In:
Frontiers in Genetics, Frontiers Media SA, Vol. 12 ( 2021-6-11)
Abstract:
N6-methyladenosine (m 6 A) RNA modification is vital for cancers because methylation can alter gene expression and even affect some functional modification. Our study aimed to analyze m 6 A RNA methylation regulators and m 6 A-related genes to understand the prognosis of early lung adenocarcinoma. Methods The relevant datasets were utilized to analyze 21 m 6 A RNA methylation regulators and 5,486 m 6 A-related genes in m 6 Avar. Univariate Cox regression analysis, random survival forest analysis, Kaplan–Meier analysis, Chi-square analysis, and multivariate cox analysis were carried out on the datasets, and a risk prognostic model based on three feature genes was constructed. Results Respectively, we treated GSE31210 ( n = 226) as the training set, GSE50081 ( n = 128) and TCGA data ( n = 400) as the test set. By performing univariable cox regression analysis and random survival forest algorithm in the training group, 218 genes were significant and three prognosis-related genes ( ZCRB1 , ADH1C , and YTHDC2 ) were screened out, which could divide LUAD patients into low and high-risk group ( P & lt; 0.0001). The predictive efficacy of the model was confirmed in the test group GSE50081 ( P = 0.0018) and the TCGA datasets ( P = 0.014). Multivariable cox manifested that the three-gene signature was an independent risk factor in LUAD. Furthermore, genes in the signature were also externally validated using the online database. Moreover, YTHDC2 was the important gene in the risk score model and played a vital role in readers of m 6 A methylation. Conclusion The findings of this study suggested that associated with m 6 A RNA methylation regulators and m 6 A-related genes, the three-gene signature was a reliable prognostic indicator for LUAD patients, indicating a clinical application prospect to serve as a potential therapeutic target.
Type of Medium:
Online Resource
ISSN:
1664-8021
DOI:
10.3389/fgene.2021.656114
DOI:
10.3389/fgene.2021.656114.s001
DOI:
10.3389/fgene.2021.656114.s002
DOI:
10.3389/fgene.2021.656114.s003
DOI:
10.3389/fgene.2021.656114.s004
DOI:
10.3389/fgene.2021.656114.s005
Language:
Unknown
Publisher:
Frontiers Media SA
Publication Date:
2021
detail.hit.zdb_id:
2606823-0
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