both reviewers is the incorrect reference to trial protocols when the meaning is actually trial registrations. Both reviewers also have additional comments which should be responded to. Please submit your revised manuscript by Aug 23 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Lisa Susan Wieland Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please confirm that you have included all items recommended in the PRISMA checklist including the full electronic boolean search strategy used to identify studies with all search terms and limits for at least one database. Please attach this as supplementary file. 3. In your discussion, please explain how your work builds upon similar previously published research, including (1) https://covid-nma.com/ and (2) https://www.iddo.org/research-themes/covid-19/live-systematic-clinical-trial-review. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: N/A Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Thank you for the opportunity to review this manuscript. The manuscript presents a rigorous study examining which clinical studies had been registered in 32 different registries. The manuscript presents the planned size, planned blinding, and whether mortality was a planned outcome for the identified planned studies. The authors suggest that the results of the study can be used to plan future studies and set research priorities. Unfortunately, considering the rapidly evolving situation I am afraid the findings might already be outdated. Additionally, several regularly updated alternatives exist, e.g. Cochranes “Covid-19 Study Register” (https://covid-19.cochrane.org/?pn=1), EBM Datalabs “Covid-19 TrialsTracker” (http://covid19.trialstracker.net/), and COVID-Evidence (https://covid-evidence.org/database) Thus, I am afraid the reviewed manuscript will not be able to contribute substantially to priority setting or planning of future research activities: I do, however, find the methods to be technically sound and that the data supports the conclusions. My comments to the manuscript are presented below: Major issues: Introduction: • Several resources that track planned and completed trials are available online (including, but not limited to, the ones mentioned above). These should be mentioned in the introduction and it should be clarified how the presented study contributes. • Throughout the manuscript, the authors refer to protocols. A clinical study protocol is a quite elaborate document, that is e.g. submitted to ethical committees or institutional review boards to get ethical approval. Protocols are sometimes, but not always, published, but would not necessarily be available from trial registries, so it is my impression that the authors are in fact referring to trial registry entries. If the authors have in fact obtained protocols for all included trials, they should explain how these were obtained. Otherwise, I suggest changing the wording from protocol to trial registry entry throughout the text. Methods: • It is not explained why blinding is considered of particular importance. I would probably expect blinding to be less important for relatively objective outcomes such as overall mortality (although blinding could be very important for cause-specific mortality). Perhaps the authors could elaborate on the choice of outcome. o Additionally, in the results, the authors use the categories “Open label, single blind, double blind, triple blind, and quadruple blind”. It is not clear what these different categories describe, and research has shown that e.g. “double blind” is an ambiguous term[1,2]. The authors should explain how they operationalise blinding in the methods section. • Regarding mortality as an outcome: Are the authors only looking at overall mortality or also cause-specific? This should be elaborated on. Discussion: • Perspective: as mentioned above, I am afraid that the results of the study may already be outdated and more up-to-date resources exist. Minor issues: Throughout the text the terms blinding, and masking are used interchangeably. If the authors believe these words are not describing the same this should be elaborated on, otherwise the text should be revised so only one term is used. Abstract • In conclusions the authors write: “a second wave of higher level evidence” – it is unclear what the first wave was and thus what “higher” is relative to. This is explained in the introduction but is not mentioned in the abstract. Thus, I suggest rephrasing. Background: • First paragraph: the authors write: “symptoms ranging from mild symptoms of upper airway infection to …” – I believe many reports state that a high proportion of people infected with SARS-CoV-2 are completely asymptomatic. Perhaps the authors could consider mentioning this. • Second paragraph: the authors write: “… to ensure a second wave of high-quality evidence with proper assessment of safety and efficacy measures” – I would suggest avoiding the term “safety” as this term tends to underplay harms and convey the idea that drugs have no, or non-important, side effects. I would suggest using “proper assessment of benefits and harms” – however, I am aware that this is not universally agreed upon, so just a suggestion. Methods: • Data handling: The authors refer to “trial phase” – it is not immediately clear to me what they are referring to here – I assume it is the phases of clinical research, but some trials have multiple phases (e.g. double-blind and open-label), so perhaps the authors could elaborate a bit. Results: • First paragraph: The authors exclude a high proportion of identified studies; I would suggest mentioning the main reasons for exclusion, although these are also available from the PRISMA flowchart • Table 1 and Table 2: I suggest indenting the different types of interventions under “All trials” to make the table more legible. • Table 4a: The recruiting / completed variable is somewhat confusing. Completed could easily be interpreted as “trial completed” rather than “recruiting completed”. Discussion: • First paragraph: The first sentence is perhaps a bit too strongly worded, 770 RCTs were registered on the trial registries searched, there might be trials registered elsewhere. • Second paragraph, second line: delete “from” in “ongoing trials initiated from before the pandemic”. • Second paragraph, fourth line: Rephrase the following sentence “China published 30% of the protocols”. The trials were not registered by China but from China. Also again, these are not published protocols but registry entries. • Perhaps mention that such initiatives exist, e.g. the Living Meta-analysis from Cochrane France and others: https://covid-nma.com/ • Strengths and limitations: It is not mentioned in “methods” that data was extracted in duplicate. • Strengths and limitations: The authors use the term “quality parameters”. Firstly, it is unclear to me what this refers to, I suppose blinding but that is only one parameter. Secondly, I would suggest avoiding the term “quality” which is somewhat normative and just call it blinding status instead. • Strengths and limitations: I am unsure why including “unconventional medicine” would be controversial, it is an important part of the narrative of the research being conducted. Supplementary information: Appendix 2 and appendix 3 are called “Excluded articles” and “included articles”, however the unit of analysis is not articles but registry entries.
References 1 Hróbjartsson A, Pildal J, Chan A-W, et al. Reporting on blinding in trial protocols and corresponding publications was often inadequate but rarely contradictory. J Clin Epidemiol 2009;62:967–73. doi:10.1016/j.jclinepi.2009.04.003 2 Devereaux PJ, Manns BJ, Ghali WA, et al. Physician Interpretations and Textbook Definitions of Blinding Terminology in Randomized Controlled Trials. JAMA 2001;285:2000–3. doi:10.1001/jama.285.15.2000 Reviewer #2: This manuscript describes the results of a systematic search for registered drug trials in the WHO trial registry that assess prevention or treatment for COVID-19. This is important to provide an overview of ongoing research, as well as its characteristics and quality. The authors assess kkey components of the trials, such as number of participants, outcome measures, blinding, status for recruiting, etc. Overall, the methods and results are clearly presented and the authors use blinded data-extraction, a systematic search strategy, present a PRISMA flow-chart with reasons for exclusions, etc. My main concern is that the authors have likely not, as stated in the manuscript, assessed the actual protocols for the trials. Trial registries generally do not included detailed protocols but a set of key pieces of information, which is a pity. Lots of important information is missing that would allow a more thorough assessment of the quality of the ongoing trials than just binding, e.g. by applying the Cochrane risk of bias tool and assess whether the randosmisation process was adequate and likely to produce comparable groups. Given that I am correct about this, it might be necessary to change the terminology of the manuscript and explain that it is an evaluation of clinical trial registry forms rather than protocols and perhaps even use this to push for requirements to publish the full protocol along with the trial registry forms. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Asger Sand Paludan-Müller Reviewer #2: Yes: Karsten Juhl Jørgensen [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
Revision 1 |
A systematic review of trial registry entries for randomized clinical trials investigating COVID-19 medical prevention and treatment PONE-D-20-13626R1 Dear Dr. Karlsen, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Lisa Susan Wieland Academic Editor PLOS ONE Additional Editor Comments (optional): The comments of both reviewers have been addressed and the manuscript is much improved. Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors have answered all comments in detail - and have updated their search. Thus I am happy to recommend this paper for publication in PLoS One ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Asger Sand Paludan-Müller |
Formally Accepted |
PONE-D-20-13626R1 A systematic review of trial registry entries for randomized clinical trials investigating COVID-19 medical prevention and treatment Dear Dr. Karlsen: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Lisa Susan Wieland Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .