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  • 1
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    Unknown
    PANGAEA
    In:  Supplement to: Cárdenas, Paco; Vacelet, Jean; Chevaldonné, Pierre; Pérez, Thierry; Xavier, Joana R (2018): From marine caves to the deep sea, a new look at Caminella (Demospongiae, Geodiidae) in the Atlanto-Mediterranean region. Zootaxa, 4466(1), 174, https://doi.org/10.11646/zootaxa.4466.1.14
    Publication Date: 2023-03-10
    Description: Caminella Lendenfeld, 1894 is a poorly known Geodiidae genus with unclear phylogenetic relationships. In order to find new lines of evidence that could shed light on the evolutionary history of Caminella, we decided to revise type material and museum material, as well as examine new material from underwater caves and deep-sea ecosystems. In doing so, we formally show that Isops maculosus Vosmaer, 1894 and Caminella loricata Lendenfeld, 1894 are junior synonyms of Caminella intuta (Topsent, 1892). We discuss different spicule morphological phenotypes in C. intuta, which may be linked to silica availability. We also discovered two new species of deep-sea Caminella: 1) from Cape Verde (Caminella caboverdensis sp. nov.) and 2) from seamounts located south of the Azores archipelago and the North of Spain (Caminella pustula sp. nov.). We reveal that Caminella sterrasters have complex surface microstructures, unique amongst the Geodiidae, where actin tips are linked to each other. Molecular markers (COI, 28S (C1-D2) and 18S) sequenced for some specimens led to new phylogenetic analyses, which continue to suggest a close relationship of Caminella with the Erylinae and Calthropella; these affinities are discussed in light of morphological characters.
    Keywords: Accession number, genetics; Adriatic Sea; Alboran-Is_reconstr; Alboran-Is_st3; Alboran Sea; Alboran-Sea_BV41; Area/locality; Banc-Atlantis_DW265; Banc-Hyeres_DW184; Banc-Plato_DW248; Bay of Biscay; BIO; Biology; Canarias Sea; Cape-Verde_st6-174; Cap-Ferrat-dAil; Cap-lAbeille_reconst; Chak-El-Hatab; Collection; Comment; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; DEPTH, water; Dugi-Otok-Is_Y-Cave; Eastern Basin; El-Cachucho-Bank_DR9; Grand-Banc-Meteor_CP151; Grotte-Cosquer_reconstr; Grotte-de-Bear_reconstr; Grotte-de-Gameau_reconstr; Grotte-des-Tremies_reconstr; Grotte-du-Figuier_reconstr; Grotte-Fauconniere_reconstr; Gruta-do-Carreiro-Maldito_reconstr; Gulf-of-Naples_reconstr; Habitat; Hvar_reconstr; LATITUDE; Le-Petit-Conglue_reconstr; LONGITUDE; Name; Reference/source; Sagres_reconstr; Sampling date; South Atlantic Ocean; Species; SponGES; Station label; Strazica_Velebit-Ch; Tirreno Sea; Tremiti-Is_reconstr; Type; Western Basin
    Type: Dataset
    Format: text/tab-separated-values, 197 data points
    Location Call Number Limitation Availability
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  • 2
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    PANGAEA
    In:  Supplement to: Savriama, Yoland; Stige, Leif Christian; Gerber, Sylvain; Pérez, Thierry; Alibert, Paul; David, Bruno (2015): Impact of sewage pollution on two species of sea urchins in the Mediterranean Sea (Cortiou, France): Radial asymmetry as a bioindicator of stress. Ecological Indicators, 54, 39-47, https://doi.org/10.1016/j.ecolind.2015.02.004
    Publication Date: 2023-01-13
    Description: The surroundings of the Cortiou sewage are among the most polluted environments of the French Mediterranean Sea (Marseilles, France). So far, no studies have precisely quantified the impact of pollution on the development of organisms in this area.Methods: We used a fluctuating asymmetry (FA) measure of developmental instability (DI) to assess environmental stress in two species of radially symmetric sea urchins (Arbacia lixula and Paracentrotus lividus). For six sampling sites (Cortiou, Riou, Maire, East Maire, Mejean, and Niolon), levels of FA were calculated from continuous and discrete skeletal measures of ambulacral length, number of pore pairs and primary tubercles.Results: For both species, the most polluted sampling site, Cortiou, displayed the highest level of FA, while the Maire and East Maire sampling sites displayed the lowest levels. A. lixula revealed systematic differences in FA among sampling sites for all characters and P. lividus showed differences in FA for the number of primary tubercles.Conclusions: Statistical analyses of FA show a concordance between the spatial patterns of FA among sampling sites and the spatial distribution of sewage discharge pollutants in the Cortiou area. High developmental stress in these sampling sites is associated with exposure to high concentrations of heavy metals and many harmful organic substances contained in wastewater. FA estimated from structures with complex symmetry appears to be a fast and reliable tool to detect subtle differences in FA. Its use in biomonitoring programs for inferring anthropogenic and natural environmental stress is suggested.
