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  • PANGAEA  (10)
  • 2010-2014  (10)
Document type
Keywords
Years
Year
  • 1
    Publication Date: 2023-03-07
    Description: The present study aimed to contribute to the knowledge on the intraspecific variations of enzyme activities in populations of Calanus finmarchicus from different longitudes across the North Atlantic Ocean and their relation to changing environmental conditions. C. finmarchicus was sampled across the North Atlantic in basins with decreasing temperature regimes from east to west (Iceland Basin, Irminger Basin and Labrador Basin) in late March/early April 2013. Potential maximum enzyme activities of digestive (proteinases and lipases/esterases) and metabolic (citrate synthase) enzymes of copepods from all sampling stations were analysed and thermal profiles (5-50°C) of enzyme activities were determined. In order to investigate its acclimation potential, C. finmarchicus were acclimated to 4°C and 15°C for two weeks and thermal profiles of enzyme activities were compared afterwards.
    Keywords: Basin Scale Analysis, Synthesis and Integration; EURO-BASIN
    Type: Dataset
    Format: application/zip, 3 datasets
    Location Call Number Limitation Availability
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  • 2
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    PANGAEA
    In:  Supplement to: Kreibich, Tobias; Saborowski, Reinhard; Hagen, Wilhelm; Niehoff, Barbara (2011): Influence of short-term nutritional variations on digestive enzyme and fatty acid patterns of the calanoid copepod Temora longicornis. Journal of Experimental Marine Biology and Ecology, 407(2), 182-189, https://doi.org/10.1016/j.jembe.2011.06.013
    Publication Date: 2023-10-28
    Description: Temora longicornis, a dominant calanoid copepod species in the North Sea, is characterised by low lipid reserves and high biomass turnover rates. To survive and reproduce successfully, this species needs continuous food supply and thus requires a highly flexible digestive system to exploit various food sources. Information on the capacity of digestive enzymes is scarce and therefore the aim of our study was to investigate the enzymatic capability to respond to quickly changing nutritional conditions. We conducted two feeding experiments with female T. longicornis from the southern North Sea off Helgoland. In the first experiment in 2005, we tested how digestive enzyme activities and enzyme patterns as revealed by substrate SDS-PAGE (sodium dodecylsulfate polyacrylamide gel electrophoresis) responded to changes in food composition. Females were incubated for three days fed ad libitum with either the heterotrophic dinoflagellate Oxyrrhis marina or the diatom Thalassiosira weissflogii. At the beginning and at the end of the experiment, copepods were deep-frozen for analyses. The lipolytic enzyme activity did not change over the course of the experiment but the enzyme patterns did, indicating a distinct diet-induced response. In a second experiment in 2008, we therefore focused on the enzyme patterns, testing how fast changes occur and whether feeding on the same algal species leads to similar patterns. In this experiment, we kept the females for 4 days at surplus food while changing the algal food species daily. At day 1, copepods were offered O. marina. On day 2, females received the cryptophycean Rhodomonas baltica followed by T. weissflogii on day 3. On day 4 copepods were again fed with O. marina. Each day, copepods were frozen for analysis by means of substrate SDS-PAGE. This showed that within 24 h new digestive enzymes appeared on the electrophoresis gels while others disappeared with the introduction of a new food species, and that the patterns were similar on day 1 and 4, when females were fed with O. marina. In addition, we monitored the fatty acid compositions of the copepods, and this indicated that specific algal fatty acids were quickly incorporated. With such short time lags between substrate availability and enzyme response, T. longicornis can successfully exploit short-term food sources and is thus well adapted to changes in food availability, as they often occur in its natural environment due seasonal variations in phyto- and microzooplankton distribution.
    Keywords: AWI; Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas; SPP1158
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2024-02-02
    Description: The prosome length of copepods from each station was measured on board with a dissecting microscope equipped with an ocular micrometer. Individuals were placed in pre-weighed tin caps and dried for 48 h at 60°C on board. Dry samples were transferred to the AWI and weighed again. Copepod dry mass was then calculated as the difference between the empty weight and the weight of the tin cap containing one individual. The content of carbon (C) and nitrogen (N) then was analysed with a CN-analyser (EuroEA Element Analyser, Hekatech) with acetanilide as standard.
