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  • Berlin, Heidelberg :Springer Berlin / Heidelberg,  (6)
  • AGU (American Geophysical Union)  (3)
  • 1
    Online Resource
    Online Resource
    Berlin, Heidelberg :Springer Berlin / Heidelberg,
    Keywords: Climatic changes. ; Climatic changes -- Environmental aspects. ; Electronic books.
    Type of Medium: Online Resource
    Pages: 1 online resource (103 pages)
    Edition: 1st ed.
    ISBN: 9783642239328
    Series Statement: SpringerBriefs in Earth System Sciences Series
    DDC: 551.6015118
    Language: English
    Note: Intro -- Earth System Modelling -Volume 5 -- Preface -- Acknowledgments -- Contents -- Contributors -- 1 Introduction -- 2 ESM Workflow -- 2.1 What is a Workflow? -- 2.2 Example: FRE, the FMS Runtime Environment -- 2.3 Discussion: Workflows and Curators -- References -- 3 Applying Scientific Workflow to ESM -- 3.1 Use Case and its Requirements -- 3.2 Components of the Use Case -- 3.2.1 Computing Environment and Extensions -- 3.2.2 Kepler Scientific Workflow System and Extensions -- 3.3 Conclusion -- 3.4 Future Directions -- References -- 4 Configuration Management and Version Control in Earth System Modelling -- 4.1 Introduction -- 4.2 Role 1. The Infrastructure Developer and Supporter -- 4.3 Role 2. The Scientific Developer -- 4.4 Role 3. The Configuration Developer Team -- 4.5 Role 4. The Configuration Manager -- 4.6 Role 5. The Model Release Manager -- 4.7 Collaborative Developer -- 4.8 Summary and Discussion -- References -- 5 Building Earth System Models -- 5.1 Requirements -- 5.2 Methods to Accelerate the Build -- 5.3 The `Make' Utility -- 5.4 Example: The SCE Build System -- 5.5 Discussion -- References -- 6 Running and Monitoring -- 6.1 Introduction -- 6.2 General Architectural Principles of Job Scheduling Systems -- 6.3 Requirements -- 6.4 Tools Available at Major Climate Research Centers -- 6.4.1 SMS -- 6.4.2 Installation and Hardware Support -- 6.4.3 Task Definition Language -- 6.4.4 Macro Variables -- 6.4.5 Dependency Declaration -- 6.4.6 Starting Tasks -- 6.4.7 Special Large Installation Features -- 6.4.8 A Use Case -- 6.5 XCdp GUI -- 6.5.1 Main Monitoring View -- 6.5.2 Task View -- 6.5.3 Security -- 6.6 Ant and Frameworks -- 6.7 Job Scheduler -- 6.8 Conclusion -- 6.9 Future Directions -- 7 Configuring, Building and Running Models in GENIE -- 7.1 Access to the Modelling Framework -- 7.2 Model Configuration -- 7.3 Building. , 7.4 Running and Monitoring -- 7.5 Discussion -- References -- 8 Configuring, Building and Running Models in CIAS -- 8.1 Introduction -- 8.2 CIAS Framework -- 8.3 Experiment Configuration and Execution -- 8.4 Conclusion and Future Development -- References -- 9 Summary and Conclusions -- Glossary -- Index.
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  • 2
    Online Resource
    Online Resource
    Berlin, Heidelberg :Springer Berlin / Heidelberg,
    Keywords: Dynamic climatology -- Mathematical models. ; Electronic books.
    Type of Medium: Online Resource
    Pages: 1 online resource (97 pages)
    Edition: 1st ed.
