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  • 1
    In: Biodiversity Data Journal, Pensoft Publishers, Vol. 7 ( 2019-09-11)
    Abstract: Environmental DNA [eDNA] metabarcoding has recently emerged as a non-destructive alternative to traditional sampling for characterising species assemblages. We here provide a consistent dataset synthetising all eDNA sampling sites in French Guiana to date. Field collections have been initiated in 2014 and have continued until 2019. This dataset is however a work in progress and will be updated after each collecting campaign. We also provide a taxon by site matrix for fishes presence / absence as inferred from eDNA. Our aim is to allow a transparent communication to the stakeholders and provide the foundation for a monitoring programme based on eDNA. The lastest version of the dataset is publicly and freely accessible through the CEBA geoportal (http://vmcebagn-dev.ird.fr) or through the French Guiana geographic portal (https://www.geoguyane.fr).
    Type of Medium: Online Resource
    ISSN: 1314-2828 , 1314-2836
    Language: Unknown
    Publisher: Pensoft Publishers
    Publication Date: 2019
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  • 2
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2015
    In:  Hydrobiologia Vol. 742, No. 1 ( 2015-1), p. 95-105
    In: Hydrobiologia, Springer Science and Business Media LLC, Vol. 742, No. 1 ( 2015-1), p. 95-105
    Type of Medium: Online Resource
    ISSN: 0018-8158 , 1573-5117
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2015
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    detail.hit.zdb_id: 214428-1
    SSG: 12
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  • 3
    In: Ecological Indicators, Elsevier BV, Vol. 52 ( 2015-05), p. 332-340
    Type of Medium: Online Resource
    ISSN: 1470-160X
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2015
    detail.hit.zdb_id: 2063587-4
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  • 4
    In: Chemosphere, Elsevier BV, Vol. 268 ( 2021-04), p. 128820-
    Type of Medium: Online Resource
    ISSN: 0045-6535
    RVK:
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2021
    detail.hit.zdb_id: 1496851-4
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  • 5
    Online Resource
    Online Resource
    EDP Sciences ; 2016
    In:  Hydroécologie Appliquée Vol. 19 ( 2016), p. 321-355
    In: Hydroécologie Appliquée, EDP Sciences, Vol. 19 ( 2016), p. 321-355
    Type of Medium: Online Resource
    ISSN: 1147-9213 , 1958-556X
    Language: English
    Publisher: EDP Sciences
    Publication Date: 2016
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  • 6
    In: Neotropical Ichthyology, FapUNIFESP (SciELO), Vol. 7, No. 4 ( 2009), p. 683-692
    Abstract: Peixes são conhecidos pela grande plasticidade fenotípica com que respondem às características do meio, o que lhes permite aumentar as chances de sucesso frente a variações ambientais. No presente trabalho foram examinadas as respostas biológicas de teleósteos após uma abrupta modificação no ambiente provocada pelo represamento dos rios. Dois reservatórios de diferentes idades, situados no norte da América do Sul, foram investigados: um mais jovem (14 anos), Petit-Saut, na Guiana Francesa, e outro mais antigo (44 anos), Brokopondo, no Suriname. Em 14 espécies de peixes foram avaliados seis atributos biológicos, os quais foram comparados com a situação apresentada no rio Sinnamary antes do enchimento do Reservatório Petit-Saut. Avaliamos o tamanho máximo dos indivíduos, os comprimentos absoluto e relativo de primeira maturação, a proporção de ovócitos maduros em gônadas desovantes, a fecundidade por lote, e o tamanho médio dos ovócitos maduros. Os resultados indicam ter havido aumento do esforço reprodutivo com a formação dos reservatórios. Todas as espécies tiveram redução de tamanho. Comparados aos valores observados antes da formação dos reservatórios, oito espécies tiveram ovócitos maiores e três espécies mostraram aumento da fecundidade por lote. A constatação dessas mudanças aponta para a adoção de estratégias de ocupação pioneira. Aquelas observadas no Reservatório Petit-Saut parecem também aplicar-se ao Reservatório Brokopondo, 30 anos mais antigo, sugerindo que esses reservatórios mantêm-se em condição imatura por muito tempo
