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  • 1
    Publication Date: 2014-04-22
    Description: Ocean acidification is considered a major threat to marine ecosystems and may particularly affect calcifying organisms such as corals, foraminifera and coccolithophores. Here we investigate the impact of elevated pCO2 and lowered pH on growth and calcification in the common calcareous dinoflagellate Thoracosphaera heimii. We observe a substantial reduction in growth rate, calcification and cyst stability of T. heimii under elevated pCO2. Furthermore, transcriptomic analyses reveal CO2 sensitive regulation of many genes, particularly those being associated to inorganic carbon acquisition and calcification. Stable carbon isotope fractionation for organic carbon production increased with increasing pCO2 whereas it decreased for calcification, which suggests interdependence between both processes. We also found a strong effect of pCO2 on the stable oxygen isotopic composition of calcite, in line with earlier observations concerning another T. heimii strain. The observed changes in stable oxygen and carbon isotope composition of T. heimii cysts may provide an ideal tool for reconstructing past seawater carbonate chemistry, and ultimately past pCO2. Although the function of calcification in T. heimii remains unresolved, this trait likely plays an important role in the ecological and evolutionary success of this species. Acting on calcification as well as growth, ocean acidification may therefore impose a great threat for T. heimii.
    Type: Article , PeerReviewed
    Format: text
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  • 2
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    PANGAEA
    In:  Supplement to: Van de Waal, Dedmer B; John, Uwe; Ziveri, Patrizia; Reichart, Gert-Jan; Hoins, Mirja; Sluijs, Appy; Rost, Björn (2013): Ocean Acidification Reduces Growth and Calcification in a Marine Dinoflagellate. PLoS ONE, 8(6), e65987, https://doi.org/10.1371/journal.pone.0065987
    Publication Date: 2023-08-03
    Description: Ocean acidification is considered a major threat to marine ecosystems and may particularly affect calcifying organisms such as corals, foraminifera and coccolithophores. Here we investigate the impact of elevated pCO2 and lowered pH on growth and calcification in the common calcareous dinoflagellate Thoracosphaera heimii. We observe a substantial reduction in growth rate, calcification and cyst stability of T. heimii under elevated pCO2. Furthermore, transcriptomic analyses reveal CO2 sensitive regulation of many genes, particularly those being associated to inorganic carbon acquisition and calcification. Stable carbon isotope fractionation for organic carbon production increased with increasing pCO2 whereas it decreased for calcification, which suggests interdependence between both processes. We also found a strong effect of pCO2 on the stable oxygen isotopic composition of calcite, in line with earlier observations concerning another T. heimii strain. The observed changes in stable oxygen and carbon isotope composition of T. heimii cysts may provide an ideal tool for reconstructing past seawater carbonate chemistry, and ultimately past pCO2. Although the function of calcification in T. heimii remains unresolved, this trait likely plays an important role in the ecological and evolutionary success of this species. Acting on calcification as well as growth, ocean acidification may therefore impose a great threat for T. heimii.
