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  • 1
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] The physiology and biochemistry of many taxa inhabiting deep-sea hydrothermal vents have been elucidated; however, the physicochemical factors controlling the distribution of these organisms at a given vent site remain an enigma after 20 years of research. The chemical speciation of ...
    Type of Medium: Electronic Resource
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  • 2
    Publication Date: 2019-07-17
    Description: Recent applications of molecular genetics to edaphic microbial communities of the McMurdo Dry Valleys and elsewhere have rejected a long-held belief that Antarctic soils contain extremely limited microbial diversity. The Inter-Valley Soil Comparative Survey (IVSCS) aims to elucidate the factors shaping these unique microbial communities and their biogeography by integrating molecular genetic approaches with biogeochemical analyses. Although the microbial communities of Dry Valley soils may be complex, there is little doubt that the ecosystem’s food web is relatively simple, and evidence suggests that physicochemical conditions may play the dominant role in shaping microbial communities. To examine this hypothesis, bacterial communities from representative soil samples collected in four geographically disparate Dry Valleys were analyzed using molecular genetic tools, including pyrosequencing of 16S rRNA gene PCR amplicons. Results show that the four communities are structurally and phylogenetically distinct, and possess significantly different levels of diversity. Strikingly, only 2 of 214 phylotypes were found in all four valleys, challenging a widespread assumption that the microbiota of the Dry Valleys is composed of a few cosmopolitan species. Analysis of soil geochemical properties indicated that salt content, alongside altitude and [Cu2+], was significantly correlated with differences in microbial communities. Our results indicate that the microbial ecology of Dry Valley soils is highly localized and that physicochemical factors potentially play major roles in shaping the microbiology of ice-free areas of Antarctica. These findings hint at links between Dry Valley glacial geomorphology and microbial ecology, and raise previously unrecognized issues related to environmental management of this unique ecosystem.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 3
    Publication Date: 2020-02-06
    Description: Our growing awareness of the microbial world’s importance and diversity contrasts starkly with our limited understanding of its fundamental structure. Despite recent advances in DNA sequencing, a lack of standardized protocols and common analytical frameworks impedes comparisons among studies, hindering the development of global inferences about microbial life on Earth. Here we present a meta-analysis of microbial community samples collected by hundreds of researchers for the Earth Microbiome Project. Coordinated protocols and new analytical methods, particularly the use of exact sequences instead of clustered operational taxonomic units, enable bacterial and archaeal ribosomal RNA gene sequences to be followed across multiple studies and allow us to explore patterns of diversity at an unprecedented scale. The result is both a reference database giving global context to DNA sequence data and a framework for incorporating data from future studies, fostering increasingly complete characterization of Earth’s microbial diversity.
    Type: Article , PeerReviewed
    Format: text
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  • 4
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    Inter Research
    In:  Marine Ecology Progress Series, 94 . pp. 35-41.
    Publication Date: 2015-08-31
    Description: Chemoautotrophic bacteria live symbiotically in gills of Lucinoma aequizonata, an infaunal clam inhabiting an oxygen-poor environment. These intracellular symbionts respire nitrate, i.e. they use nitrate instead of oxygen as a terminal electron acceptor in the respiratory chain. Nitrate is only reduced to nitrite and not further to nitrogen gas. Nitrate is respired by the symbionts under fully aerobic conditions at the same rate as under anaerobic conditions. The bacterial symbionts contain a nitrate reductase that is associated with the membrane-containing fraction of the symbiont cell and that is sensitive to respiratory inhibitors; both features are consistent with the respiratory role of this enzyme. A review of nitrate reductase in chemoautotrophic syrnbionts suggests that nitrate respiration may be common among these symbioses. Symbiont nitrate reductase may be an ecologically important factor permitting the survival of animal hosts in oxygen-poor environments.
    Type: Article , PeerReviewed
    Format: text
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