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  • 1
    In: Blood, American Society of Hematology, Vol. 124, No. 21 ( 2014-12-06), p. 4533-4533
    Abstract: Musashi 2 (also known as MSI2), a mRNA binding protein is reported to control critical stem cell fate decisions by binding to the 3’untranslated region of target mRNAs, thereby inhibiting translation. MSI2 is preferentially expressed in hematopoietic tissue, in particular early myeloid progenitors. Moreover, investigators suggest upregulated MSI2 disrupts regulatory pathway/s leading to hematopoietic stem cell proliferation, impaired myeloid differentiation and worse clinical prognosis in CML and AML (Kharas et al. Nat Med. 2010; 16:903; Ito et al. Nature. 2010; 466:765). Indeed we have confirmed increased MSI2 levels in CML patients in blast crisis (BC) compared with those in chronic phase (CP), irrespective of lymphoid or myeloid transformation. Furthermore, we have shown MSI2 and BCR-ABL1 expressions correlate. Here we report data implying MSI2 functions viaTGFβ1 signalling pathway. We retrospectively studied 54 CML cDNA samples from 34 patients (M:15 ; F:19) in CP with median age 55.5 years (range 12-74). Apart from 3 patients treated with interferon+AraC, the remainder were prescribed Imatinib mesylate. Of the 54 samples 29 were collected at diagnosis (Dx) and 25 were obtained at 3 months post therapy (3M). For 20 of the patients, samples collected at Dx and 3M were available. Eight of the patients failed to achieve major molecular response (MMR) within 12 months post therapy. In addition to patient samples we included 19 normal cDNA controls from healthy blood donors (M:10 ; F:9), with 41 years median age (range 20-61). We also included 20 cDNA samples derived from hematopoietic cell lines (lymphoma: 7; AML: 3; CML:6 ; essential thrombocythemia: 1 ; hyperesoinophilic syndrome: 1 ; Acute lymphoblastic leukemia: 1). The cDNA was synthesized using reverse transcriptase and random hexamers. All the samples were subjected to quantitative real time PCR using TaqMan assay to quantify MSI2, TGFRβ1 and GUSβmRNA levels. Furthermore, we subjected protein isolated from the cells lines to Western blot analysis to assess TGFβR1 expression. MSI2 mRNA median levels in patient samples were significantly decreased compared with the NC group at Dx and at 3M, p=0.002 and p=0.013, respectively. But we found no significant difference in MSI2 mRNA levels at Dx nor at 3M, between those who achieved major molecular response and those who did not within 12 months of starting therapy, p=0.215 and p=1.871, respectively. Also we observed no significant difference between the patient samples and the NC group TGFβR1 transcript numbers at Dx nor at 3M, p=0.057 and p=0.097, respectively. Equally we observed no significant difference in TGFβR1 levels, either at Dx or 3M, between those who did and failed to achieve MMR. But we found strong to moderate correlation between MSI2 and TGFβR1 expression when we compared the Dx and 3M data as determined by Spearman correlation coefficient, r=0.6975 and 0.5715, respectively. More importantly, we observed 9 of the cell lines, with increased ( 〉 6.7%) or detectable MSI2 mRNA expression, of which 6 express BCR-ABL1 (BV173, Lama87, K562, KCL22, KU812 and SupB15), the TGFβR1 protein was considerably decreased. The BCR-ABL1 positive cell line Meg01 was the one exception with increased MSI2 mRNA levels (7.1%) and clearly detectable TGFβR1 protein. Conversely, of the 10 BCR-ABL1 negative cell lines with decreased or undetectable MSI2 transcripts the TGFβR1 protein was clearly detectable in 8. Of these 7 were lymphoid cell lines (L-248, KM-H2, L-1236, HDLM-2, BJAB, U-266, U-2932) and one was essential thrombocythemia, SET2. The 2 exceptions were AML cell lines OCI-AML-2 and OCI-AML-3 with considerably decreased MSI2mRNA levels and markedly decreased TGFβR1 protein expression. We suggest MSI2 expression is significantly decreased in CML patients in CP because the early progenitors expressing it are masked by large bulk of mature myeloid cells in these patients. Therefore to assess the prognostic value of MSI2 levels at diagnosis it should be quantified in CD34+ enriched samples at diagnosis. More importantly, finding cell lines expressing MSI2, with the exception of 3 cell lines (OCI-AML-2, OCI-AML-3 and Meg01) had decreased TGFβR1 protein is consistent with its role as a post transcription regulator. These findings combined with the previous data showing MSI2 mRNA levels are increased in CML BC support the notion that it functions via TGFβR1 signaling pathway to influence CML transformation. Disclosures le Coutre: Novartis: Honoraria.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2014
