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  • 1
    Publication Date: 2022-05-25
    Description: Author Posting. © The Author(s), 2014. This is the author's version of the work. It is posted here by permission of Nature Publishing Group for personal use, not for redistribution. The definitive version was published in Nature Communications 5 (2014): 3192, doi:10.1038/ncomms4192.
    Description: Deep-sea hydrothermal vents are a significant source of oceanic iron. Although hydrothermal iron rapidly precipitates as inorganic minerals upon mixing with seawater, it can be stabilized by organic matter and dispersed more widely than previously recognized. The nature and source of this organic matter is unknown. Here we show that microbial genes involved in cellular iron uptake are highly expressed in the Guaymas Basin deep-sea hydrothermal plume. The nature of these microbial iron transporters, taken together with the low concentration of dissolved iron and abundance of particulate iron in the plume, indicates that iron minerals are the target for this microbial scavenging and uptake. Our findings indicate that cellular iron uptake is a major process in plume microbial communities and suggest new mechanisms for generating Fe-C complexes. This “microbial iron pump” could represent an important mode of converting hydrothermal iron into bioavailable forms that can be dispersed through the oceans.
    Description: This project is funded by the Gordon and Betty Moore Foundation through grant GBMF 2609 to GJD/JAB/BMT and by the National Science Foundation through grants OCE 1029242 to GJD, and R2K grant OCE1038055 to JAB/BMT. We thank the University of Michigan Rackham Graduate School Faculty Research Fellowship Program for their support.
    Description: 2014-08-05
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
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  • 2
    Publication Date: 2022-05-25
    Description: Author Posting. © The Oceanography Society, 2012. This article is posted here by permission of The Oceanography Society for personal use, not for redistribution. The definitive version was published in Oceanography 25, no. 1 (2012): 209–212, doi:10.5670/oceanog.2012.19.
    Description: The global mid-ocean ridge (MOR) system is a 60,000 km submarine volcanic mountain range that crosses all of the major ocean basins on Earth. Along the MOR, subseafloor seawater circulation exchanges heat and elements between the oceanic crust and seawater. One of the elements released through this venting process is iron. The amount of iron released by hydrothermal venting to the ocean per year (called a flux) is similar in magnitude to that in global riverine runoff (Elderfield and Schultz, 1996). Until recently, measurements and modeling activities to understand the contribution of hydrothermal iron to the ocean budget have been largely neglected. It was thought that hydrothermal iron was removed completely from seawater by precipitation of iron-bearing minerals within plumes and then deposited at the seafloor close to vent sites. With this assumption in place, the contribution of hydrothermal fluxes to the ocean budget was considered negligible. Recent work, however, questions the validity of that assumption, and leads to what we call the "leaky vent" hypothesis. Our goal is to measure the forms of iron, known as speciation, present in hydrothermal plume particles to better understand the bioavailability, geochemical reactivity, and transport properties of hydrothermal iron in the ocean.
    Description: We thank the Woods Hole Oceanographic Institution Deep Ocean Exploration Institute, the National Science Foundation Ridge 2000 Program, and the Gordon and Betty Moore Foundation for funding.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 3
    Publication Date: 2022-05-25
    Description: © International Society for Microbial Ecology, 2011. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in The ISME Journal 5 (2011): 1748–1758, doi:10.1038/ismej.2011.48.
    Description: A novel hydrothermal field has been discovered at the base of Lōihi Seamount, Hawaii, at 5000 mbsl. Geochemical analyses demonstrate that ‘FeMO Deep’, while only 0.2 °C above ambient seawater temperature, derives from a distal, ultra-diffuse hydrothermal source. FeMO Deep is expressed as regional seafloor seepage of gelatinous iron- and silica-rich deposits, pooling between and over basalt pillows, in places over a meter thick. The system is capped by mm to cm thick hydrothermally derived iron-oxyhydroxide- and manganese-oxide-layered crusts. We use molecular analyses (16S rDNA-based) of extant communities combined with fluorescent in situ hybridizations to demonstrate that FeMO Deep deposits contain living iron-oxidizing Zetaproteobacteria related to the recently isolated strain Mariprofundus ferroxydans. Bioenergetic calculations, based on in-situ electrochemical measurements and cell counts, indicate that reactions between iron and oxygen are important in supporting chemosynthesis in the mats, which we infer forms a trophic base of the mat ecosystem. We suggest that the biogenic FeMO Deep hydrothermal deposit represents a modern analog for one class of geological iron deposits known as ‘umbers’ (for example, Troodos ophilolites, Cyprus) because of striking similarities in size, setting and internal structures.
    Description: Funding has been provided by the NSF Microbial Observatories Program (KJE, DE, BT, HS and CM), by the Gordon and Betty Moore Foundation (KJE), the College of Letters, Arts, and Sciences at the University of Southern California (KJE) and by the NASA Astrobiology Institute (KJE, DE).