    ISBN: 9783642372445
    Series Statement: SpringerBriefs in Earth System Sciences Series
    DDC: 550
    Language: English
    Note: Intro -- Preface -- Contents -- Contributors -- 1 ESM Data Archives in Times of the Grid -- Reference -- 2 Distributed Archives, Databases and Data Portals: The Scene -- References -- 3 Harvesting of Metadata with Open Access Tools -- 3.1 Background and Motivation -- 3.2 The Metadata Portal Framework ``panFMP'' -- 3.3 Adoption of the Framework in C3Grid -- 3.4 Conclusion -- References -- 4 Data Discovery: Identifying, Searching and Finding Data -- 4.1 Overview and Definition of Terminology -- 4.2 ESM Data Discovery Challenges -- 4.2.1 Data Product Granularity and Aggregation -- 4.2.2 Data Provenance and Scientific Context -- 4.2.3 Data Lifetime and Quality -- 4.2.4 Data Volume and Data Distribution -- 4.2.5 Interdisciplinarity and Heterogeneity of Data Discovery Use Cases -- 4.2.6 Search Scalability and Flexibility -- 4.3 Generic Data Discovery Architecture -- 4.4 Implementation Standards -- 4.4.1 Metadata Standards and Initiative: -- 4.4.2 Metadata Exchange and Discovery Protocol Standard -- 4.4.3 Standardization of Registries -- 4.5 Data Discovery Architectures in the Times of the Grid -- 4.5.1 NERC Data Grid -- 4.5.2 C3Grid -- 4.5.3 Earth System Grid (ESG) -- 4.5.4 The European Distributed ESM Data Archive -- 4.6 Summary -- References -- 5 User Driven Data Access Mechanisms -- 5.1 Existing Data Access Solutions in ESM -- 5.2 Technical Solutions for Data Access -- 5.3 Aspects of Local Implementations -- 5.4 Future Developments -- 5.5 Conclusions -- References -- 6 Collaborative Climate Community Data and Processing Grid---C3Grid: Workflows for Data Selection, Pre- and Post-Processing in a Distributed Environment -- 6.1 General Remarks -- 6.2 Architecture and Middleware Components -- 6.2.1 C3Grid Portal -- 6.2.2 Data Information Service and Metadata -- 6.2.3 Collaborative Workspace and Data Management Service. , 6.2.4 Workflow Scheduling Service -- 6.2.5 Provider Layer: Data Archive and Compute Resources -- 6.3 Workflows -- 6.4 Status and Perspectives -- References -- 7 Earth System Grid Federation: Federated and Integrated Climate Data from Multiple Sources -- 7.1 Background -- 7.2 Science Drivers -- 7.2.1 Typical ESGF Facility: PCMDI LLNL -- 7.2.2 Enhancing the Process of Science -- 7.3 Data Quality and Publishing in an International Setting -- 7.4 Data Intensive Climate Science -- 7.5 Data, Workflow, Middleware Tools, and Services -- 7.6 Outstanding Issues -- 7.7 Summary -- 8 Future Perspectives -- Glossary -- Index.
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  • 3
    Online Resource
    Online Resource
    Berlin, Heidelberg :Springer Berlin / Heidelberg,
    Keywords: Earth sciences -- Computer simulation. ; Geology -- Computer simulation. ; Electronic books.
    Type of Medium: Online Resource
    Pages: 1 online resource (64 pages)
    Edition: 1st ed.