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  • 2
    In: Blood, American Society of Hematology, Vol. 112, No. 11 ( 2008-11-16), p. 4261-4261
    Abstract: Background. Point mutations in the kinase domain (KD) of the BCR-ABL are the most frequent mechanism of drug resistance in CML patients treated with kinase inhibitors (TKI). More than 80 mutations with different frequency and clinical significance have been reported. One of them, the T315I confers resistance to all TKIs available. The detection of mutations in KD allows early identification of high-risk patients and therefore guides clinical therapy decisions. Aim. To assess the mutation status of a group of CML pts resistant to TKI from Uruguay (n=35) and Brazil (n=30). Methods. KD mutation screening was performed by RT-PCR and direct sequencing according to Branford et al. (2002). Additionally, we developed a rapid, specific, sensitive and low cost allele specific (AS)-RT-PCR assay to identify T315I, using Branford’s KD amplification primers in combination with an allele specific primer for the T315I point mutation detection. BCR-ABL transcript levels were also measured by RQ-PCR according to international recommendations. Results and Discussion. RT-PCR and direct sequencing analyses performed in all pts showed the presence of T315l mutation in 3/65 cases. Other 11 showed the alternative mutations Y253H (n=2), E450A, G250E (n=2), E459K (n=2), E450G, F317L (n=2) and E255K; and the remaining 55 showed no mutations in the ABL KD. All 65 samples together with cDNA from 15 non-resistant CML pts and 10 cDNA from non-CML were analyzed by AS-RT-PCR assay for T315l mutation in order to validate the method. T315l was identified in the 3 samples in which the mutation was previously detected by direct sequencing and in 1 pt that had been classified as KD mutation negative. This result was then confirmed by direct sequencing of the AS-PCR product. T315 was neither detected in samples positive for other mutations nor in samples of non-resistant CML and non-CML patients, supporting the specificity of the method. Assessment of the sensitivity of the AS-RT-PCR was performed on serial dilutions experiments using RNA from T315 positive pt into RNA from CML-T315l negative pt, showing that the T315I mutation was detectable to a level of 0.01 % by AS-PCR, while through direct sequencing method the sensitivity was 10–20%. The prevalence of mutations in our study was 15/65 (23%). Conclusions. Our results showed that the AS-RT-PCR described here is a convenient and easy tool to be used in a clinical routine laboratory for rapid screening for BCR-ABL T315. This, together with direct sequencing, constitutes a suitable approach for CML resistance monitoring and therapeutic choice.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2008
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  • 3
    In: Blood, American Society of Hematology, Vol. 124, No. 21 ( 2014-12-06), p. 1868-1868
    Abstract: Musashi 2 (also known as MSI2), a mRNA binding protein, is reported to control critical stem cell fate decisions by binding to the 3’untranslated region of target mRNAs, thereby inhibiting translation. MSI2 is preferentially expressed in hematopoietic tissue and in particular in early myeloid progenitors. Furthermore, investigators have shown MSI2 expression is upregulated by HOXA9 resulting in dysfunction of the regulatory pathway, leading to hematopoietic stem cell proliferation, impaired myeloid differentiation and is associated with worse prognosis in chronic myeloid leukemia (CML) and acute myeloid leukemia (Kharas, et al. Nat Med 2010; 16:903; Ito, et al. Nature 2010; 466:765). We verified MSI2 levels are significantly increased in CML patients in blast crisis compared with those in chronic phase, irrespective of lymphoid or myeloid transformation (Kaeda, et al. Blood. 2011;118;supplement). Given these observations we sought to assess MSI2 and HOXA9 expression in BCR-ABL1negative myeloproliferative neoplasm (MPN) patients. We retrospectively quantified MSI2 and HOXA9 expression in 38 samples of which 22 were from highly heterogeneous MPN patients, all of whom are alive. These 22 MPN patients were classified as polycythemia vera (PV) n= 5; essential thrombocythemia (ET) n=3; primary myelofibrosis (PMF) n=11 and unclassified MPN (U-MPN) n=3, based on clinical hematologic and molecular parameters in accordance with the World Health Organization 2008 classification. The MPN patients demographic features were (M: 13; F:9) with median age of 69.5 years (range 53-88). Of the 22 patients 17 had the V617F allele, in one it was