    Keywords: Calculated; Carbon, inorganic, particulate, per cell; Carbon, organic, particulate, per cell; Carbon dioxide; Cysts; Fractionation of calcite; Fractionation of organic carbon; Growth rate; Mediterranean Sea Acidification in a Changing Climate; MedSeA; Ratio; Treatment; δ18O, calcite; δ18O, dissolved inorganic carbon
    Type: Dataset
    Format: text/tab-separated-values, 144 data points
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  • 3
    Publication Date: 2023-11-08
    Keywords: 672; Age; AGE; Center for Marine Environmental Sciences; Fertilizer; GeoB10706-3; Gulf of Taranto; MARUM; MUC; MultiCorer; POS339; Poseidon; River discharge; Temperature, in rock/sediment
    Type: Dataset
    Format: text/tab-separated-values, 259 data points
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  • 4
    Publication Date: 2023-11-08
    Keywords: 675; Bitectatodinium tepikiense; Brigantedinium spp.; Calculated; Center for Marine Environmental Sciences; Counting, dinoflagellate cysts; Density; DEPTH, sediment/rock; Dinoflagellate cyst indeterminata; Dinoflagellate cyst per unit mass; Dinoflagellate cyst reworked; Dry mass; Echinidinium granulatum; Echinidinium spp.; Echinidinium transparantum; Echinidinium zonneveldiae; GeoB10709-5; Gulf of Taranto; Impagidinium aculeatum; Impagidinium paradoxum; Impagidinium patulum; Impagidinium sphaericum; Impagidinium strialatum; Lejeunecysta invisitautm; Lejeunecysta oliva; Lejeunecysta sabrina; Lingulodinium machaerophorum; MARUM; MUC; MultiCorer; Nematosphaeropsis labyrinthus; Operculodinium centrocarpum; Operculodinium israelianum; Operculodinium spp.; Pentapharsodinium dalei; Polykrikos kofoidii; Polykrikos schwarzii; Polysphaeridium zoharyi; POS339; Poseidon; Quinquecuspis concreta; Sedimentation rate per year; Selenopemphix nephroides; Selenopemphix quanta; Spiniferites elongatus; Spiniferites mirabilis; Spiniferites ramosus; Spiniferites spp.; Stelladinium stellatum; Trinovantedinium applanatum; Votadinium calvum; Xandarodinium xanthum
    Type: Dataset
    Format: text/tab-separated-values, 3160 data points
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  • 5
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    PANGAEA
    In:  Supplement to: Zonneveld, Karin A F; Chen, Liang; Elshanawany, Rehab; Fischer, Helmut W; Hoins, Mirja; Ibrahim, Mohammed I; Pittauerova, Daniela; Versteegh, Gerard J M (2012): The use of dinoflagellate cysts to seperate human-induced from natural variability in the trophic state of the Po River discharge plume over the last two centuries. Marine Pollution Bulletin, 64(1), 114-132, https://doi.org/10.1016/j.marpolbul.2011.10.012
    Publication Date: 2023-11-08
    Description: To obtain insight into the natural and/or human-induced changes in the trophic state of the distal portion of the Po River discharge plume over the last two centuries, high temporal resolution dinoflagellate cyst records were established at three sites. Cyst production rates appear to reflect the natural variability in the river's discharge, whereas cyst associations reflect the trophic state of the upper waters, which in turn can be related to agricultural development. The increased abundances of Lingulodinium machaerophorum and Stelladinium stellatum found as early as 1890 and 1920 correspond to the beginning of the industrial revolution in Italy and the first chemical production and dispersion of ammonia throughout Europe. After 1955, the increased abundances of these species and of Polykrikos schwartzii, Brigantedinium spp. and Pentapharsodinium dalei correspond to agriculturally induced alterations of the hypertrophic conditions. A slight improvement in water quality can be observed from 1987 onward.