    Keywords: Basin Scale Analysis, Synthesis and Integration; Carbon content per individual; Date/Time of event; D-MOC; Double opening/closing plankton net; Element analyser CNS, EURO EA; EURO-BASIN; Event label; Individual dry mass; Latitude of event; Life stage; Longitude of event; Maria S. Merian; Measured; MSM26; MSM26_126-9; MSM26_127-17; MSM26_131-17; MSM26_134-19; MSM26_135-16; MSM26_136-8; Nitrogen content per individual; North Atlantic; Prosome, length; Sample ID; Taxon/taxa; Uniform resource locator/link to reference; Weighted
    Type: Dataset
    Format: text/tab-separated-values, 1152 data points
    Location Call Number Limitation Availability
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  • 4
    Publication Date: 2024-02-02
    Description: The activities of proteinases, lipases/esterases and citrate synthase of Calanus finmarchicus copepodites (CV) were analysed. Analysis was performed at 30°C for copepods from seven stations (126-9, 127-17, 131-17, 133-6, 134-19, 135-16, 136-8). In addition, thermal profiles (5-50°C) of these enzymes were analysed for copepods from 3 stations (127-17, 133-6, 135-16). C. finmarchicus of station 127-19 have been acclimated on board to two different temperatures (4 and 15°C) for two weeks. Thermal profiles (5-60°C) of lipases/esterases and proteinases of adult females from each treatment were analysed. Groups of 10 individuals were used to prepare enzyme extracts for analysis. From each station/treatment, three groups were analysed, each of which was measured in triplicates. The activity of proteinases was determined photometrically after Saborowski et al. (2004, hdl:10013/epic.20836), modified after Kreibich et al. (2008, doi:10.1007/s10152-008-0112-0). Azocasein was used as substrate. The lypolytic activity of lipases and esterases in the extract was analysed fluorometrically after Knotz et al. (2006, doi:10.1016/j.cbpa.2006.07.019) using 4-methylumbelliferyl butyrate as substrate. Citrate synthase activity was analysed photometrically after Stitt (1984) modified by Saborowski and Buchholz (2002) with oxaloacetic acid as substrate. For detailed description please contact the author.
    Keywords: Absorbance of control; Absorbance of sample; Basin Scale Analysis, Synthesis and Integration; Citrate synthase activity, dry mass; Citrate synthase activity per individual; Date; Date/Time of event; Depth, bottom/max; Depth, top/min; DEPTH, water; D-MOC; Double opening/closing plankton net; EURO-BASIN; Event label; Latitude of event; Life stage; Lipase activity, dry mass; Lipase activity per individual; Longitude of event; Maria S. Merian; MSM26; MSM26_126-9; MSM26_127-17; MSM26_127-19; MSM26_131-17; MSM26_133-6; MSM26_134-19; MSM26_135-16; MSM26_136-8; North Atlantic; Number of individuals; Proteinase activity per dry mass, Delta extinction at 366 nm; Proteinase activity per individual, Delta extinction at 366 nm; Sample ID; Spectrophotometer Thermo Scientific UV1; Taxon/taxa; Treatment; Treatment: temperature; Uniform resource locator/link to reference; WP2; WP-2 towed closing plankton net
    Type: Dataset
    Format: text/tab-separated-values, 3564 data points
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2024-02-02
    Description: For the determination of water-soluble protein content of C. finmarchicus of the different stations the Qubit® Protein Assay Kit (Invitrogen) was used. Analysis was performed with extracts of 10 copepods. Working solution was prepared with Qubit® protein reagent and Qubit® protein buffer (1:200). 190 µL working solution was pipetted into each well of a micro plate and 10 µL of sample or Qubit® protein standard (0, 200 and 400 ng/µL) was added. Solutions were mixed and incubated for 15 min at room temperature. Measurements were conducted with a micro plate reader (TriStar LB 941, Berthold Technologies) at 485 nm excitation and 590 nm emission, using the software MikroWin2000 (Berthold Technologies).