undetectable and 4 were not tested. The remaining cDNA samples were unselected normal controls (NC) from healthy blood donors (M: 6; F:10) with median age of 41 years (range 34-61). MSI2 and HOXA9 mRNA levels were quantified by quantitative real time PCR (Q-PCR) and normalized to GUSβendogenous control gene, expression levels. Patient and control data were subjected to Mann-Whitney unpaired test two-tailed anaylsis using Graphpad Prism version 6.04 software. MSI2 and HOXA9 expression was detectable in all the samples by Q-PCR. However, HOXA9 transcript numbers, median 0.115% (range 0.020-2.360) were significantly increased (p=0.0123) in MPN patients when compared with the NC Group, median 0.060% (range 0.030-0.120). Conversely, median MSI2 expression level 0.715% (range 0.370-2.030) in MPN patients, was significantly decreased, p 〈 0.0001 compared to that observed in the NC Group, median 2.817% (range 1.445-7.533). But both MSI2 and HOXA9 were significantly increased, p 〈 0.0001, when comparing NC Group (n=16) with the PMF patients (n=11). Of these 11 PMF patients 6 had the V617F allele, in one it was undetectable and 4 were not screened. Interestingly, we noted a difference between PV and PMF data with respect to HOXA9 and MSI2 expression. Specifically, the PMF patients’ HOXA9 median [n=11; median age 62 years (range 53-81)], 0.790% (range 0.03-2.36); was significantly higher, (p=0.0021), than the PV patients’ [n=5; median age 77 years (range 69-88)] , 0.030% (range 0.10-0.40). By contrast no significant difference, p=0.0504, was detected when comparing MSI2expression between patients with PV and PMF. The sample size was too small to reliably evaluate the other MPN groups. Our data are consistent with the notion that MSI2 plays a significant role in the biology of myeloid malignancies. While PV and ET patient numbers in this study were too small for evaluation, we did note finding increased HOXA9 expression among PMF subjects is consistent with reports that up to 30% of PMF patients harbor ASXL1 mutations, which are reported to lead to increased HOXA9 expression. Furthermore, the ASXL1 mutations are associated with worse prognosis, such that stem cell transplant (SCT) is recommended for patients harboring these mutations. In this study 2 of the 11 PMF patients had SCT and were among three patients with the highest HOXA9 levels determined. Given the findings it would be interesting to screen the PMF patients for ASXL1 mutations. Equally, finding MSI2 and HOXA9 increased expression in PMF patients is supportive of the later regulating the former. However, we observed no correlation between MSI2 and HOXA9 levels. An expanded study is required to assess these preliminary data implying HOXA9 expression is a prognostic marker in PMF patients. Disclosures le Coutre: Novartis: Honoraria.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2014
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    detail.hit.zdb_id: 80069-7
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  • 4
    In: Journal of Clinical Oncology, American Society of Clinical Oncology (ASCO), Vol. 26, No. 18 ( 2008-06-20), p. 3085-3087
    Type of Medium: Online Resource
    ISSN: 0732-183X , 1527-7755
    RVK:
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    Language: English
    Publisher: American Society of Clinical Oncology (ASCO)
    Publication Date: 2008
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  • 5
    In: Stem Cell Research, Elsevier BV, Vol. 24 ( 2017-10), p. 16-20
    Type of Medium: Online Resource
    ISSN: 1873-5061
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2017
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  • 6
    In: Clinical Lymphoma Myeloma and Leukemia, Elsevier BV, Vol. 16 ( 2016-09), p. S16-
    Type of Medium: Online Resource
    ISSN: 2152-2650
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2016
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    detail.hit.zdb_id: 2193618-3
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  • 7
    In: Hematology, Transfusion and Cell Therapy, Elsevier BV, Vol. 42, No. 3 ( 2020-07), p. 261-268
    Type of Medium: Online Resource
    ISSN: 2531-1379
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2020
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  • 8
    Online Resource
    Online Resource
    American Association for Cancer Research (AACR) ; 2014
    In:  Molecular Cancer Research Vol. 12, No. 12_Supplement ( 2014-12-01), p. A58-A58
    In: Molecular Cancer Research, American Association for Cancer Research (AACR), Vol. 12, No. 12_Supplement ( 2014-12-01), p. A58-A58