    Type of Medium: Online Resource
    ISSN: 1679-6225
    Language: Unknown
    Publisher: FapUNIFESP (SciELO)
    Publication Date: 2009
    detail.hit.zdb_id: 2397002-9
    SSG: 12
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  • 7
    In: Blood, American Society of Hematology, Vol. 122, No. 21 ( 2013-11-15), p. 3373-3373
    Abstract: Philadelphia negative myeloproliferative or myeloproliferative/myelodysplastic neoplasms may evolve towards secondary acute myeloid leukemia (AML). The prognosis of such secondary leukemia is very poor. At present, there are only a few reports assessing the outcome of adult patients with a philadelphia negative myeloproliferative or myeloproliferative/myelodysplastic neoplasm in blast phase (MPN-BP) who received allogeneic stem cell transplantation (allo-SCT). Patients and Methods in this retrospective study, inclusion criteria were: (i) adult patients with a MPN-BP (ii) who received first allo-SCT (iii) between 2000 and 2010 (iv) irrespective of the stem cell source or conditioning regimen. MPN with 〈 20% blasts in blood/bone marrow and AML secondary to myelodysplastic syndromes were excluded from this analysis. Results 60 patients were included. MPN, AML and allo-SCT characteristics are described in table 1. Median age at allo-SCT was 57 (range, 30-68). Patients received allo-SCT in first complete remission (CR1), CR2 or in advanced disease in 22 (37%), 4 (7%) and 34(57%) of cases, respectively. Engraftment was achieved in 55 cases (92%). With a median follow-up of 31 months (range, 25-44), the 3-year overall survival (OS) and Leukemia-Free-Survival (LFS) were respectively 18% and 9%. The 3-year transplant-related mortality (TRM) was 24% whereas relapse incidence was 68%. The 3-year LFS of patients grafted in CR (n=26) was 18% whereas the 3-year LFS of patients allografted in advanced disease (n=34) was only 3% (p=0.008). In the CR group, the 3-year TRM was 24% whereas relapse incidence was 61%. Intermediate or good AML karyotype (3-year LFS of 33% versus 10% for adverse AML karyotype, p=0.03) and the absence of a previous thrombotic event (3-year LFS of 24% versus 0, p=0.02) were associated with an improved LFS in patients allografted in CR. Conclusion These results suggest that the outcome of patients with a MPN-BP is dismal despite allo-SCT due to a high relapse incidence even in patients transplanted in CR. Outside a clinical trial, allo-SCT should be mainly proposed to patients in CR. New strategies are mandatory to improve the outcome of patients in blast phase. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2013
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  • 8
    In: Blood, American Society of Hematology, Vol. 128, No. 22 ( 2016-12-02), p. 980-980
    Abstract: Introduction: Allogeneic stem cell transplantation is a potentially curative treatment for patients with high-risk non-Hodgkin lymphoma (NHL). Fludarabine/busulfan based conditioning regimens are widely used in Europe for this purpose. Busulfan dose intensity discriminates between reduced intensity (FB2, 2 days of busulfan at 4 mg/Kg/d per os or 3.2 mg/kg/d iv) and reduced-toxicity myeloablative (FB3/FB4, 3 or 4 days of busulfan at 4 mg/Kg/d per os or 3.2 mg/kg/d iv) conditioning regimens (Bacigalupo, 2009). While some data have been recently published showing some advantages of higher busulfan dose intensity for myeloid malignancies, there is no such data available in the lymphoid setting. Methods: This was a large retrospective study conducted on behalf of the SFGM-TC including all adults allografted in France between January 2004 and December 2014 for NHL (n=378). Clinical data were obtained through ProMISe (Project Manager Internet Server), an internet-based system shared by all French transplantation centers. We aim to compare various outcomes (overall (OS) and lymphoma free (LFS) survivals, relapse incidence (RI), non-relapse mortality (NRM), acute and chronic GVHD) between those who received FB2 (n=277) or