    Keywords: Basin Scale Analysis, Synthesis and Integration; Date/Time of event; D-MOC; Double opening/closing plankton net; EURO-BASIN; Event label; Latitude of event; Life stage; Longitude of event; Maria S. Merian; MSM26; MSM26_126-9; MSM26_127-17; MSM26_131-17; MSM26_133-6; MSM26_134-19; MSM26_135-16; MSM26_136-8; North Atlantic; Number of individuals; Proteins per individual; Sample ID; Taxon/taxa; TriStar LB 941 Microplate Reader (Berthold Technologies); Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 126 data points
    Location Call Number Limitation Availability
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  • 6
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    PANGAEA
    In:  Supplement to: Niehoff, Barbara; Schmithüsen, Holger; Knüppel, Nadine; Daase, M; Czerny, Jan; Boxhammer, Tim (2013): Mesozooplankton community development at elevated CO2 concentrations: results from a mesocosm experiment in an Arctic fjord. Biogeosciences, 10(3), 1391-1406, https://doi.org/10.5194/bg-10-1391-2013
    Publication Date: 2024-03-15
    Description: The increasing CO2 concentration in the atmosphere caused by burning fossil fuels leads to increasing pCO2 and decreasing pH in the world ocean. These changes may have severe consequences for marine biota, especially in cold-water ecosystems due to higher solubility of CO2. However, studies on the response of mesozooplankton communities to elevated CO2 are still lacking. In order to test whether abundance and taxonomic composition change with pCO2, we have sampled nine mesocosms, which were deployed in Kongsfjorden, an Arctic fjord at Svalbard, and were adjusted to eight CO2 concentrations, initially ranging from 185 µatm to 1420 µatm. Vertical net hauls were taken weekly over about one month with an Apstein net (55 µm mesh size) in all mesocosms and the surrounding fjord. In addition, sediment trap samples, taken every second day in the mesocosms, were analysed to account for losses due to vertical migration and mortality. The taxonomic analysis revealed that meroplanktonic larvae (Cirripedia, Polychaeta, Bivalvia, Gastropoda, and Decapoda) dominated in the mesocosms while copepods (Calanus spp., Oithona similis, Acartia longiremis and Microsetella norvegica) were found in lower abundances. In the fjord copepods prevailed for most of our study. With time, abundance and taxonomic composition developed similarly in all mesocosms and the pCO2 had no significant effect on the overall community structure. Also, we did not find significant relationships between the pCO2 level and the abundance of single taxa. Changes in heterogeneous communities are, however, difficult to detect, and the exposure to elevated pCO2 was relatively short. We therefore suggest that future mesocosm experiments should be run for longer periods.
    Keywords: Acartia longiremis; Alkalinity, total; Aragonite saturation state; Arctic; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Biological sample; Biomass/Abundance/Elemental composition; BIOS; Bivalvia; Calanus sp., female; Calanus spp., c1; Calanus spp., c2; Calanus spp., c3; Calanus spp., c4; Calanus spp., c5; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, partial pressure; Cirripedia, cypris; Cirripedia, nauplii; Coast and continental shelf; Copepoda; DATE/TIME; Entire community; Euphausiidae; Experiment day; Field experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gastropoda; Kongsfjorden; Kongsfjorden, Spitsbergen, Arctic; Location type; Mesocosm or benthocosm; Microsetella norvegica; OA-ICC; Ocean Acidification International Coordination Centre; Oithona similis; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Polar; Polychaeta; Salinity; Sample code/label; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 6544 data points
    Location Call Number Limitation Availability
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  • 7
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    PANGAEA
    In:  Supplement to: Melle, Webjørn; Runge, Jeffrey A; Head, Erica J H; Plourde, Stéphane; Castellani, Claudia; Licandro, Priscilla; Pierson, James; Jónasdóttir, Sigrún Huld; Johnson, C; Broms, Cecilie; Debes, Høgni; Falkenhaug, Tone; Gaard, Eilif; Gislason, Astthor; Heath, Michael R; Niehoff, Barbara; Nielsen, Torkel Gissel; Pepin, Pierre; Stenevik, Erling Kaare; Chust, Guillem (2015): Biogeography of key mesozooplankton species in the North Atlantic and egg production of Calanus finmarchicus. Earth System Science Data, 7(2), 223-230, https://doi.org/10.5194/essd-7-223-2015
    Publication Date: 2024-03-23
    Description: Observations of egg production rates (EPR) for female Calanus finmarchicus were compared from different regions of the North Atlantic. The regions were diverse in size and sampling frequency, ranging from a fixed time series station in the Lower St Lawrence Estuary, off Rimouski, where nearly 200 experiments were carried out between May and December from 1994 to 2006, to a large-scale survey in the Northern Norwegian Sea, where about 50 experiments were carried out between April and June from 2002 to 2004. For this analysis the stations were grouped mostly along geographic lines, with only limited attention being paid to oceanographic features. There is some overlap between regions, however, where stations were sometimes kept together when they were sampled on the same cruise. As well some stations other than off Rimouski were occupied more than once during different years and/or in different seasons.
