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  • 2005-2009  (51)
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  • 1
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    Unknown
    PANGAEA
    In:  Supplement to: Hansen, Per Juel; Lundholm, Nina; Rost, Björn (2007): Growth limitation in marine red-tide dinoflagellates: effects of pH versus inorganic carbon availability. Marine Ecology Progress Series, 334, 63-71, https://doi.org/10.3354/meps334063
    Publication Date: 2023-07-07
    Description: The effects of dissolved inorganic carbon (DIC) on the growth of 3 red-tide dinoflagellates (Ceratium lineatum, Heterocapsa triquetra and Prorocentrum minimum) were studied at pH 8.0 and at higher pH levels, depending upon the pH tolerance of the individual species. The higher pH levels chosen for experiments were 8.55 for C. lineatum and 9.2 for the other 2 species. At pH 8.0, which approximates the pH found in the open sea, the maximum growth in all species was maintained until the total DIC concentration was reduced below ~0.4 and 0.2 mM for C. lineatum and the other 2 species, respectively. Growth compensation points (concentration of inorganic carbon needed for maintenance of cells) were reached at ~0.18 and 0.05 mM DIC for C. lineatum and the other 2 species, respectively. At higher pH levels, maximum growth rates were lower compared to growth at pH 8, even at very high DIC concentrations, indicating a direct pH effect on growth. Moreover, the concentration of bio-available inorganic carbon (CO2 + HCO3-) required for maintenance as well as the half-saturation constants were increased considerably at high pH compared to pH 8.0. Experiments with pH-drift were carried out at initial concentrations of 2.4 and 1.2 mM DIC to test whether pH or DIC was the main limiting factor at a natural range of DIC. Independent of the initial DIC concentrations, growth rates were similar in both incubations until pH had increased considerably. The results of this study demonstrated that growth of the 3 species was mainly limited by pH, while inorganic carbon limitation played a minor role only at very high pH levels and low initial DIC concentrations.
    Keywords: Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Ceratium lineatum; Chromista; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; EXP; Experiment; Growth/Morphology; Hansen_etal_07/F1; Hansen_etal_07/F2; Laboratory experiment; Laboratory strains; Myzozoa; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Pelagos; Phytoplankton; Prorocentrum minimum; Single species
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2024-03-15
    Description: The effects of dissolved inorganic carbon (DIC) on the growth of 3 red-tide dinoflagellates (Ceratium lineatum, Heterocapsa triquetra and Prorocentrum minimum) were studied at pH 8.0 and at higher pH levels, depending upon the pH tolerance of the individual species. The higher pH levels chosen for experiments were 8.55 for C. lineatum and 9.2 for the other 2 species. At pH 8.0, which approximates the pH found in the open sea, the maximum growth in all species was maintained until the total DIC concentration was reduced below ~0.4 and 0.2 mM for C. lineatum and the other 2 species, respectively. Growth compensation points (concentration of inorganic carbon needed for maintenance of cells) were reached at ~0.18 and 0.05 mM DIC for C. lineatum and the other 2 species, respectively. At higher pH levels, maximum growth rates were lower compared to growth at pH 8, even at very high DIC concentrations, indicating a direct pH effect on growth. Moreover, the concentration of bio-available inorganic carbon (CO2 + HCO3-) required for maintenance as well as the half-saturation constants were increased considerably at high pH compared to pH 8.0. Experiments with pH-drift were carried out at initial concentrations of 2.4 and 1.2 mM DIC to test whether pH or DIC was the main limiting factor at a natural range of DIC. Independent of the initial DIC concentrations, growth rates were similar in both incubations until pH had increased considerably. The results of this study demonstrated that growth of the 3 species was mainly limited by pH, while inorganic carbon limitation played a minor role only at very high pH levels and low initial DIC concentrations.