    Abstract: Personalised medicine is an evolving field that seeks to target cancer therapies based on unique genetic characteristics of the tumour and/or the patient. One of the most significant advances towards personalised care in the field of oncology was the establishment of KRAS gene mutation as a validated biomarker predicting efficacy in epidermal growth factor receptor (EGFR) targeted therapies in the treatment of metastatic colorectal cancer (mCRC). KRAS mutations are frequently found in CRC indicating the importance of its genotyping in the study of the molecular mechanisms behind this disease. Although major advances have occurred over the past decade, there are still important gaps in our understanding of CRC carcinogenesis, particularly whether sex-linked factors play any role. Therefore, in this study the profile of KRAS mutations in the Brazilian population was analysed by conducting direct sequencing of KRAS codons 12 and 13 belonging to 8,234 metastatic CRC patient samples from different Brazilian regions. The median age was 59 years and the overall percentage of wild-type and mutated KRAS was 66.4% and 33.6%, respectively. Interestingly, a significant difference in the percentage of mutated KRAS patients was observed between male and female (32.5% versus 34.8%, p=0.03). However, there were no differences in the distribution of any specific KRAS mutation according to gender. This is one of the largest cohorts of KRAS genotyping in CRC patients indicating a higher incidence of KRAS mutations in females compared to males. Citation Format: Veronica Aran, Fernando M. Vieira, Ana Paula Victorino, Jonas H. Salem, Ilana Zalcberg-Renault, Martin H. Bonamino, Mariano Zalis, Carlos Gil Ferreira. KRAS mutations: Variable incidences in a Brazilian cohort of 8,234 metastatic colorectal cancer patients. [abstract]. In: Proceedings of the AACR Special Conference on RAS Oncogenes: From Biology to Therapy; Feb 24-27, 2014; Lake Buena Vista, FL. Philadelphia (PA): AACR; Mol Cancer Res 2014;12(12 Suppl):Abstract nr A58. doi: 10.1158/1557-3125.RASONC14-A58
    Type of Medium: Online Resource
    ISSN: 1541-7786 , 1557-3125
    Language: English
    Publisher: American Association for Cancer Research (AACR)
    Publication Date: 2014
    detail.hit.zdb_id: 2097884-4
    SSG: 12
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  • 9
    In: Neuro-Oncology, Oxford University Press (OUP), Vol. 22, No. Supplement_3 ( 2020-12-04), p. iii430-iii431
    Abstract: Surgery consists in the mainstay of treatment in most gliomas, but in many cases, a resection is not feasible. Liquid biopsy is an ideal tool providing a minimally invasive method through plasma or CSF sampling to assess cell-free tumor DNA (ctDNA). Here we explore the feasibility of detecting DNA in plasma exosomes (exoDNA) extracted from glioma patients and further investigate its use in identifying molecular alterations. Exosomes were isolated from 2ml of plasma from 24 patients (13 LGG, 8 HGG, 3 DIPG) and fully characterized by nanoparticle tracking analysis and transmission electron microscopy. DNA was extracted from 13 samples (exoDNA) so far. Five patients had confirmed point mutations in the primary tumor (3BRAFV600E; 1FGFR1N546K; 1H3.3), additionally, 3 samples were collected from clinically diagnosed DIPG patients to inquire H3K27M mutations. DNA was extracted successfully from all exosome samples; a pre-amplification step was needed and direct sequencing was carried out for BRAFV600E. FGFR1N546K and H3K27M mutations were sought in patients with positive tumors. Wildtype BRAF fragment was identified in 12/13samples (1 patient failed sequencing). However, none of the five tumor positive patients nor the DIPG patients had mutations detected at the exo-DNA level. There is growing evidence that CSF may be the ideal source of ctDNA in brain tumor patients, therefore although we could not detect mutations in plasma DNA we are currently analyzing CSF exoDNA and cell-free DNA to evaluate if this proves a successful strategy and weather exoDNA is more representative of the tumor content.
    Type of Medium: Online Resource
    ISSN: 1522-8517 , 1523-5866
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 2020
    detail.hit.zdb_id: 2094060-9
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  • 10
    Online Resource
    Online Resource
    Elsevier BV ; 2015
    In:  Neuroimaging Clinics of North America Vol. 25, No. 1 ( 2015-02), p. 97-103
    In: Neuroimaging Clinics of North America, Elsevier BV, Vol. 25, No. 1 ( 2015-02), p. 97-103
    Type of Medium: Online Resource
    ISSN: 1052-5149
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2015
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