FB3/FB4 (n=101) as conditioning regimens. GVHD free relapse free survival (GRFS) was also studied (defined as alive with no previous grade III-IV aGvHD, no moderate or severe chronic GvHD (cGvHD) and no relapse). Results: Both groups were comparable for the following variables: median follow-up (FB2: 24.9 vs FB3/4: 23 months), gender (male 61% vs 53%), disease type (low-grade lymphoma 25% vs 21%, mantle-cell lymphoma 17% vs 13%, high-grade lymphoma 25% vs 21%, T cell lymphoma 32% vs 45%), disease status at transplant (complete remission/very good partial response 64% vs 62%, partial response 28% vs 31%, active disease 8% vs 7%), donor type (sibling 43% vs 49.5%, matched unrelated 56% vs 47), median number of previous courses of treatment (2 vs 2, p=0.44), stem cell source (peripheral blood 96% vs 95%). FB2 patients were significantly older (median 57.3 vs 53.1 years, p=0.07), have been transplanted more recently (median year of transplant: 2011 vs 2010, p=0.001) and have been more previously autografted (69% vs 50.5%, p=0.001). FB3/4 patients have been allotransplanted earlier during the evolution of their disease (median time between diagnosis and allograft 18.2 vs 33.8 months, p 〈 0.0001). The majority of patients (n=353, 98.4%) received ATG as GVHD prophylaxis. Engraftment was observed in 97.8% of FB2 patients vs 100% of FB3/4 cases (p=0.13). In univariate analysis, 2-years OS (FB2 66.5% vs 60.3%, p=0.33), LFS (FB2 57.9% vs 49.8%, p=0.26), RI (FB2 23% vs 29.1%, p=0.32) and NRM (FB2 19% vs 21.1%, p=0.91) were similar between both groups. Cumulative incidence of grade 3-4 acute (FB2 11.2% vs 18%, p=0.08) and extensive chronic (FB2: 17.3% vs 10.7%, p=0.18) GVHD were also comparable as well as 2-year GRFS (FB2: 44.4% vs 42.8%, p=0.38). When considering patients allografted before or after the median time between diagnosis and the time of allograft for the whole cohort ( 〈 or 〉 =30 months), there were also no significant differences between both groups in terms of OS, LFS, RI or NRM. In multivariate analysis there was a trend for worse outcome using FB3/FB4 regimens (OS: HR 1.46, 95%CI: 0.96-2.23, p=0.07; LFS: HR: 1.43, 95%CI: 0.99-2.06, p=0.05; RI: HR 1.54; 95%CI: 0.95-2.48, p=0.07). These results were also confirmed using a propensity score-matching strategy including 184 FB2 and 98 FB3/4 patients. Conclusion: This large retrospective study showed that reduced toxicity myeloablative fludarabine/busulfan regimens did not improve outcomes of adults allografted for NHL. FB2 conditioning regimen still should be considered as the standard of care conditioning regimen in this setting. To validate these results, prospective studies are needed, like the French prospective trial currently ongoing for myeloid diseases (NCT01985061). Also, new conditioning regimens and post-allograft strategies should be tested to improve outcomes of patients. Disclosures Peffault De Latour: NOVARTIS: Consultancy, Honoraria, Research Funding; PFIZER: Consultancy, Honoraria, Research Funding; ALEXION: Consultancy, Honoraria, Research Funding.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2016
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  • 9
    In: Blood, American Society of Hematology, Vol. 128, No. 22 ( 2016-12-02), p. 3470-3470
    Abstract: INTRODUCTION Allogeneic hematopoietic cell transplantation (allo-HCT) is the only curative option for high-risk myelodysplastic syndrome (MDS). Yet, allo-HCT is associated with potentially life-threatening complications such as conditioning-regimen toxicity, graft-versus-host disease (GVHD) and relapse. The ever-rising number of patients undergoing allo-HCT yields an increase of those requiring admission to an intensive care unit (ICU). Despite ICU outcome improvement, ICU admission is not the solution for all patients. Although ICU triage policies are intended to identify patients more likely to recover from life-threatening complications, they may lack of specificity as they often include very heterogeneous cohorts of patients with regard of underlying disease, patient's characteristics and transplantation modalities. It is therefore crucial to more accurately identify