    Keywords: Area/locality; Basin Scale Analysis, Synthesis and Integration; Calanus finmarchicus, egg production rate, standard deviation; Calanus finmarchicus, egg production rate, standard error; Calanus finmarchicus, egg production rate per female; Calanus finmarchicus, eggs per clutch; Calanus finmarchicus, eggs per clutch, standard deviation; Calanus finmarchicus, eggs per clutch, standard error; Calanus finmarchicus, female, prosome length; Calanus finmarchicus, female, prosome length, standard deviation; Calanus finmarchicus, female, prosome length, standard error; Calanus finmarchicus, spawning frequency; Calanus finmarchicus, spawning frequency, standard deviation; Calanus finmarchicus, spawning frequency, standard error; Chlorophyll a, areal concentration; Chlorophyll a, standard deviation; Chlorophyll a, standard error; Depth, bottom/max; Depth, top/min; EURO-BASIN; LATITUDE; LONGITUDE; Number of measurements; Sampling date; Season; Temperature, water; Temperature, water, standard deviation; Temperature, water, standard error
    Type: Dataset
    Format: text/tab-separated-values, 1098 data points
    Location Call Number Limitation Availability
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  • 8
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    PANGAEA
    In:  Supplement to: Hildebrandt, Nicole; Niehoff, Barbara; Sartoris, Franz-Josef (2014): Long-term effects of elevated CO2 and temperature on the Arctic calanoid copepods Calanus glacialis and C. hyperboreus. Marine Pollution Bulletin, 80(1-2), 59-70, https://doi.org/10.1016/j.marpolbul.2014.01.050
    Publication Date: 2024-03-15
    Description: The sensitivity of copepods to ocean acidification (OA) and warming may increase with time, however, studies 〉10 days and on synergistic effects are rare. We therefore incubated late copepodites and females of two dominant Arctic species, Calanus glacialis and Calanus hyperboreus, at 0 °C at 390 and 3000 µatm pCO2 for several months in fall/winter 2010. Respiration rates, body mass and mortality in both species and life stages did not change with pCO2. To detect synergistic effects, in 2011 C. hyperboreus females were kept at different pCO2 and temperatures (0, 5, 10 °C). Incubation at 10 °C induced sublethal stress, which might have overruled effects of pCO2. At 5 °C and 3000 µatm, body carbon was significantly lowest indicating a synergistic effect. The copepods, thus, can tolerate pCO2 predicted for a future ocean, but in combination with increasing temperatures they could be sensitive to OA.