    ISBN: 9783642365973
    Series Statement: SpringerBriefs in Earth System Sciences Series
    DDC: 551.6
    Language: English
    Note: Intro -- Earth System Modelling - Volume 1 -- Preface -- Contents -- Contributors -- 1 Recent Developments and Projects -- References -- 2 The Infrastructure Project of the European Network for Earth System Modelling: IS-ENES -- 2.1 General Overview -- 2.2 Rationale and History -- 2.3 Partnerships and Organization -- 2.4 Overview of Results -- 2.5 Users -- 2.6 Future Plans -- References -- 3 The METAFOR Project -- 3.1 General Overview -- 3.2 Rationale and History -- 3.3 Partnerships and Organization -- 3.4 Overview of Results -- 3.4.1 Common Information Model (CIM) -- 3.4.2 CMIP5 Questionnaire -- 3.4.3 CIM Web Portal -- 3.4.4 CIM Web Services -- 3.4.5 CIM Tools -- 3.5 Users -- 3.6 Future Plans -- Reference -- 4 The European PRISM Network -- 4.1 General Overview -- 4.2 Rationale and History -- 4.3 Partnerships and Organization -- 4.4 Overview of Results -- 4.5 Users -- 4.6 Conclusions -- Reference -- 5 The Earth System Modeling Framework -- 5.1 General Overview -- 5.2 Rationale and History -- 5.3 Partnerships and Organization -- 5.4 Technical Strategy -- 5.5 Overview of Results -- 5.6 Future Plans -- 6 The Grid ENabled Integrated Earth System Modelling (GENIE) Framework -- 6.1 Rationale and History -- 6.2 Partnership and Organization -- 6.3 Overview of Results -- 6.3.1 Version Control, Build and Test -- 6.3.2 Model Coupling and Configuration -- 6.3.3 Grid-Enabled Problem Solving Environment -- 6.4 Users -- 6.5 Future Plans -- References -- 7 K-1(Kyosei) Project -- 7.1 General Overview -- 7.2 Rationale and History -- 7.3 Partnership and Organization -- 7.4 Overview of Results -- 7.4.1 Programming Structure -- 7.4.2 Scientific Results -- 7.5 Users -- 7.6 Future Plans -- References -- 8 CCSM -- 8.1 General Overview -- 8.2 Rationale and History -- 8.3 Partnerships and Organization -- 8.4 Overview of Results -- 8.5 Users -- 8.6 Future Plans. , References -- Glossary -- Index.
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  • 4
    Online Resource
    Online Resource
    Berlin, Heidelberg :Springer Berlin / Heidelberg,
    Keywords: Model-integrated computing. ; Electronic books.
    Type of Medium: Online Resource
    Pages: 1 online resource (86 pages)
    Edition: 1st ed.
    ISBN: 9783642233609
    Series Statement: SpringerBriefs in Earth System Sciences Series
    DDC: 551.6015118
    Language: English
    Note: Intro -- Earth System Modelling -Volume 3 -- Preface -- Acknowledgments -- Contents -- Contributors -- 1 Introduction -- 2 TDT: A Library for Typed Data Transfer -- 2.1 Introduction -- 2.2 Architectural Overview -- Ease of Use -- Portability -- Efficiency -- Flexibility -- Usefulness -- 2.3 Benefits and Limitations of TDT -- Data Types -- Size of Data -- Transfer Mechanism -- Byte Swapping -- Limitations of TDT -- 2.4 Model Coupling with TDT -- 2.5 TDT in Practice -- 2.5.1 The Data Description File -- 2.5.2 The Configuration File -- 2.5.3 Implementation in the Original Codes -- 2.6 Additional Technical Details -- 2.7 Conclusions and Perspectives -- 3 The Model Coupling Toolkit -- 3.1 Introduction -- 3.2 Architectural Overview and Programming Philosophy -- 3.3 MCT Datatypes and Methods -- 3.4 MCT Multi-Language Interface -- 3.5 Conclusions and Perspectives -- References -- 4 The OASIS Coupler -- 4.1 Introduction -- 4.2 Architectural Overview -- 4.3 Coupling Configuration -- 4.4 Process Management -- 4.5 Communication: The OASIS PSMILe Library -- 4.6 Coupling Field Transformation and Regridding -- 4.6.1 Transformation and Regridding in OASIS3 -- 4.6.2 Transformation and Regridding in OASIS4 -- 4.7 Performances -- 4.8 User Community -- 4.9 Conclusions and Perspectives -- References -- 5 The Flexible Modeling System -- 5.1 Introduction: The Emergence of Modeling Frameworks -- 5.2 Architectural Overview -- 5.3 Physical Architecture of FMS Coupled System -- 5.4 The Exchange Grid -- 5.5 Data Assimilation -- 5.6 Conclusions and Perspectives -- References -- 6 The Earth System Modeling Framework -- 6.1 Introduction -- 6.2 Architectural Overview -- 6.3 Components in ESMF -- 6.4 Remapping in ESMF -- 6.5 Adopting ESMF -- 6.5.1 Wrapping User Code in ESMF Components -- 6.5.2 Adapting Data Structures -- 6.5.3 Registering User Methods. , 6.5.4 Coupling Between ESMF Components -- 6.5.5 Executing the Application -- 6.6 Alternative Forms of Coupling -- 6.7 Conclusions and Perspective -- References -- 7 The Bespoke Framework Generator -- 7.1 Introduction -- 7.2 Architectural Overview -- 7.3 BFG1 -- 7.4 BFG2 -- 7.4.1 Argument Passing -- 7.4.2 Subroutine Entry Points -- 7.4.3 Scientific API -- 7.4.4 Initialisation -- 7.4.5 Control -- 7.4.6 XSLT Implementation -- 7.4.7 Frameworks as Targets -- 7.4.8 Grids -- 7.4.9 The GENIE ESM---An Example -- 7.5 Related Systems -- 7.6 Conclusions and Perspectives -- References -- 8 Future Perspectives -- Glossary -- Index.
