Description: The marine CaCO3 cycle is an important component of the oceanic carbon system and directly affects the cycling of natural and the uptake of anthropogenic carbon. In numerical models of the marine carbon cycle, the CaCO3 cycle component is often evaluated against the observed distribution of alkalinity. Alkalinity varies in response to the formation and remineralization of CaCO3 and organic matter. However, it also has a large conservative component, which may strongly be affected by a deficient representation of ocean physics (circulation, evaporation, and precipitation) in models. Here we apply a global ocean biogeochemical model run into preindustrial steady state featuring a number of idealized tracers, explicitly capturing the model's CaCO3 dissolution, organic matter remineralization, and various preformed properties (alkalinity, oxygen, phosphate). We compare the suitability of a variety of measures related to the CaCO3 cycle, including alkalinity (TA), potential alkalinity and TA*, the latter being a measure of the time-integrated imprint of CaCO3 dissolution in the ocean. TA* can be diagnosed from any data set of TA, temperature, salinity, oxygen and phosphate. We demonstrate the sensitivity of total and potential alkalinity to the differences in model and ocean physics, which disqualifies them as accurate measures of biogeochemical processes. We show that an explicit treatment of preformed alkalinity (TA0) is necessary and possible. In our model simulations we implement explicit model tracers of TA0 and TA*. We find that the difference between modelled true TA* and diagnosed TA* was below 10% (25%) in 73% (81%) of the ocean's volume. In the Pacific (and Indian) Oceans the RMSE of A* is below 3 (4) mmol TA m−3, even when using a global rather than regional algorithms to estimate preformed alkalinity. Errors in the Atlantic Ocean are significantly larger and potential improvements of TA0 estimation are discussed. Applying the TA* approach to the output of three state-of-the-art ocean carbon cycle models, we demonstrate the advantage of explicitly taking preformed alkalinity into account for separating the effects of biogeochemical processes and circulation on the distribution of alkalinity. In particular, we suggest to use the TA* approach for CaCO3 cycle model evaluation.

Description: The ocean's nitrogen budget has escaped quantification. A modelling study shows how a small shift in the nitrate-to-phosphate uptake ratio of phytoplankton has a large effect on calculated nitrogen fixation rates.

Description: The Beta Triangle, a region of the oligotrophic subtropical eastern North Atlantic Ocean, is notorious for its enigmatic oxygen, carbon, and nitrogen balances, in which nutrient supply is said to explain only a fraction of production necessary for estimated carbon export. Rates of dissolved organic carbon accumulation and dissolved organic nitrogen utilization in surface water and an assessment of oxygen utilized, organic matter consumed, and nitrate and phosphate regenerated in subsurface water, show that conventional production estimates miss substantial shares of biotic production. The shallow export of total organic carbon, predominantly dissolved (DOC), by subduction is responsible for about 50–70% of apparent oxygen utilization in subsurface water between the base of the surface layer at ca. 140 m and ca. 195 m depth, but it is insignificant below. Additionally, there is an estimated accumulation of 1.0 to 1.75 mol DOC m−2 a−1 in surface water. Including DOC dynamics in its carbon balance reveals the surface of this ultra-oligotrophic part of the ocean to be net autotrophic. Increasing subsurface values of excess nitrogen (DINxs) imply the export of nitrogen from surface water stemming from production not exclusively fuelled by new nitrate supplied from below. Total organic nitrogen (almost exclusively dissolved, DON) is consumed in the surface layer at a rate estimated at 0.13 to 0.23 mol m−2 a−1. There is no variation in dissolved organic phosphorus (DOP) in the same direction. DON utilization thus contributes to the pronounced subsurface DINxs signature. DOC export and accumulation are important in the carbon balance in surface and near-surface water. DON utilization and, probably, N2 fixation contribute significant amounts to the nitrogen supply of surface water. These processes can close part of the enigmatic carbon and nitrogen balances in the Beta Triangle. There are, however, no comparable processes which can explain the equally enigmatic situation concerning phosphorus supply in this area.

Description: The conversion of fixed nitrogen to N2 in suboxic waters is estimated to contribute roughly a third to total oceanic losses of fixed nitrogen and is hence understood to be of major importance to global oceanic production and, therefore, to the role of the ocean as a sink of atmospheric CO2. At present heterotrophic denitrification and autotrophic anammox are considered the dominant sinks of fixed nitrogen. Recently, it has been suggested that the trophic nature of pelagic N2-production may have additional, "collateral" effects on the carbon cycle, where heterotrophic denitrification provides a shallow source of CO2 and autotrophic anammox a shallow sink. Here, we analyse the stoichiometries of nitrogen and associated carbon conversions in marine oxygen minimum zones (OMZ) focusing on heterotrophic denitrification, autotrophic anammox, and dissimilatory nitrate reduction to nitrite and ammonium in order to test this hypothesis quantitatively. For open ocean OMZs the combined effects of these processes turn out to be clearly heterotrophic, even with high shares of the autotrophic anammox reaction in total N2-production and including various combinations of dissimilatory processes which provide the substrates to anammox. In such systems, the degree of heterotrophy (ΔCO2:ΔN2), varying between 1.7 and 6, is a function of the efficiency of nitrogen conversion. On the contrary, in systems like the Black Sea, where suboxic N-conversions are supported by diffusive fluxes of NH4+ originating from neighbouring waters with sulphate reduction, much lower values of ΔCO2:ΔN2 can be found. However, accounting for concomitant diffusive fluxes of CO2, ratios approach higher values similar to those computed for open ocean OMZs. Based on our analysis, we question the significance of collateral effects concerning the trophic nature of suboxic N-conversions on the marine carbon cycle.