    Keywords: 672; 675; 701; Center for Marine Environmental Sciences; Gargano Promontory; GeoB10706-3; GeoB10709-5; GeoB10732-3; Gulf of Taranto; MARUM; MUC; MultiCorer; POS339; Poseidon
    Type: Dataset
    Format: application/zip, 4 datasets
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  • 6
    Publication Date: 2023-11-28
    Keywords: 701; Ataxiodinium choane; Bitectatodinium spongium; Bitectatodinium tepikiense; Brigantedinium spp.; Center for Marine Environmental Sciences; Concentricystes; Counting, dinoflagellate cysts; Density, dry bulk; DEPTH, sediment/rock; Echinidinium spp.; Gargano Promontory; GeoB10732-3; Impagidinium aculeatum; Impagidinium paradoxum; Impagidinium patulum; Impagidinium plicatum; Impagidinium sphaericum; Impagidinium spp.; Impagidinium strialatum; Impagidinium variaseptum; Impagidinium velorum; Lejeunecysta oliva; Leujeunocysta sabrina; Lingulodinium machaerophorum; MARUM; Mass; MUC; MultiCorer; Nematosphaeropsis labyrinthus; Operculodinium centrocarpum; Operculodinium israelianum; Pentapharsodinium dalei; Polykrikos kofoidii; Polykrikos schwarzii; Polysphaeridium zoharyi; POS339; Poseidon; Quinquecuspis concreta; Reworked; Selenopemphix nephroides; Selenopemphix quanta; Spiniferites bentori; Spiniferites bulloideus; Spiniferites elongatus; Spiniferites membranaceus; Spiniferites mirabilis; Spiniferites pachydermus; Spiniferites ramosus; Spiniferites spp.; Stelladinium stellatum; Trinovantedinium applanatum; Votadinium calvum; Votadinium spinosum; Xandarodinium xanthum
    Type: Dataset
    Format: text/tab-separated-values, 1628 data points
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  • 7
    Publication Date: 2023-11-28
    Keywords: 672; Ataxiodinium choane; Bitectatodinium spongium; Bitectatodinium tepikiense; Brigantedinium spp.; Carbon, organic, total; Center for Marine Environmental Sciences; Counting, dinoflagellate cysts; Density, dry bulk; DEPTH, sediment/rock; Echinidinium spp.; Element analyser CS, LECO CS-200; GeoB10706-3; Gulf of Taranto; Gymnodinium catenatum; Impagidinium aculeatum; Impagidinium paradoxum; Impagidinium patulum; Impagidinium plicatum; Impagidinium sphaericum; Impagidinium strialatum; Islandinium minutum; Leipokatium invisitatum; Lejeunecysta oliva; Lejeunecysta sabrina; Lingulodinium machaerophorum; MARUM; Mass; MUC; MultiCorer; Nematosphaeropsis labyrinthus; Operculodinium centrocarpum; Operculodinium israelianum; Pentapharsodinium dalei; Polykrikos schwarzii; POS339; Poseidon; Protoperidinium americanum; Pyxidinopsis reticulata; Quinquecuspis concreta; Selenopemphix nephroides; Selenopemphix quanta; Spiniferites bentori; Spiniferites mirabilis; Spiniferites ramosus; Spiniferites spp.; Stelladinium stellatum; Tectatodinium pellitum; Trinovantedinium applanatum; Tuberculodinium vancampoae; Votadinium calvum; Xandarodinium xanthum
    Type: Dataset
    Format: text/tab-separated-values, 1840 data points
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  • 8
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    PANGAEA
    In:  Supplement to: Hoins, Mirja; Eberlein, Tim; Großmann, Christian H; Brandenburg, Karen; Reichart, Gert-Jan; Rost, Björn; Sluijs, Appy; Van de Waal, Dedmer B (2016): Combined effects of ocean acidification and light or nitrogen availabilities on 13C fractionation in marine dinoflagellates. PLoS ONE, 11(5), e0154370, https://doi.org/10.1371/journal.pone.0154370
    Publication Date: 2024-03-15
    Description: Along with increasing oceanic CO2 concentrations, enhanced stratification constrains phytoplankton to shallower upper mixed layers with altered light regimes and nutrient concentrations. Here, we investigate the effects of elevated pCO2 in combination with light or nitrogen-limitation on 13C fractionation (epsilon p) in four dinoflagellate species. We cultured Gonyaulax spinifera and Protoceratium reticulatum in dilute batches under low-light (LL) and high-light (HL) conditions, and grew Alexandrium fundyense and Scrippsiella trochoidea in nitrogen-limited continuous cultures (LN) and nitrogen-replete batches (HN). The observed CO2-dependency of epsilon p remained unaffected by the availability of light for both G. spinifera and P. reticulatum, though at HL epsilon p was consistently lower by about 2.7 per mil over the tested CO2 range for P. reticulatum. This may reflect increased uptake of (13C-enriched) bicarbonate fueled by increased ATP production under HL conditions. The observed CO2-dependency of epsilon p disappeared under LN conditions in both A. fundyense and S. trochoidea. The generally higher epsilon p under LN may be associated with lower organic carbon production rates and/or higher ATP:NADPH ratios. CO2-dependent epsilon p under non-limiting conditions has been observed in several dinoflagellate species, showing potential for a new CO2-proxy. Our results however demonstrate that light- and nitrogen-limitation also affect epsilon p, thereby illustrating the need to carefully consider prevailing environmental conditions.