    Keywords: Geomicrobiology ; Deep biosphere ; Hydrothermal ; Iron bacteria ; Iron oxidation
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 4
    Publication Date: 2022-05-25
    Description: Author Posting. © The Oceanography Society, 2012. This article is posted here by permission of The Oceanography Society for personal use, not for redistribution. The definitive version was published in Oceanography 25, no. 1 (2012): 196–208, doi:10.5670/oceanog.2012.18.
    Description: Hydrothermal vents are among the most biologically active regions of the deep ocean. However, our understanding of the limits of life in this extreme environment, the extent of biogeochemical transformation that occurs in the crust and overlying ocean, and the impact of vent life on regional and global ocean chemistry is in its infancy. Recently, scientific studies have expanded our view of how vent microbes gain metabolic energy at vents through their use of dissolved chemicals and minerals contained in ocean basalts, seafloor sulfide deposits, and hydrothermal plumes and, in turn, how they catalyze chemical and mineral transformations. The scale of vent environments and the difficulties inherent in the study of life above, on, and below the deep seafloor have led to the development of geochemical and bioenergetic models. These models predict habitability and biological activity based on the chemical composition of hydrothermal fluids, seawater, and the surrounding rock, balanced by the physiological energy demand of cells. This modeling, coupled with field sampling for ground truth and discovery, has led to a better understanding of how hydrothermal vents affect the ocean and global geochemical cycles, and how they influence our views of life on the early Earth and the search for life beyond our own planet.
    Description: Research for this paper was supported by the National Science Foundation (NSF) Division of Ocean Sciences grants 0732611 for JFH, 0926805 and 1038055 for JAB, and 1038055 for BMT; and by the University of Missouri Research Board for KLR.
    Repository Name: Woods Hole Open Access Server
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  • 5
    Publication Date: 2022-05-25
    Description: Author Posting. © The Author(s), 2018. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Marine Chemistry 201 (2018): 183-197, doi:10.1016/j.marchem.2018.01.011.
    Description: Iron (Fe)-poor surface waters limit phytoplankton growth and their ability to remove carbon (C) from the atmosphere and surface ocean. Over the past few decades, research has focused on constraining the global Fe cycle and its impacts on the global C cycle. Hydrothermal vents have become a highly debated potential source of Fe to the surface ocean. Two main mechanisms for transport of Fe over long distances have been proposed: Fe-bearing nanoparticles and organic C complexation with Fe in the dissolved (dFe) and particulate (pFe) pools. However, the ubiquity and importance of these processes is unknown at present, and very few vents have been investigated for Fe-Corg interactions or the transport of such materials away from the vent. Here we describe the near-field contributions (first ~100 km from ridge) of pFe and Corg to the Southern East Pacific Rise (SEPR) plume, one of the largest known hydrothermal plume features in the global ocean. Plume particles (〉 0.2 μm) were collected as part of the U.S. GEOTRACES Eastern Pacific Zonal Transect cruise (GP16) by in-situ filtration. Sediment cores were also collected to investigate the properties of settling particles. In this study, X-ray absorption near edge structure (XANES) spectroscopy was used in two complementary X-ray synchrotron approaches, scanning transmission X-ray microscopy (STXM) and X-ray microprobe, to investigate the Fe and C speciation of particles within the near-field non-buoyant SEPR plume. When used in concert, STXM and X-ray microprobe provide fine-scale and representative information on particle morphology, elemental co-location, and chemical speciation. Bulk chemistry depth profiles for particulate Corg (POC), particulate manganese (pMn), and pFe indicated that the source of these materials to the non-buoyant plume is hydrothermal in origin. The plume particles at stations within the first ~100 km down-stream of the ridge were composites of mineral (oxidized Fe) and biological materials (organic C, Corg). Iron chemistry in the plume and in the core-top suspended sediment fluff layer were both dominated by Fe(III) phases, such as Fe(III) oxyhydroxides and Fe(III) phyllosilicates. Particulate sulfur (pS) was a rare component of our plume and sediment samples. When pS was detected, it was in the form of an Fe sulfide mineral phase, composing ≤ 0.4% of the Fe on a per atom basis. The resuspended sediment fluff layer contained a mixture of inorganic (coccolith fragments) and Corg bearing (lipid-rich biofilm-like) materials. The particle morphology and co-location of C and Fe in the sediment was different from that in plume particles. This indicates that if the Fe-Corg composite particles settle rapidly to the sediments, then they experience strong alteration during settling and/or within the sediments. Overall, our observations indicate that the particles within the first ~ 100 km of the laterally advected plume are S-depleted, Fe(III)-Corg composites indicative of a chemically oxidizing plume with strong biological modification. These findings confirm that the Fe-Corg relationships observed for non-buoyant plume particles within ~ 100 m of the vent site are representative of particles within this region of the non-buoyant plume (~100 km). These findings also point to dynamic alteration of Fe-Corg bearing particles during transport and settling. The specific biogeochemical processes at play, and the implications for nutrient cycling in the ocean are currently unknown and represent an area of future investigation.
