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  • 1
    Publication Date: 2019-01-22
    Description: Bathymodiolus mussels live in symbiosis with intracellular sulfur-oxidizing (SOX) bacteria that provide them with nutrition. We sequenced the SOX symbiont genomes from two Bathymodiolus species. Comparison of these symbiont genomes with those of their closest relatives revealed that the symbionts have undergone genome rearrangements, and up to 35% of their genes may have been acquired by horizontal gene transfer. Many of the genes specific to the symbionts were homologs of virulence genes. We discovered an abundant and diverse array of genes similar to insecticidal toxins of nematode and aphid symbionts, and toxins of pathogens such as Yersinia and Vibrio. Transcriptomics and proteomics revealed that the SOX symbionts express the toxin-related genes (TRGs) in their hosts. We hypothesize that the symbionts use these TRGs in beneficial interactions with their host, including protection against parasites. This would explain why a mutualistic symbiont would contain such a remarkable 'arsenal' of TRGs
    Type: Article , PeerReviewed
    Format: text
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2024-02-02
    Description: The discovery of deep-sea hydrothermal vents in 1977 revolutionized our understanding of the energy sources that fuel primary productivity on Earth. Hydrothermal vent ecosystems are dominated by animals that live in symbiosis with chemosynthetic bacteria. So far, only two energy sources have been shown to power chemosynthetic symbioses: reduced sulphur compounds and methane. Using metagenome sequencing, single-gene fluorescence in situ hybridization, immunohistochemistry, shipboard incubations and in situ mass spectrometry, we show here that the symbionts of the hydrothermal vent mussel Bathymodiolus from the Mid-Atlantic Ridge use hydrogen to power primary production. In addition, we show that the symbionts of Bathymodiolus mussels from Pacific vents have hupL, the key gene for hydrogen oxidation. Furthermore, the symbionts of other vent animals such as the tubeworm Riftia pachyptila and the shrimp Rimicaris exoculata also have hupL. We propose that the ability to use hydrogen as an energy source is widespread in hydrothermal vent symbioses, particularly at sites where hydrogen is abundant.
    Keywords: Comment; DERIDGE; Event label; From Mantle to Ocean: Energy-, Material- and Life-cycles at Spreading Axes; Hydrogen; Hydrogen concentration; Hydrogen consumption rate; Hydrogen consumption rate per weight; M68/1; M68/1-20-ROV; M68/1-24-ROV; M68/1-39-ROV; M68/1-70-ROV; MARSUED3; Meteor (1986); Remote operated vehicle; ROV; Sample ID; Time in minutes; Tissue piece, number of; Wet mass
    Type: Dataset
    Format: text/tab-separated-values, 1582 data points
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2024-04-13
    Description: The discovery of deep-sea hydrothermal vents in 1977 revolutionized our understanding of the energy sources that fuel primary productivity on Earth. Hydrothermal vent ecosystems are dominated by animals that live in symbiosis with chemosynthetic bacteria. So far, only two energy sources have been shown to power chemosynthetic symbioses: reduced sulphur compounds and methane. Using metagenome sequencing, single-gene fluorescence in situ hybridization, immunohistochemistry, shipboard incubations and in situ mass spectrometry, we show here that the symbionts of the hydrothermal vent mussel Bathymodiolus from the Mid-Atlantic Ridge use hydrogen to power primary production. In addition, we show that the symbionts of Bathymodiolus mussels from Pacific vents have hupL, the key gene for hydrogen oxidation. Furthermore, the symbionts of other vent animals such as the tubeworm Riftia pachyptila and the shrimp Rimicaris exoculata also have hupL. We propose that the ability to use hydrogen as an energy source is widespread in hydrothermal vent symbioses, particularly at sites where hydrogen is abundant.
    Keywords: Comment; DERIDGE; Event label; From Mantle to Ocean: Energy-, Material- and Life-cycles at Spreading Axes; Hydrogen; Hydrogen concentration; Hydrogen consumption rate; Hydrogen consumption rate per weight; HYDROMAR2; M64/2; M64/2-244-ROV; M64/2-263-ROV; M64/2-266-ROV; M64/2-281-ROV; Meteor (1986); Mid-Atlantic Ridge at 10-15°N; Remote operated vehicle; ROV; Sample ID; Time in minutes; Wet mass
    Type: Dataset
    Format: text/tab-separated-values, 986 data points
    Location Call Number Limitation Availability
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  • 4
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    PANGAEA
    In:  Supplement to: Petersen, Jillian M; Zielinski, Frank U; Pape, Thomas; Seifert, Richard; Moraru, Cristina; Amann, Rudolf; Hourdez, Stéphane; Girguis, Peter R; Wankel, Scott D; Barbe, Valerie; Pelletier, Eric; Fink, Dennis; Borowski, Christian; Bach, Wolfgang; Dubilier, Nicole (2011): Hydrogen is an energy source for hydrothermal vent symbioses. Nature, 476, 176-180, https://doi.org/10.1038/nature10325
    Publication Date: 2024-04-13
    Description: The discovery of deep-sea hydrothermal vents in 1977 revolutionized our understanding of the energy sources that fuel primary productivity on Earth. Hydrothermal vent ecosystems are dominated by animals that live in symbiosis with chemosynthetic bacteria. So far, only two energy sources have been shown to power chemosynthetic symbioses: reduced sulphur compounds and methane. Using metagenome sequencing, single-gene fluorescence in situ hybridization, immunohistochemistry, shipboard incubations and in situ mass spectrometry, we show here that the symbionts of the hydrothermal vent mussel Bathymodiolus from the Mid-Atlantic Ridge use hydrogen to power primary production. In addition, we show that the symbionts of Bathymodiolus mussels from Pacific vents have hupL, the key gene for hydrogen oxidation. Furthermore, the symbionts of other vent animals such as the tubeworm Riftia pachyptila and the shrimp Rimicaris exoculata also have hupL. We propose that the ability to use hydrogen as an energy source is widespread in hydrothermal vent symbioses, particularly at sites where hydrogen is abundant.
    Keywords: DERIDGE; From Mantle to Ocean: Energy-, Material- and Life-cycles at Spreading Axes; HYDROMAR2; M64/2; M64/2-244-ROV; M64/2-263-ROV; M64/2-266-ROV; M64/2-281-ROV; M68/1; M68/1-20-ROV; M68/1-24-ROV; M68/1-39-ROV; M68/1-70-ROV; MARSUED3; Meteor (1986); Mid-Atlantic Ridge at 10-15°N; Remote operated vehicle; ROV
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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