    Keywords: Alexandrium fundyense; Alkalinity, total; Alkalinity, total, standard deviation; Aragonite saturation state; Bicarbonate ion; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbon, organic, particulate, per cell; Carbon, organic, particulate, standard deviation; Carbon, organic, particulate/Nitrogen, organic, particulate ratio; Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Chlorophyll a, standard deviation; Chlorophyll a per cell; Chromista; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gonyaulax spinifera; Growth/Morphology; Growth rate; Growth rate, standard deviation; Isotopic fractionation, during photosynthis; Isotopic fractionation, during photosynthis, standard deviation; Laboratory experiment; Laboratory strains; Light; Macro-nutrients; Myzozoa; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Phytoplankton; Potentiometric; Potentiometric titration; Primary production/Photosynthesis; Protoceratium reticulatum; Registration number of species; Salinity; Scrippsiella trochoidea; Single species; Species; Temperature, water; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 1008 data points
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  • 9
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    PANGAEA
    In:  Supplement to: Van de Waal, Dedmer B; John, Uwe; Ziveri, Patrizia; Reichart, Gert-Jan; Hoins, Mirja; Sluijs, Appy; Rost, Björn (2013): Ocean Acidification Reduces Growth and Calcification in a Marine Dinoflagellate. PLoS ONE, 8(6), e65987, https://doi.org/10.1371/journal.pone.0065987
    Publication Date: 2024-05-27
    Description: Ocean acidification is considered a major threat to marine ecosystems and may particularly affect calcifying organisms such as corals, foraminifera and coccolithophores. Here we investigate the impact of elevated pCO2 and lowered pH on growth and calcification in the common calcareous dinoflagellate Thoracosphaera heimii. We observe a substantial reduction in growth rate, calcification and cyst stability of T. heimii under elevated pCO2. Furthermore, transcriptomic analyses reveal CO2 sensitive regulation of many genes, particularly those being associated to inorganic carbon acquisition and calcification. Stable carbon isotope fractionation for organic carbon production increased with increasing pCO2 whereas it decreased for calcification, which suggests interdependence between both processes. We also found a strong effect of pCO2 on the stable oxygen isotopic composition of calcite, in line with earlier observations concerning another T. heimii strain. The observed changes in stable oxygen and carbon isotope composition of T. heimii cysts may provide an ideal tool for reconstructing past seawater carbonate chemistry, and ultimately past pCO2. Although the function of calcification in T. heimii remains unresolved, this trait likely plays an important role in the ecological and evolutionary success of this species. Acting on calcification as well as growth, ocean acidification may therefore impose a great threat for T. heimii.
    Keywords: Abundance per volume; Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calculated; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, particulate, production per cell; Carbon, organic, particulate, production per cell; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Category; Chromista; Cysts; Fractionation of calcite; Fractionation of organic carbon; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gene expression; Growth/Morphology; Growth rate; Identification; Incubation duration; Laboratory experiment; Laboratory strains; Mediterranean Sea Acidification in a Changing Climate; MedSeA; Myzozoa; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at equilibrator temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate inorganic carbon/particulate organic carbon ratio; Pelagos; pH; Phytoplankton; Potentiometric; Potentiometric titration; Protein name; Replicates; Salinity; Single species; Species; Temperature, water; Thoracosphaera heimii; Treatment; δ18O, calcite; δ18O, dissolved inorganic carbon
    Type: Dataset
    Format: text/tab-separated-values, 8222 data points
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  • 10
    Publication Date: 2018-05-24
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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