prognostic factors that affect the overall survival (OS) of patients treated with allo-HCT. We hereby aimed to establish a prognostic scoring system for OS inclusive of early post-transplant complications suitable to guide clinicians when ICU admission is pondered. PATIENTS AND METHODS The SFGM-TC database (PROMISE) was used to retrieve data from patients who underwent allo-HCT for MDS. A derivation cohort comprised data from January 1999 to December 2009. A validation cohort comprised data from January 2010 to December 2013. We included patients above 18 years of age, receiving a first sibling or HLA-matched unrelated allo-HCT at the allele level (so-called 10/10) and surviving more than 100 days after HCT. Patients could receive either bone marrow or peripheral blood stem cells. We excluded patients who received allo-HCT from an HLA-mismatched, haplo-identical donor, or ex-vivo T-cell depleted graft. To identify prognostic factors of 3-year OS, disease characteristics, donor and patients characteristics, transplantation modalities and early post-transplant complications were analyzed using a multivariable Cox model. Discrimination and calibration performance of the modelwas assessed by calculating c-index and comparing predicted and observed survivals. Finally, to favor daily use in clinical routine, we turned our prediction model into a point scoring system, in which each predictable variable was weighted by the nearest approximation of hazard ratio. RESULTS The derivation cohort included 393 patients and the validation cohort included 391 patients. The median follow-up from transplantationwas 3.8 years (range, 0.3 to 11.8 years) and 2.9 years (range, 0.4 to 5.5 years), respectively. The backward stepwise regression analysis revealed 3 independent predictors of 3-year OS: (i) the grade of acute GVHD (0/I vs. II vs. III/IV), (ii) the relapse before day 100 and (iii) the lack of platelet recovery before day 100 (Table 1). After over-optimism correction, the discrimination of the selected prognostic model was 0.67 (95%CI, 0.63-0.71) with a shrinkage factor of 0.903. A similar discrimination value was found in the validation cohort 0.65 (95%CI, 0.61-0.69) The point scoring system ranged from 0 to 8, discriminating low- (0), intermediate- (1 to 3), and high-risk (4 to 8) patients, according to survival prognosis (Table 2). The observed 3-year OS after transplantation in patients with low, intermediate and high scores was 70% (95%CI, 63% to 76%), 46% (95%CI, 38% to 55%) and 6% (95%CI, 2% to 16%) respectively (Figure 1). CONCLUSION We created then validated the first triage prognostic score based on early post-transplant complications, to quickly and simply estimate the survival probability after day 100 when ICU is to be considered. Our findings support the robustness, the reliability and the reproducibility of this scoring system. Additional studies are required to assess whether this scoring system may be suitable for hematologic malignancies other than MDS. Calibration of survival probability for the continuous prognostic model in the derivation cohort. Calibration of survival probability for the continuous prognostic model in the derivation cohort. Figure Figure. Disclosures Michallet: Bristol-Myers Squibb: Consultancy, Honoraria, Research Funding; Pfizer: Consultancy, Honoraria; Novartis: Consultancy, Honoraria; Pfizer: Consultancy, Honoraria; Astellas Pharma: Consultancy, Honoraria; MSD: Consultancy, Honoraria; Genzyme: Consultancy, Honoraria. Peffault De Latour:Novartis: Consultancy, Honoraria, Research Funding; Pfizer: Consultancy, Honoraria, Research Funding; Alexion: Consultancy, Honoraria, Research Funding; Amgen: Research Funding.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2016
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  • 10
    In: Blood, American Society of Hematology, Vol. 126, No. 23 ( 2015-12-03), p. 1908-1908