    Keywords: Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated using seacarb after Nisumaa et al. (2010); Caratium lineatum; Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chromista; Density, mass density; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Hansen_etal_07/F1; Heterocapsa triquetra; Infrared gas analyser (ADC, MK3); Laboratory experiment; Laboratory strains; Light:Dark cycle; Measured; Myzozoa; PAR sensor LI-1000, LI-COR Inc.; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH meter (Sentron, Argus X); Phytoplankton; Prorocentrum minimum; Radiation, photosynthetically active; Salinity; Single species; Species; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 1349 data points
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2024-03-15
    Description: The effects of dissolved inorganic carbon (DIC) on the growth of 3 red-tide dinoflagellates (Ceratium lineatum, Heterocapsa triquetra and Prorocentrum minimum) were studied at pH 8.0 and at higher pH levels, depending upon the pH tolerance of the individual species. The higher pH levels chosen for experiments were 8.55 for C. lineatum and 9.2 for the other 2 species. At pH 8.0, which approximates the pH found in the open sea, the maximum growth in all species was maintained until the total DIC concentration was reduced below ~0.4 and 0.2 mM for C. lineatum and the other 2 species, respectively. Growth compensation points (concentration of inorganic carbon needed for maintenance of cells) were reached at ~0.18 and 0.05 mM DIC for C. lineatum and the other 2 species, respectively. At higher pH levels, maximum growth rates were lower compared to growth at pH 8, even at very high DIC concentrations, indicating a direct pH effect on growth. Moreover, the concentration of bio-available inorganic carbon (CO2 + HCO3-) required for maintenance as well as the half-saturation constants were increased considerably at high pH compared to pH 8.0. Experiments with pH-drift were carried out at initial concentrations of 2.4 and 1.2 mM DIC to test whether pH or DIC was the main limiting factor at a natural range of DIC. Independent of the initial DIC concentrations, growth rates were similar in both incubations until pH had increased considerably. The results of this study demonstrated that growth of the 3 species was mainly limited by pH, while inorganic carbon limitation played a minor role only at very high pH levels and low initial DIC concentrations.
    Keywords: Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Biomass/Abundance/Elemental composition; Calcite saturation state; Calculated; Calculated using seacarb after Nisumaa et al. (2010); Caratium lineatum; Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chromista; Counted in Sedgewick-Rafter chamber; Density, mass density; Dinoflagellates; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Hansen_etal_07/F2; Heterocapsa triquetra; Infrared gas analyser (ADC, MK3); Laboratory experiment; Laboratory strains; Light:Dark cycle; Measured; Myzozoa; PAR sensor LI-1000, LI-COR Inc.; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH meter (Sentron, Argus X); Phytoplankton; Prorocentrum minimum; Radiation, photosynthetically active; Salinity; Single species; Species; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 1040 data points
    Location Call Number Limitation Availability
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  • 4
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    PANGAEA
    In:  Supplement to: Trimborn, Scarlett; Wolf-Gladrow, Dieter A; Richter, Klaus-Uwe; Rost, Björn (2009): The effect of pCO2 on carbon acquisition and intracellular assimilation in four marine diatoms. Journal of Experimental Marine Biology and Ecology, 376(1), 26-36, https://doi.org/10.1016/j.jembe.2009.05.017
    Publication Date: 2024-03-15
    Description: The effect of pCO2 on carbon acquisition and intracellular assimilation was investigated in the three bloom-forming diatom species, Eucampia zodiacus (Ehrenberg), Skeletonema costatum (Greville) Cleve, Thalassionema nitzschioides (Grunow) Mereschkowsky and the non-bloom-forming Thalassiosira pseudonana (Hust.) Hasle and Heimdal. In vivo activities of carbonic anhydrase (CA), photosynthetic O2 evolution, CO2 and HCO3? uptake rates were measured by membrane-inlet mass spectrometry (MIMS) in cells acclimated to pCO2 levels of 370 and 800 ?atm. To investigate whether the cells operate a C4-like pathway, activities of ribulose-1,5-bisphosphate carboxylase (RubisCO) and phosphoenolpyruvate carboxylase (PEPC) were measured at the mentioned pCO2 levels and a lower pCO2 level of 50 ?atm. In the bloom-forming species, extracellular CA activities strongly increased with decreasing CO2 supply while constantly low activities were obtained for T. pseudonana. Half-saturation concentrations (K1/2) for photosynthetic O2 evolution decreased with decreasing CO2 supply in the two bloom-forming species S. costatum and T. nitzschioides, but not in T. pseudonana and E. zodiacus. With the exception of S. costatum, maximum rates (Vmax) of photosynthesis remained constant in all investigated diatom species. Independent of the pCO2 level, PEPC activities were significantly lower than those for RubisCO, averaging generally less than 3%. All examined diatom species operate highly efficient CCMs under ambient and high pCO2, but differ strongly in the degree of regulation of individual components of the CCM such as Ci uptake kinetics and extracellular CA activities. The present data do not suggest C4 metabolism in the investigated species.