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  • 5
    Online Resource
    Online Resource
    Berlin, Heidelberg :Springer Berlin / Heidelberg,
    Keywords: Climatology -- Mathematical models. ; Electronic books.
    Type of Medium: Online Resource
    Pages: 1 online resource (66 pages)
    Edition: 1st ed.
    ISBN: 9783642364648
    Series Statement: SpringerBriefs in Earth System Sciences Series
    DDC: 550
    Language: English
    Note: Intro -- Earth System Modelling - Volume 4 -- Preface -- Contents -- Contributors -- 1 Input/Output and Postprocessing -- 2 Parallel I/O Basics -- 2.1 The I/O Software Stack -- 2.2 Parallel File Systems -- 2.3 MPI-IO -- 2.4 Data Format Libraries -- 2.5 Applying I/O Lessons to Applications -- 2.6 Parallel I/O Today and Tomorrow -- References -- 3 ESM I/O Layers -- 3.1 ESM I/O Layers: Design Considerations -- 3.2 An ESM Parallel I/O Class Library -- 3.2.1 mpp_io -- 3.2.2 Other ESM Parallel I/O Libraries -- 3.3 ESM Post-Processing Tools and Libraries -- 3.4 Discussion -- References -- 4 Data Storage -- 4.1 Hierarchical Storage Management: An Introduction -- 4.2 An Abstraction for HSMs: A Three-Level Storage Model -- 4.3 Discussion: HSM Strategies -- References -- 5 Data Representation -- 5.1 Scientific Data File Formats -- 5.1.1 NetCDF -- 5.1.2 HDF -- 5.1.3 GRIB -- 5.2 Remote Data Access -- 5.2.1 Bulk Access -- 5.2.2 Remote Subsetting in Index Space -- 5.2.3 Remote Subsetting in Coordinate Space -- 5.3 Georeferencing Coordinate Systems and Metadata -- 5.3.1 CF Conventions -- 5.3.2 Other Georeferencing Conventions -- 5.3.3 Discovery Versus Use Metadata -- 5.4 Data Models -- 5.4.1 ISO/OGC Models -- 5.5 Data Aggregation -- 5.6 Case Study: Attribution and Detection -- References -- 6 Data Analysis and Visualization -- 6.1 Background and History -- 6.2 The Analysis Process -- 6.3 Current Platforms Used for Data Analysis and Visualization -- 6.4 Community Tools and Environments -- 6.5 Use Case Example -- 6.6 Future Challenges and Directions -- 7 Future Perspectives -- References -- Glossary -- Index.
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  • 6
    Online Resource
    Online Resource
    Berlin, Heidelberg :Springer Berlin / Heidelberg,
    Keywords: Earth sciences -- Computer simulation. ; Electronic books.
    Type of Medium: Online Resource
    Pages: 1 online resource (101 pages)
    Edition: 1st ed.
