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Atomic structure of nickel phthalocyanine probed by X-ray absorption spectroscopy and density functional simulations

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Abstract

The local atomic structure of Ni in nickel phthalocyanine was studied by K-edge X-ray absorption fine structure spectroscopy. The obtained inter atomic nickel-nitrogen distance differs from the reference X-ray diffraction data so an additional study was performed within density functional theory framework. The justification of the used theoretical approach was provided by a comparison of theoretical free electron densities of states with experimental Ni K-edge X-ray absorption near edge spectra. The refined Ni local environment retain the reference structure of the molecule except for the length of Ni-N bond which increases to 1.90 Å.

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References

  1. F. Moser and A. Thomas, Phthalocyanine Compounds. Monograph Series (Reinhold, 1963).

    Google Scholar 

  2. D. Wohrle, Phthalocyanines: Properties and Applications (WILEY-VCH, 1993).

    Google Scholar 

  3. N. B. McKeown, Phthalocyanine Materials: Synthesis, Structure, and Function (Cambridge Univ. Press, Cambridge 1998).

    Google Scholar 

  4. J. M. Fox, T. J. Katz, S. van Elshocht, T. Verbiest, M. Kauranen, A. Persoons, T. Thongpanchang, T. Krauss, and L. Brus, J. Am. Chem. Soc. 121, 3453 (1999).

    Article  Google Scholar 

  5. S. M. O’Flaherty, S. V. Hold, M. J. Cook, T. Torres, Y. Chen, M. Hanack, and W. J. Blau, Adv. Mater. 15, 19 (2003).

    Article  Google Scholar 

  6. I. Rosenthal, Photochem. Photobiol. 53(6), 859 (1991).

    Google Scholar 

  7. E. A. Lukyanets, J. Porphyrins Phthalocyanines 3, 424 (1999).

    Article  Google Scholar 

  8. X. Li, N. J. Long, J. N. Clifford, C. J. Campbell, and J. R. Durrant, New J. Chem. 26, 1076 (2002).

    Article  Google Scholar 

  9. A. Boguta, D. Wrobel, T. J. Hoffmann, and P. Mazurkiewicz, Cryst. Res. Technol. 38, 267 (2003).

    Article  Google Scholar 

  10. A. S. Manukyan, A. A. Mirzakhanyan, T. I. Butaeva, A. A. Guda, A. V. Soldatov, L. A. Bugaev, H. R. Asatryan, P. G. Baranov, and E. G. Sharoyan, Armen. J. Phys. 3, 272 (2010).

    Google Scholar 

  11. J. M. Robertson and I. Woodward, J. Chem. Soc. 37, 219 (1937).

    Article  Google Scholar 

  12. V. Mastryukov, C. yu Ruan, M. Fink, Z. Wang, and R. Pachter, J. Mol. Struct. 556, 225 (2000).

    Article  ADS  Google Scholar 

  13. M.-S. Liao and S. Scheiner, J. Chem. Phys. 114, 9780 (2001).

    Article  ADS  Google Scholar 

  14. J. C. Speakman, Acta Crystallogr. 6, 784 (1953).

    Article  Google Scholar 

  15. C. J. Schramm, R. P. Scaringe, D. R. Stojakovic, B. M. Hoffman, J. A. Ibers, and T. J. Marks, J. Am. Chem. Soc. 102, 6702 (1980).

    Article  Google Scholar 

  16. A. A. Chernyshov, A. A. Veligzhanin, and Y. V. Zubavichus, Nucl. Instrum. Meth. Phys. Res., Ser. A 603, 95 (2009).

    Article  ADS  Google Scholar 

  17. I. B. Borovskii, R. V. Vedrinskii, V. L. Kraizman, and V. P. Sachenko, Usp. Fiz. Nauk 149(2), 275 (1986).

    Article  Google Scholar 

  18. D. Koningsberger and R. Prins, X-Ray Absorption: Principles, Applications, Techniques of EXAFS, SEXAFS, and XANES. Chemical Analysis (Wiley, New York, 1988), p. 688.

