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  • 1
    Online Resource
    Online Resource
    Wiley ; 2015
    In:  Journal of the Association for Information Science and Technology Vol. 66, No. 1 ( 2015-01), p. 201-212
    In: Journal of the Association for Information Science and Technology, Wiley, Vol. 66, No. 1 ( 2015-01), p. 201-212
    Abstract: Previous studies of international scientific collaboration have rarely gone beyond revealing the structural relationships between countries. Considering how scientific collaboration is actually initiated, this study focuses on the organization and sector levels of international coauthorship networks, going beyond a country‐level description. Based on a network analysis of coauthorship networks between members of the O rganisation for E conomic C ooperation and D evelopment ( OECD ), this study attempts to gain a better understanding of international scientific collaboration by exploring the structure of the coauthorship network in terms of university‐industry‐government ( UIG ) relationships, the mode of knowledge production, and the underlying dynamic of collaboration in terms of geographic, linguistic, and economic factors. The results suggest that the U nited S tates showed overwhelming dominance in all bilateral UIG combinations with the exception of the government‐government ( GG ) network. Scientific collaboration within the industry sector was concentrated in a few players, whereas that between the university and industry sectors was relatively less concentrated. Despite the growing participation from other sectors, universities were still the main locus of knowledge production, with the exception of 5 countries. The university sector in English‐speaking wealthy countries and the government sector of non–English‐speaking, less‐wealthy countries played a key role in international collaborations between OECD countries. The findings did not provide evidence supporting the institutional proximity argument.
    Type of Medium: Online Resource
    ISSN: 2330-1635 , 2330-1643
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2015
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  • 2
    Online Resource
    Online Resource
    Oxford University Press (OUP) ; 2018
    In:  Journal of Computer-Mediated Communication Vol. 23, No. 5 ( 2018-09-01), p. 260-277
    In: Journal of Computer-Mediated Communication, Oxford University Press (OUP), Vol. 23, No. 5 ( 2018-09-01), p. 260-277
    Type of Medium: Online Resource
    ISSN: 1083-6101
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 2018
    detail.hit.zdb_id: 2024777-1
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  • 3
    Online Resource
    Online Resource
    Wiley ; 2013
    In:  Proteins: Structure, Function, and Bioinformatics Vol. 81, No. 7 ( 2013-07), p. 1156-1165
    In: Proteins: Structure, Function, and Bioinformatics, Wiley, Vol. 81, No. 7 ( 2013-07), p. 1156-1165
    Abstract: A set of grid type knowledge‐based energy functions is introduced for ϕ – χ 1 , ψ – χ 1 , ϕ – ψ , and χ 1 – χ 2 torsion angle combinations. Boltzmann distribution is assumed for the torsion angle populations from protein X‐ray structures, and the functions are named as statistical torsion angle potential energy functions. The grid points around periodic boundaries are duplicated to force periodicity, and the remedy relieves the derivative discontinuity problem. The devised functions rapidly improve the quality of model structures. The potential bias in the functions and the usefulness of additional secondary structure information are also investigated. The proposed guiding functions are expected to facilitate protein structure modeling, such as protein structure prediction, protein design, and structure refinement. Proteins 2013. Proteins 2013; 81:1156–1165. © 2013 Wiley Periodicals, Inc.
    Type of Medium: Online Resource
    ISSN: 0887-3585 , 1097-0134
    URL: Issue
    RVK:
    Language: English
    Publisher: Wiley
    Publication Date: 2013
    detail.hit.zdb_id: 1475032-6
    SSG: 12
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  • 4
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2015
    In:  Quality & Quantity Vol. 49, No. 4 ( 2015-7), p. 1381-1396
    In: Quality & Quantity, Springer Science and Business Media LLC, Vol. 49, No. 4 ( 2015-7), p. 1381-1396
    Type of Medium: Online Resource
    ISSN: 0033-5177 , 1573-7845
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2015
    detail.hit.zdb_id: 2003280-8
    SSG: 3,4
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  • 5
    In: Enzyme Research, Hindawi Limited, Vol. 2011 ( 2011-08-03), p. 1-12
    Abstract: Creatine kinase (CK; EC 2.7.3.2) is related to several skin diseases such as psoriasis and dermatomyositis. CK is important in skin energy homeostasis because it catalyzes the reversible transfer of a phosphoryl group from MgATP to creatine. In this study, we predicted CK binding proteins via the use of bioinformatic tools such as protein-protein interaction (PPI) mappings and suggest the putative hub proteins for CK interactions. We obtained 123 proteins for brain type CK and 85 proteins for muscle type CK in the interaction networks. Among them, several hub proteins such as NFKB1, FHL2, MYOC, and ASB9 were predicted. Determination of the binding factors of CK can further promote our understanding of the roles of CK in physiological conditions.