    ISBN: 9783642238314
    Series Statement: SpringerBriefs in Earth System Sciences Series
    DDC: 551.6015118
    Language: English
    Note: Intro -- Earth System Modelling - Volume 2 -- Preface -- Contents -- Contributors -- 1 Overview -- 2 Numerical Algorithms for ESM: State of the Art -- 2.1 Space Discretization: Finite Difference and Finite Volume Methods -- 2.2 Space Discretization: Spectral Transform Methods -- 2.3 Time Discretizations -- 2.4 Numerical Algorithms for Parameterized Physical Processes -- References -- 3 Numerical Algorithms for ESM: Future Perspectives for Atmospheric Modelling -- References -- 4 Numerical Algorithms for ESM: Future Perspectives for Ocean Modelling -- 4.1 Finite Element and Finite-Volume Methods -- 4.2 An Incomplete Overview -- 4.3 Challenges of Unstructured Grids -- 4.4 Conclusions -- References -- 5 Efficiency for Adaptive Triangular Meshes: Key Issues of Future Approaches -- 5.1 Introduction -- 5.1.1 Quadrilateral vs. Triangular Meshes -- 5.1.2 Applications Suitable for Adaptive Meshing -- 5.1.3 Key Challenges for Adaptive Triangular Meshes and Solvers -- 5.2 Triangular Mesh Generation -- 5.2.1 Delaunay Triangulations -- 5.2.2 Hierarchical Triangulations -- 5.2.3 Data Structures -- 5.3 Adaptive Mesh Control -- 5.3.1 Error Estimation Concepts -- 5.3.2 Refinement Strategies -- 5.4 Optimisation of Hierarchical Triangular Mesh Computations -- 5.4.1 Linearization with Space-Filling Curves -- 5.5 Example of an Adaptive Mesh Refinement Computation -- References -- 6 Code Design and Quality Control -- 6.1 Design for Sustainability -- 6.2 Software Coding Standards -- 6.3 Version Control -- 6.4 Other Tools to Support Coding -- 6.5 Code Reviews -- 6.6 Verification and Validation for ESM -- 6.7 Model Intercomparisons -- 6.8 Assessments of Model Quality -- References -- 7 Code Optimisation -- 7.1 Application Portability -- 7.2 Profiling -- 7.3 Compiler Optimisation -- 7.4 Optimisations for Vector, Scalar and Cache-Based Architectures. , 7.4.1 Use Stride 1 -- 7.4.2 Avoid Stores -- 7.4.3 Remove Divides -- 7.4.4 Remove IFs -- 7.4.5 Optimisations for Cache -- References -- 8 Code Parallelisation On Massively Parallel Machines -- 8.1 Introduction to Parallel Computing -- 8.2 A General Communication and Synchronization Model for Parallel systems -- 8.3 Parallel Programming Models -- 8.4 Simplifying the Expression of Parallelism -- References -- 9 Future Perspectives -- References -- Glossary -- Index.
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  • 7
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    AGU (American Geophysical Union)
    In:  Journal of Geophysical Research: Oceans, 102 (C8) . pp. 18529-18552.