    Keywords: Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Bicarbonate uptake; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated after Freeman & Hayes (1992); Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chromista; EPOCA; Eucampia zoodiacus; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Extracellular carbonic anhydrase activity; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Intracellular carbonic anhydrase activity per chlorophyll a; Isotopic fractionation, during photosynthis; Laboratory experiment; Laboratory strains; Light:Dark cycle; Measured by loss of 18O (Silverman, 1982); Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Ochrophyta; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH meter, WTW, pH 3000; Phytoplankton; Primary production/Photosynthesis; Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas; Radiation, photosynthetically active; Salinity; see reference(s); Single species; Skeletonema costatum; Species; SPP1158; Temperature, water; Thalassionema nitzschioides; Thalassiosira pseudonana
    Type: Dataset
    Format: text/tab-separated-values, 1263 data points
    Location Call Number Limitation Availability
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  • 5
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    Unknown
    PANGAEA
    In:  Supplement to: Kranz, Sven A; Sültemeyer, Dieter; Richter, Klaus-Uwe; Rost, Björn (2009): Carbon acquisition by Trichodesmium: the effect of pCO2 and diurnal changes. Limnology and Oceanography, 54(2), 548-559, https://doi.org/10.4319/lo.2009.54.2.0548
    Publication Date: 2024-03-15
    Description: We investigated carbon acquisition by the N2-fixing cyanobacterium Trichodesmium IMS101 in response to CO2 levels of 15.1, 37.5, and 101.3 Pa (equivalent to 150, 370, and 1000 ppm). In these acclimations, growth rates as well as cellular C and N contents were measured. In vivo activities of carbonic anhydrase (CA), photosynthetic O2 evolution, and CO2 and HCO3- fluxes were measured using membrane inlet mass spectrometry and the 14C disequilibrium technique. While no differences in growth rates were observed, elevated CO2 levels caused higher C and N quotas and stimulated photosynthesis and N2 fixation. Minimal extracellular CA (eCA) activity was observed, indicating a minor role in carbon acquisition. Rates of CO2 uptake were small relative to total inorganic carbon (Ci) fixation, whereas HCO{3 contributed more than 90% and varied only slightly over the light period and between CO2 treatments. The low eCA activity and preference for HCO3- were verified by the 14C disequilibrium technique. Regarding apparent affinities, half-saturation concentrations (K1/2) for photosynthetic O2 evolution and HCO3- uptake changed markedly over the day and with CO2 concentration. Leakage (CO2 efflux : Ci uptake) showed pronounced diurnal changes. Our findings do not support a direct CO2 effect on the carboxylation efficiency of ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) but point to a shift in resource allocation among photosynthesis, carbon acquisition, and N2 fixation under elevated CO2 levels. The observed increase in photosynthesis and N2fixation could have potential biogeochemical implications, as it may stimulate productivity in N-limited oligotrophic regions and thus provide a negative feedback in rising atmospheric CO2 levels.