    Keywords: Alkalinity, total; Animalia; Aragonite saturation state; Arctic; Arthropoda; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Bottles or small containers/Aquaria (〈20 L); Calanus glacialis; Calanus hyperboreus; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbon/Nitrogen ratio; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon mass; Coulometric titration; Dry mass; Experiment day; Figure; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gonadal stage; Growth/Morphology; Laboratory experiment; Length; Life stage; Mortality; Mortality/Survival; Nitrogen mass; OA-ICC; Ocean Acidification International Coordination Centre; Open ocean; Oxygen consumption; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Polar; Potentiometric; Replicates; Reproduction; Respiration; Salinity; Salinity, standard deviation; Single species; Species; Temperature; Temperature, water; Temperature, water, standard deviation; Treatment; Treatment: temperature; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 51067 data points
    Location Call Number Limitation Availability
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  • 9
    Publication Date: 2024-05-15
    Keywords: 6,9,12,15-Hexadecatetraenoic acid of total fatty acids; 6,9,12-Hexadecatrienoic acid of total fatty acids; 9,12-Hexadecadienoic acid of total fatty acids; all-cis-4,7,10,13,16,19-Docosahexaenoic acid of total fatty acids; all-cis-5,8,11,14,17-Eicosapentaenoic acid of total fatty acids; all-cis-6,9,12,15-Octadecatetraenoic acid of total fatty acids; all-cis-9,12,15-Octadecatrienoic acid of total fatty acids; Carbon/Nitrogen ratio; Carbon/Nitrogen ratio, standard deviation; Carbon content per individual; cis-11-Icosenoic acid of total fatty acids; cis-11-Octadecenoic acid of total fatty acids (IUPAC: Octadec-11-enoic acid); cis-15-Tetracosenoic acid of total fatty acids; cis-9-Hexadecenoic acid of total fatty acids (IUPAC: (9Z)-hexadec-9-enoic acid); cis-9-Octadecenoic acid of total fatty acids (IUPAC: Octadec-9-enoic acid); Dry mass, standard deviation; Dry mass per individual; Experiment day; Fatty acids, standard deviation; Hexadecanoic acid of total fatty acids; Lipids, standard deviation; Lipids per individual; Monounsaturated fatty acids of total fatty acids; Nitrogen content per individual; Octadecanoic acid of total fatty acids; Octadecatetraenoic acid 18:4(n-4) of total fatty acids; Polyunsaturated fatty acids of total fatty acids; Saturated fatty acids of total fatty acids; Sex; Species; Standard deviation; Tetradecanoic acid of total fatty acids; Treatment: food
    Type: Dataset
    Format: text/tab-separated-values, 225 data points
    Location Call Number Limitation Availability
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  • 10
    Publication Date: 2024-05-15
    Keywords: 6,9,12-Hexadecatrienoic acid of total fatty acids; 9,12-Hexadecadienoic acid of total fatty acids; 9-Tetradecenoic acid of total fatty acids; all-cis-4,7,10,13,16,19-Docosahexaenoic acid of total fatty acids; all-cis-5,8,11,14,17-Eicosapentaenoic acid of total fatty acids; all-cis-6,9,12,15-Octadecatetraenoic acid of total fatty acids; all-cis-7,10,13,16,19-Docosapentaenoic acid of total fatty acids; all-cis-9,12,15-Octadecatrienoic acid of total fatty acids; all-cis-9,12-Octadecadienoic acid of total fatty acids; Carbon, organic, total; Carbon, organic, total, standard deviation; Carbon/Nitrogen ratio; Carbon/Nitrogen ratio, standard deviation; cis-11-Icosenoic acid of total fatty acids; cis-11-Octadecenoic acid of total fatty acids (IUPAC: Octadec-11-enoic acid); cis-13-Octadecenoic acid of total fatty acids; cis-7-Hexadecenoic acid of total fatty acids; cis-9-Hexadecenoic acid of total fatty acids (IUPAC: (9Z)-hexadec-9-enoic acid); cis-9-Octadecenoic acid of total fatty acids (IUPAC: Octadec-9-enoic acid); Fatty acids, standard deviation; Hexadecanoic acid of total fatty acids; Monounsaturated fatty acids of total fatty acids; Nitrogen, organic; Nitrogen, organic, standard deviation; Octadecanoic acid of total fatty acids; Octadecatetraenoic acid 18:4(n-4) of total fatty acids; Pentadecanoic acid of total fatty acids; Polyunsaturated fatty acids of total fatty acids; Sample type; Saturated fatty acids of total fatty acids; Tetradecanoic acid of total fatty acids
    Type: Dataset
    Format: text/tab-separated-values, 189 data points
    Location Call Number Limitation Availability
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