    Publication Date: 2019-09-23
    Description: An ocean circulation model for process studies of the Subpolar North Atlantic is developed based on the Geophysical Fluid Dynamics Laboratory (GFDL) Modular Ocean Model (MOM) code. The basic model configuration is identical with that of the high-resolution model (with a grid size of 1/3° × 2/5°) of the World Ocean Circulation Experiment (WOCE) Community Modeling Effort (CME), except that the domain of integration is confined to the area from 43° to 65°N. Open boundary conditions are used for the inflows and outflows across the northern and southern boundaries. A comparison with the CME model covering the whole North Atlantic (from 15°S to 65°N) shows that the regional model, with inflow conditions at 43°N from a CME solution, is able to reproduce the CME results for the subpolar area. Thus the potential of a regional model lies in its use as an efficient tool for numerical experiments aiming at an identification of the key physical processes that determine the circulation and water mass transformations in the subpolar gyre. This study deals primarily with the representation and role of the overflow waters that enter the domain at the northern boundary. Sensitivity experiments show the effect of closed versus open boundaries, of different hydrographic conditions at inflow points, and of the representation of the narrow Faeroe Bank Channel. The representation of overflow processes in the Denmark Strait is the main controlling mechanism for the net transport of the deep boundary current along the Greenland continental slope and further downstream. Changes in the Faeroe Bank Channel throughflow conditions have a comparatively smaller effect on the deep transport in the western basin but strongly affect the water mass characteristics in the eastern North Atlantic. The deep water transport at Cape Farewell and further downstream is enhanced compared to the combined Denmark Strait and Iceland-Scotland overflows. This enhancement can be attributed to a barotropic recirculation in the Irminger Basin which is very sensitive to the outflow conditions in the Denmark Strait. The representation of both overflow regions determine the upper layer circulation in the Irminger and Iceland Basins, in particular the path of the North Atlantic Current.
    Type: Article , PeerReviewed
    Format: text
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  • 8
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    AGU (American Geophysical Union)
    In:  Journal of Geophysical Research: Oceans, 108 (C5). p. 3159.
    Publication Date: 2018-04-18
    Description: A series of numerical experiments with models of the Atlantic Ocean is analyzed with respect to the uptake of CFC‐11 and its export from the subpolar gyre with the North Atlantic Deep Water. We discuss the influence of parameterizations for air‐sea gas exchange and subgrid‐scale processes on the rate of CFC‐11 that enters the North Atlantic Ocean and its dependence on horizontal grid spacing in models from medium (4/3°) to eddy‐permitting (1/3°) horizontal resolution. Model results are compared with observational estimates of tracer inventories in order to evaluate to what degree the simulations capture realistic CFC distributions. While higher resolution is needed to model details of the CFC distribution, for example, in the Deep Western Boundary Current, the medium resolution models are able to simulate quantitatively satisfying CFC inventories in different water masses. Nevertheless, the inventories derived from the medium‐resolution experiments show a critical dependence on details of the parameterization of the mixing effect of mesoscale eddies and on the representation of bottom boundary layer processes. The numerical representation of eddy activity turns out to be of crucial importance in order to obtain modeled CFC inventories in agreement with observed values, which can be achieved either by carefully choosing the mixing parameterization or by applying higher horizontal resolution. The ratio of CFC‐11 being exported southward from the subpolar North Atlantic to the total CFC‐11 inventory in NADW does not vary significantly over the suite of model experiments.
    Type: Article , PeerReviewed
    Format: text
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  • 9
    Publication Date: 2023-01-03
    Description: A new release of the Max Planck Institute for Meteorology Earth System Model version 1.2 (MPI-ESM1.2) is presented. The development focused on correcting errors in and improving the physical processes representation, as well as improving the computational performance, versatility, and overall user friendliness. In addition to new radiation and aerosol parameterizations of the atmosphere, several relatively large, but partly compensating, coding errors in the model's cloud, convection, and turbulence parameterizations were corrected. The representation of land processes was refined by introducing a multilayer soil hydrology scheme, extending the land biogeochemistry to include the nitrogen cycle, replacing the soil and litter decomposition model and improving the representation of wildfires. The ocean biogeochemistry now represents cyanobacteria prognostically in order to capture the response of nitrogen fixation to changing climate conditions and further includes improved detritus settling and numerous other refinements. As something new, in addition to limiting drift and minimizing certain biases, the instrumental record warming was explicitly taken into account during the tuning process. To this end, a very high climate sensitivity of around 7 K caused by low-level clouds in the tropics as found in an intermediate model version was addressed, as it was not deemed possible to match observed warming otherwise. As a result, the model has a climate sensitivity to a doubling of CO2 over preindustrial conditions of 2.77 K, maintaining the previously identified highly nonlinear global mean response to increasing CO2 forcing, which nonetheless can be represented by a simple two-layer model.
    Type: Article , PeerReviewed
    Format: text
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