    Google Scholar 

  19. L. Bugaev, V. Shuvaeva, I. Alekseenko, K. Zhuchkov, and R. Vedrinskii, Phys. Solid State 40, 1001 (1998).

    Article  ADS  Google Scholar 

  20. B. Ravel and M. Newville, J. Synchrotron Rad. 12, 537 (2005).

    Article  Google Scholar 

  21. M. Newville, B. Ravel, D. Haskel, J. Rehr, E. Stern, and Y. Yacoby, Phys. B: Condensed Matter 208, 154 (1995).

    Article  ADS  Google Scholar 

  22. L. A. Bugaev, A. P. Sokolenko, H. V. Dmitrienko, and A.-M. Flank, Phys. Rev. B 65, 024105 (2001).

    Article  ADS  Google Scholar 

  23. A. V. Poiarkova and J. J. Rehr, Phys. Rev. B 59, 948 (1999).

    Article  ADS  Google Scholar 

  24. J. P. Perdew, K. Burke, and M. Ernzerhof, Phys. Rev. Lett. 78, 1396 (1997).

    Article  ADS  Google Scholar 

  25. X. Gonze, B. Amadon, P.-M. Anglade, J.-M. Beuken, F. Bottin, P. Boulanger, F. Bruneval, D. Caliste, R. Caracas, M. Cote, T. Deutsch, L. Genovese, Ph. Ghosez, M. Giantomassi, S. Goedecker, D. R. Hamann, P. Hermet, F. Jollet, G. Jomard, S. Leroux, M. Mancini, S. Mazevet, M. J. T. Oliveira, G. Onida, Y. Pouillon, T. Rangel, G.-M. Rignanese, D. Sangalli, R. Shaltaf, M. Torrent, M. J. Verstraete, G. Zerah, and J. W. Zwanziger, Comput. Phys. Commun. 180, 2582 (2009).

    Article  ADS  Google Scholar 

  26. X. Gonze, G. M. Rignanese, M. Verstraete, J.-M. Beuken, Y. Pouillon, R. Caracas, F. Jollet, M. Torrent, G. Zerah, M. Mikami, Ph. Ghosez, M. Veithen, J.-Y. Raty, V. Olevano, F. Bruneval, L. Reining, R. Godby, G. Onida, D. R. Hamann, and D. C. Allan, Zeit. Kristallogr. 220, 558 (2005).

    Article  Google Scholar 

  27. X. Gonze, J.-M. Beuken, R. Caracas, F. Detraux, M. Fuchs, G.-M. Rignanese, L. Sindic, M. Verstraete, G. Zerah, F. Jollet, M. Torrent, A. Roy, M. Mikami, Ph. Ghosez, J.-Y. Raty, and D. C. Allan, Comput. Mater. Sci. 25, 478 (2002).

    Article  Google Scholar 

  28. S. Goedecker, SIAM J. Sci. Comput. 18, 1605 (1997).

    Article  MathSciNet  MATH  Google Scholar 

  29. N. Troullier and J. L. Martins, Phys. Rev. B 43, 1993 (1991).

    Article  ADS  Google Scholar 

  30. M. Fuchs and M. Scheffler, Comput. Phys. Commun. 11, 67 (1999).

    Article  ADS  Google Scholar 

  31. C. G. Broyden, Math. Comp. 24, 365 (1970).

    Article  MathSciNet  MATH  Google Scholar 

  32. D. F. Shanno and P. C. Kettler, Math. Comp. 24, 657 (1970).

    Article  MathSciNet  Google Scholar 

  33. D. Goldfarb, Math. Comp. 24, 23 (1970).

    Article  MathSciNet  MATH  Google Scholar 

  34. D. Cabaret, A. Bordage, A. Juhin, M. Arfaoui, and E. Gaudry, Phys. Chem. Chem. Phys. 12, 5619 (2010).

    Article  Google Scholar 

  35. Y. Joly, Phys. Rev. B 63, 125120 (2001).

    Article  ADS  Google Scholar 

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Correspondence to L. A. Avakyan.

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Original Russian Text © L.A. Avakyan, A.S. Manukyan, A.A. Mirzakhanyan, E.G. Sharoyan, Y.V. Zubavichus, A.L. Trigub, N.A. Kolpacheva, L.A. Bugaev, 2013, published in Optika i Spektroskopiya, 2013, Vol. 114, No. 3, pp. 383–389.

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Avakyan, L.A., Manukyan, A.S., Mirzakhanyan, A.A. et al. Atomic structure of nickel phthalocyanine probed by X-ray absorption spectroscopy and density functional simulations. Opt. Spectrosc. 114, 347–352 (2013). https://doi.org/10.1134/S0030400X1303003X

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