    Keywords: Scanning transmission X-ray microscopy (STXM) ; X-ray absorption near edge structure (XANES) spectroscopy ; X-ray microprobe ; GEOTRACES GP16 ; Eastern Pacific Zonal Transect
    Repository Name: Woods Hole Open Access Server
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  • 6
    Publication Date: 2022-09-22
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in German, C., Blackman, D., Fisher, A., Girguis, P., Hand, K., Hoehler, T., Huber, J., Marshall, J., Pietro, K., Seewald, J., Shock, E., Sotin, C., Thurnherr, A., & Toner, B. Ocean system science to inform the exploration of ocean worlds. Oceanography, 35(1), (2022): 16-20, https://doi.org/10.5670/oceanog.2021.411.
    Description: Ocean worlds provide fascinating opportunities for future ocean research. They allow us to test our understanding of processes we consider fundamental to Earth’s ocean and simultaneously provide motivation to explore our ocean further and develop new technologies to do so. In parallel, ocean worlds research offers opportunities for ocean scientists to provide meaningful contributions to novel investigations in the coming decades that will search for life beyond Earth. Key to the contributions that oceanographers can make to this field is that studies of all other ocean worlds remain extremely data limited. Here, we describe an approach based on ocean systems science in which theoretical modeling can be used, in concert with targeted laboratory experimentation and direct observations in Earth’s ocean, to predict what processes (including those essential to support life) might be occurring on other ocean worlds. In turn, such an approach would help identify new technologies that might be required for future space missions as well as appropriate analog studies that could be conducted on Earth to develop and validate such technologies. Our approach is both integrative and interdisciplinary and considers multiple domains, from processes active in the subseafloor to those associated with ocean-ice feedbacks.
    Description: This work is supported by NASA Astrobiology Program award # 80NSSC19K1427 Exploring Ocean Worlds: Ocean System Science to Support the Search for Life.
    Repository Name: Woods Hole Open Access Server
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  • 7
    Publication Date: 2022-05-26
    Description: Author Posting. © The Author(s), 2014. This is the author's version of the work. It is posted here by permission of AAAS for personal use, not for redistribution. The definitive version was published in Science 344 (2014): 757-760, doi:10.1126/science.1252229.
    Description: Viruses are the most abundant biological entities in the oceans and a pervasive cause of mortality of microorganisms that drive biogeochemical cycles. Although the ecological and evolutionary impacts of viruses on marine phototrophs are well-recognized, little is known about their impact on ubiquitous marine lithotrophs. Here we report 18 genome sequences of double-stranded DNA viruses that putatively infect widespread sulfur-oxidizing bacteria. Fifteen of these viral genomes contain auxiliary metabolic genes for the alpha and gamma subunits of reverse dissimilatory sulfite reductase (rdsr). This enzyme oxidizes elemental sulfur, which is abundant in the hydrothermal plumes studied here. Our findings implicate viruses as a key agent in the sulfur cycle and as a reservoir of genetic diversity for bacterial enzymes that underpin chemosynthesis in the deep oceans.
    Description: This project is funded in part by the Gordon and Betty Moore Foundation Grant GBMF2609 and National Science Foundation Grant OCE1038006.
    Repository Name: Woods Hole Open Access Server
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  • 8
    Publication Date: 2022-05-26
    Description: Author Posting. © The Author(s), 2017. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Nature Geoscience 10 (2017): 195-201, doi:10.1038/ngeo2900.
    Description: Hydrothermally-sourced dissolved metals have been recorded in all ocean basins. In the oceans’ largest known hydrothermal plume, extending westward across the Pacific from the Southern East Pacific Rise, dissolved iron and manganese were shown by the GEOTRACES program to be transported halfway across the Pacific. Here, we report that particulate iron and manganese in the same plume also exceed background concentrations, even 4000 km from the source. Both dissolved and particulate iron deepen by more than 350 m relative to 3He – a non-reactive tracer of hydrothermal input – crossing isopycnals. Manganese shows no similar descent. Individual plume particle analyses indicate that particulate iron occurs within low-density organic matrices, consistent with its slow sinking rate of 5-10 m year-1. Chemical speciation and isotopic composition analyses reveal that particulate iron consists of Fe(III) oxyhydroxides, while dissolved iron consists of nanoparticulate Fe(III) oxyhydroxides and an organically-complexed iron phase. The descent of plume dissolved iron is best explained by reversible exchange onto slowly sinking particles, likely mediated by organic compounds binding iron. We suggest that in ocean regimes with high particulate iron loadings, dissolved iron fluxes may depend on the balance between stabilization in the dissolved phase and the reversibility of exchange onto sinking particles.
    Description: This work was funded by the National Science Foundation (OCE-1234827 to R.M.S. and C.R.G., OCE-1235248 to C.R.G., OCE-1232986 to B.M.T., and OCE-1649435 and OCE-1649439 to S.G.J.).
    Repository Name: Woods Hole Open Access Server
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