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2023-02-12
    Keywords: Ambulacral length; Cortiou; DEPTH, sediment/rock; East_Maire; Elevation of event; Event label; Individual code; Latitude of event; Longitude of event; Maire; Mejean; Niolon; Repeat; Riou; Side; Species
    Type: Dataset
    Format: text/tab-separated-values, 27939 data points
    Location Call Number Limitation Availability
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  • 4
    Publication Date: 2023-02-12
    Keywords: Cortiou; DEPTH, sediment/rock; East_Maire; Elevation of event; Event label; Individual code; Latitude of event; Longitude of event; Maire; Mejean; Niolon; Number of pores; Repeat; Riou; Side; Species
    Type: Dataset
    Format: text/tab-separated-values, 27694 data points
    Location Call Number Limitation Availability
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  • 5
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    PANGAEA
    In:  Aix-Marseille University, CNRS, IRD and Avignon University
    Publication Date: 2024-04-20
    Description: Sponges are benthic animals that live attached to the ocean bottom and feed by filtering seawater. In the Mediterranean Sea there are many species, some of which have been harvested during centuries for commercialization. These horny sponges were harvested using techniques that varied in time and space. Sponge production in the Mediterranean Sea peaked at the end of the 19th century, and a second time, after the Second World War, when approximately 300 tons were produced per year. In recent years, Mediterranean sponge production has declined to barely a few tons per year. The objective of the SACOLEVE program (Spatial and temporal Adaptation of a traditional Mediterranean fishery facing Regional Change: COmbining history and ecoLogy to study past, prEsent and future of sponge HarVEsting) was to (i) obtain a full picture of the sponge production decrease and (ii) understand the underlying reasons explaining the temporal sponge production variations. In the frame of this program, a PhD thesis entitled "Histoire de la pêche des éponges en Méditerranée, et son adaptation récente au changement régional" (Mediterranean sponge fishing history and its recent adaptation to regional change) was dedicated to this research topic. Information from numerous archives, grey literature, published articles and fishermen interviews were collected and stored in an original Access 2013 database. This tool answered the needs of labelling, sorting, homogenizing and cross-referencing large quantities of historical information on sponge fishing in the Mediterranean. Data, mainly from the Mediterranean countries, span the period from the 18th century to 2019. They concern geographic distribution of commercial sponge populations, commercial yearly movements (production, export, import) of sponges, and detailed sponge fishing efforts for the main sponge-producing countries and smaller sponge fishing communities. The data submitted here represent a partial extraction of the database used for the PhD thesis.
    Keywords: adaptation; AMU; Binary Object; Binary Object (File Size); Binary Object (Media Type); Biodivmex; CNRS; commercial sponges; environmental changes; File name; IMBE; IRD; Mediterranean_Sea; Mediterranean Sea; OT-Med; SACOLEVE; small-scale fishery; TELEMME
    Type: Dataset
    Format: text/tab-separated-values, 14 data points
    Location Call Number Limitation Availability
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  • 6
    Publication Date: 2016-05-25
    Description: Marine sponges are well known for their associations with highly diverse, yet very specific and often highly similar microbiota. The aim of this study was to identify potential bacterial sub-populations in relation to sponge phylogeny and sampling sites and to define the core bacterial community. 16S ribosomal RNA gene amplicon pyrosequencing was applied to 32 sponge species from eight locations around the world's oceans, thereby generating 2567 operational taxonomic units (OTUs at the 97% sequence similarity level) in total and up to 364 different OTUs per sponge species. The taxonomic richness detected in this study comprised 25 bacterial phyla with Proteobacteria, Chloroflexi and Poribacteria being most diverse in sponges. Among these phyla were nine candidate phyla, six of them found for the first time in sponges. Similarity comparison of bacterial communities revealed no correlation with host phylogeny but a tropical sub-population in that tropical sponges have more similar bacterial communities to each other than to subtropical sponges. A minimal core bacterial community consisting of very few OTUs (97%, 95% and 90%) was found. These microbes have a global distribution and are probably acquired via environmental transmission. In contrast, a large species-specific bacterial community was detected, which is represented by OTUs present in only a single sponge species. The species-specific bacterial community is probably mainly vertically transmitted. It is proposed that different sponges contain different bacterial species, however, these bacteria are still closely related to each other explaining the observed similarity of bacterial communities in sponges in this and previous studies. This global analysis represents the most comprehensive study of bacterial symbionts in sponges to date and provides novel insights into the complex structure of these unique associations.
    Type: Article , PeerReviewed
    Format: text
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  • 7
    Publication Date: 2017-05-28
    Description: Initial seedling recruitment is one of the most critical stages for plants in the Mediterranean basin. Moreover, wildfires and post-fire environmental conditions might deteriorate regeneration success, which can lead to problems for sustainable forest restoration and forest persistence. On this context, different seed origins and pine species may be better adapted to new environmental conditions remaining after forest fires and seed protection might modulate seedling initial recruitment. This study evaluates the effects of seed origin (Pinus nigra Arn. subsp. salzmannii Dunal (Franco) from lowland, midland and upland distribution areas), pine species (Pinus pinaster Aiton, Pinus sylvestris L. and Pinus nigra Arn. subsp. salzmannii Dunal (Franco)) and seed protection on seed emergence and early seedling survival after forest fires in the Cuenca Mountains. In addition, a greenhouse experiment was set up under controlled conditions to test seedling performance and to compare initial seedling growth of different P. nigra seed origins growing in field and greenhouse conditions. Results showed that wetter spring seasons and P. nigra seed origins from midland and upland distribution growing in their natural habitat distribution perform better that P. sylvestris and P. pinaster. Seed protection is an important factor modulating the above-mentioned trend. P. nigra seeds growing at the greenhouse experiment showed differences in growth for extreme (upland or lowland) P. nigra distribution.
    Electronic ISSN: 1999-4907
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Published by MDPI Publishing
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