    Keywords: Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Alkalinity, total, standard deviation; Aragonite saturation state; Bacteria; Based on changes in chla/cells/POC/PON; Bicarbonate ion; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbon/Nitrogen ratio; Carbon/Nitrogen ratio, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Carbon dioxide, total; Conductivity meter (WTW, Weilheim, Gemany); Cyanobacteria; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Growth rate, standard deviation; Laboratory experiment; Laboratory strains; Mass spectrometer ANCA-SL 20-20 Europa Scientific; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate organic carbon, per cell; Particulate organic carbon content per cell, standard deviation; Particulate organic nitrogen per cell; Particulate organic nitrogen per cell, standard deviation; Pelagos; pH; pH, Electrode; pH, standard deviation; Phosphate; Phytoplankton; Radiation, photosynthetically active; Salinity; Single species; Temperature, water; Trichodesmium sp.; Walz 4pi sensor
    Type: Dataset
    Format: text/tab-separated-values, 96 data points
    Location Call Number Limitation Availability
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  • 6
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    Unknown
    ASLO (Association for the Sciences of Limnology and Oceanography)
    In:  Limnology and Oceanography, 51 . pp. 12-20.
    Publication Date: 2018-08-14
    Description: We investigated the carbon acquisition of three marine microalgae, Skeletonema costatum, Phaeocystis globosa, and Emiliania huxleyi in response to different light regimes. Rates of photosynthetic O2 evolution and CO2 and HCO3- uptake were measured by membrane inlet mass spectrometry in cells acclimated to cycles of 16 : 8 light : dark (LD; h : h) and 12 : 12 LD and were compared with those obtained under continuous light. In addition, cellular leakage was estimated for different photoperiods and ambient CO2 concentrations during growth. Maximum rates of photosynthesis more or less doubled under LD cycles compared with continuous light. In S. costatum and E. huxleyi, a remarkably higher contribution of HCO3- to the overall carbon uptake was observed under LD cycles. In contrast, P. globosa did not change its CO2 :HCO3- uptake ratio in response to daylength. Half saturation concentrations (K1/2) for O2 evolution and inorganic carbon (Ci) uptake were also influenced by the photoperiod. Under LD cycles K1/2 values for photosynthesis in S. costatum and P. globosa were similar or higher compared with continuous light, whereas they were much lower in E. huxleyi. With the exception of CO2 uptake in E. huxleyi and P. globosa, affinities for Ci decreased under the LD cycles. Cellular leakage was highest for E. huxleyi and lowest for S. costatum and generally decreased with increasing CO2 concentration. Although this study confirms species specific differences in the CO2-concentrating mechanisms (CCMs), the effect of daylength on CO2 and HCO3- uptake has hitherto not been described. We put forward the idea that variations in light condition influence the cellular carbon demand, thereby imposing a stronger control on CCM regulation than the naturally occurring changes in CO2 supply.
    Type: Article , PeerReviewed
    Format: text
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  • 7
    Publication Date: 2019-07-16
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Format: application/pdf
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  • 8
    Publication Date: 2019-07-16
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
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  • 9
    Publication Date: 2019-07-16
    Description: Recent studies on the diazotrophic cyanobacteria Trichodesmium showed a pronounced CO2 dependency in N2- and C-fixation. However, significant uncertainties remain as to the degree of sensitivity to CO2, modification of these responses by other environmental factors, and the underlying processes. To this end, we investigated carbon acquisition and nitrogen fixation in Trichodesmium IMS101 under different CO2 and light levels. In these acclimations, growth rates, cellular C and N content, and respective isotopic values were measured. In vivo activities of photosynthetic O2 evolution, O2 uptake, CO2 and HCO3- fluxes were obtained using membrane inlet mass spectrometry methods (MIMS). Nitrogen fixation rates were determined using the acetylene reduction assay, and chlorophyll a fluorescence was measured via fluorescence induction and relaxation method (FIRe). Photosynthesis and N2-fixation increased with CO2 and this effect was even more pronounced under high light. Moreover, our data suggest a shift in the distribution of metabolic energy between photosynthesis, carbon acquisition and N2-fixation in Trichodesmium. The observed stimulation in photosynthesis and N2-fixation may enhance the productivity in N-limited oligotrophic regions.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
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  • 10
    Publication Date: 2019-07-16
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
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