    Abstract: Purpose: The FB2A2 (fludarabine, intermediate doses of busulfan and ATG) reduced-intensity conditioning (RIC) regimen is considered as a standard RIC regimen in many centers worldwide. Recently, we have reported the prospective good results of a clofarabine-busulfan containing RIC regimen (CloB2A2) in adults with high-risk acute myeloid leukemia (AML) or myelodysplastic syndrome (MDS) in complete remission (CR) at time of transplant (Chevallier et al, Haematologica, 2014). Thus, this regimen may prove to be superior to the FB2A2 regimen in patients with AML/MDS. Patients and Methods: The aim of this study was to compare outcomes between adult AML/MDS patients who have received, between 2009 and 2015, in 26 French centers, either a FB2A2 RIC regimen (n=170, male 61%, median age: 58 years, AML 86%, CR1 79%) or the CloB2A2 RIC regimen (n=39, including the 16 cases treated within the prospective trial mentioned above, male 62%, median age: 61 years, AML 62%, CR1 64%). The FB2A2 and CloB2A2 regimens consisted of either 30 mg/m²/day Fludarabine for 5 days or 30mg/m²/day Clofarabine for 4 or 5 days, each combined with 3.2 mg/kg/day Busulfan for 2 days and 2.5 mg/kg/day Anti-thymocyte globulin (ATG, Thymoglobuline) for 2 days. As GVHD prophylaxis, cyclosporine (CsA) alone was used in case of related donor in both groups, and for the 16 CloB2A2 patients treated within the prospective trial, while CsA+ MMF were used in case of unrelated donors. The two groups were not statistically different in term of gender, median age and performans status at transplant, median white blood count at diagnosis, median time between diagnosis and transplant, type of donors or cytogenetics for AML patients. Conversely, there were more AML patients (86% vs 62%, p=0.0004) and more patients in CR1 (79% vs 64%, p=0.04) in the FB2A2 group. Also, CloB2A2 patients were transplanted more recently (median year of transplant: 2014 vs 2011, p 〈 0.0001). Results: All patients engrafted, except one in the FB2A2 group. Median time of neutrophils recovery was similar between both groups (FB2A2: 17 days vs CloB2A2: 18 days, p=0.10). With a median follow-up of 28 and 14 months in the FB2A2 and the CloB2A2 groups, respectively, 2-year overall survival (OS) were 59% (51.4-66.7) for the former vs 77% (62.8-91.1) for the latter, p=0.07, 2-year leukemia-free survival (LFS) were 52.7% (44.9-60.4) vs 64% (48.1-79.9), p=0.23, 2-year relapse incidence were 31.1% (24.2-38.4) vs 27.5% (14-42.9), p=0.58, 2-year non relapse mortality were 16.2% (5.8-31.3) vs 8.5% (2.1-20.7), p=0.26 and 2-year chronic GVHD were 13.8% (8.3-20.5) vs 23.9% (8.1-44.2), p=0.12. Incidences of grade 2-4 or grade 3-4 acute GVHD were similar between both groups: FB2A2 22% vs CloB2A2 23%, p=0.86,and 8% vs 3%, p= 0.31. In multivariate analysis, FB2A2 RIC regimen was significantly associated with lower OS and LFS (HR: 2.45; 95%CI: 1.08-5.55, p=0.03; and HR: 2.32; 95%CI: 1.12-4.79, p=0.02) contrary to CR1 status which was associated with significant higher survivals (HR: 0.48; 95%CI: 0.28-0.83, p=0.008 and HR: 0.42; 95%CI: 0.25-0.70, p=0.001). MDS (HR: 1.88; 95%CI: 1.03-3.43, p=0.03) and higher WBC at diagnosis ( 〉 median) (HR: 1.76; 95%CI: 1.10-2.82, p=0.01) were also significantly associated with lower LFS. However, when considering AML and MDS patients separately, benefit of CLOB2A2 RIC regimen appears to be restricted to AML patients (2-year OS FB2A2: 58.1% vs CloB2A2: 80.2%; HR: 2.45; 95%CI: 1.08-5.55, p=0.03; and 2-year LFS FB2A2: 53.6%, vs CloB2A2: 76.9%; HR: 2.32; 95%CI: 1.12-4.79, p=0.02). Conclusion: Thisretrospective comparison suggests thattheCloB2A2 RIC regimen can likely provide a higher survival compared to the use of a FB2A2 RIC regimen for AML patients. A prospective phase 3 randomized study is warranted. Disclosures Deconinck: JANSSEN: Other: Travel for international congress; NOVARTIS: Other: Travel for international congress; ALEXION: Other: Travel for international congress; ROCHE: Research Funding; PFIZER: Research Funding; CHUGAI: Other: Travel for international congress; LFB loboratory: Consultancy. Mohty:Janssen: Honoraria; Celgene: Honoraria.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
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    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2015
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
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