    Type of Medium: Online Resource
    ISSN: 2090-0414
    Language: English
    Publisher: Hindawi Limited
    Publication Date: 2011
    detail.hit.zdb_id: 2573712-0
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  • 6
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2017
    In:  Scientometrics Vol. 113, No. 1 ( 2017-10), p. 61-81
    In: Scientometrics, Springer Science and Business Media LLC, Vol. 113, No. 1 ( 2017-10), p. 61-81
    Type of Medium: Online Resource
    ISSN: 0138-9130 , 1588-2861
    RVK:
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2017
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    SSG: 11
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  • 7
    In: Journal of Medical Internet Research, JMIR Publications Inc., Vol. 22, No. 8 ( 2020-8-10), p. e15040-
    Abstract: To implement standardized machine-processable clinical sequencing reports in an electronic health record (EHR) system, the International Organization for Standardization Technical Specification (ISO/TS) 20428 international standard was proposed for a structured template. However, there are no standard implementation guidelines for data items from the proposed standard at the clinical site and no guidelines or references for implementing gene sequencing data results for clinical use. This is a significant challenge for implementation and application of these standards at individual sites. Objective This study examines the field utilization of genetic test reports by designing the Health Level 7 (HL7) Fast Healthcare Interoperability Resources (FHIR) for genomic data elements based on the ISO/TS 20428 standard published as the standard for genomic test reports. The goal of this pilot is to facilitate the reporting and viewing of genomic data for clinical applications. FHIR Genomics resources predominantly focus on transmitting or representing sequencing data, which is of less clinical value. Methods In this study, we describe the practical implementation of ISO/TS 20428 using HL7 FHIR Genomics implementation guidance to efficiently deliver the required genomic sequencing results to clinicians through an EHR system. Results We successfully administered a structured genomic sequencing report in a tertiary hospital in Korea based on international standards. In total, 90 FHIR resources were used. Among 41 resources for the required fields, 26 were reused and 15 were extended. For the optional fields, 28 were reused and 21 were extended. Conclusions To share and apply genomic sequencing data in both clinical practice and translational research, it is essential to identify the applicability of the standard-based information system in a practical setting. This prototyping work shows that reporting data from clinical genomics sequencing can be effectively implemented into an EHR system using the existing ISO/TS 20428 standard and FHIR resources.
    Type of Medium: Online Resource
    ISSN: 1438-8871
    Language: English
    Publisher: JMIR Publications Inc.
    Publication Date: 2020
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  • 8
    Online Resource
    Online Resource
    Wiley ; 2012
    In:  Journal of Computational Chemistry Vol. 33, No. 24 ( 2012-09-15), p. 1927-1935
    In: Journal of Computational Chemistry, Wiley, Vol. 33, No. 24 ( 2012-09-15), p. 1927-1935
    Type of Medium: Online Resource
    ISSN: 0192-8651
    RVK:
    Language: English
    Publisher: Wiley
    Publication Date: 2012
    detail.hit.zdb_id: 1479181-X
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  • 9
    Online Resource
    Online Resource
    Public Library of Science (PLoS) ; 2014
    In:  PLoS Computational Biology Vol. 10, No. 3 ( 2014-3-27), p. e1003519-
    In: PLoS Computational Biology, Public Library of Science (PLoS), Vol. 10, No. 3 ( 2014-3-27), p. e1003519-
    Type of Medium: Online Resource
    ISSN: 1553-7358
    Language: English
    Publisher: Public Library of Science (PLoS)
    Publication Date: 2014
    detail.hit.zdb_id: 2193340-6
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  • 10
    In: Cancer Research, American Association for Cancer Research (AACR), Vol. 83, No. 7_Supplement ( 2023-04-04), p. 5865-5865
    Abstract: Introduction: Unmet needs exist for immunotherapy targeting PD-1/PD-L1 in head and neck squamous cell carcinoma (HNSCC) and lung squamous cell carcinoma (LUSC) due to its suboptimal response. Amivantamab, a bispecific antibody targeting epidermal growth factor receptor (EGFR) and c-Met, has been demonstrated to induce antibody-dependent cytotoxicity and trogocytosis in tumor cells. We hypothesized that combination of amivantamab with pembrolizumab may synergistically enhance antitumor immunity. In this study, we present comprehensive immunomodulatory and synergistic antitumor efficacy of amivantamab and pembrolizumab in humanized HNSCC and LUSC mice models. Methods: EGFR and MET-expressing tumors from a HNSCC and a LUSC patient were transplanted into Hu-CD34-NSG to establish humanized patient-derived xenograft (PDX) models. Tumor-bearing PDXs were treated with vehicle, pembrolizumab (10mpk, Q5D, n=10), amivantamab (10mpk, BIW, n=10), or a combination of pembrolizumab and amivantamab (n=10). Analysis of immune modulatory responses within the tumor microenvironment (TME) using multiplexed IHC, flow cytometry, and single cell RNA sequencing was performed. Results: Combination of amivantamab and pembrolizumab showed a significant reduction of tumor volume (p & lt;0.001) compared to vehicle or single treatment in both models. Additionally, significantly longer survival was observed for combination treated compared to the vehicle treated groups (p & lt;0.0001). Multispectral imaging of tumor indicated that granzyme B-producing CD8+ T cells were significantly increased within the tumor in the combination group (p & lt;0.01). Further analysis of T cell subsets suggested that central memory type CD8+ T cells were increased upon combination treatment. This group also demonstrated significantly higher CEA-tetramer positive CD8+ T cells in the tumor (p & lt;0.01), suggesting that cytotoxic T cells recognizing tumor specific antigens enhanced antitumor immune response. Single cell RNA sequencing analysis of HNSCC showed that an EGFRhighMEThigh cluster was enriched in the TME after pembrolizumab treatment. This subcluster had elevated glycolysis and lactic acid pathway-related genes compared to EGFRlowMETlow cluster. Lactate transporter, MCT4 (SLC16A3) and LDHA genes were dramatically increased in the EGFRhighMEThigh cluster. Elevated lactic acid pathway may lead to immune evasion in the tumor, dampening the activity of pembrolizumab. Interestingly, combination treatment with amivantamab could reduce EGFRhighMEThigh cluster, and could effectively control tumor via creating favorable immune TME. Conclusion: Our study demonstrated combinatorial benefits of amivantamab and pembrolizumab by effectively remodeling TME, providing a preclinical rationale to clinically combine amivantamab and PD-1 blockade treatments. Citation Format: Sun Min Lim, Chun-Bong Synn, Seong-san Kang, DongKwon Kim, Soo-Hwan Lee, Sujeong Baek, Seung Min Yang, Yu Jin Han, Mi hyun Kim, Heekyung Han, Kwangmin Na, Young Taek Kim, Sungwoo Lee, Mi Ran Yun, Jae Hwan Kim, Youngseon Byeon, Young Seob Kim, Jii Bum Lee, Ji Yun Lee, Chang Gon Kim, Min Hee Hong, Kyoung-Ho Pyo, Joshua Curtin, Bharvin Patel, Isabelle Bergiers. Combinatorial activity of amivantamab and pembrolizumab in head and neck squamous cell carcinoma and lung squamous cell carcinoma expressing wild-type EGFR and MET [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2023; Part 1 (Regular and Invited Abstracts); 2023 Apr 14-19; Orlando, FL. Philadelphia (PA): AACR; Cancer Res 2023;83(7_Suppl):Abstract nr 5865.
    Type of Medium: Online Resource
    ISSN: 1538-7445
    Language: English
    Publisher: American Association for Cancer Research (AACR)
    Publication Date: 2023
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