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  • 1
    In: Animals, MDPI AG, Vol. 13, No. 14 ( 2023-07-13), p. 2290-
    Abstract: This article presents the results of virological and genetic studies of an isolate of caprine arthritis encephalitis (CAE) virus from the republic of Mordovia, Russian Federation. The isolate was found during monitoring studies of goat blood samples for the viral genome, and the presence of antibodies to lentiviruses was detected. According to the recommendation of the OIE, the positive result of PCR was confirmed with nucleotide sequencing. It was found that the obtained nucleotide sequence is identical to the genome of small ruminant lentiviruses presented in the GenBank database. Phylogenetic analysis showed that the isolate “Mordovia-2018” was included in the same cluster with an isolate from the Tver region of the Russian Federation detected in 2008. The sequence of the fragment of the env-gene of the isolate from the republic of Mordovia is available in GenBank under the number MN186380.1. To isolate the virus, a fraction of peripheral blood monocyte cells from the animal’s blood was added to a monolayer of lamb synovial membrane cell culture, and ten passages were carried out. The first manifestations of the cytopathic effect were observed after the third passage on the eighth day of cultivation in the form of single large cells of irregular shape with 5–7 nuclei. At the seventh passage, multiple syncytium with 7–12 nuclei were observed. At subsequent passage levels, the formation of syncytium containing more than 10–14 nuclei was observed.
    Type of Medium: Online Resource
    ISSN: 2076-2615
    Language: English
    Publisher: MDPI AG
    Publication Date: 2023
    detail.hit.zdb_id: 2606558-7
    SSG: 23
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  • 2
    In: Frontiers in Veterinary Science, Frontiers Media SA, Vol. 8 ( 2021-8-5)
    Abstract: African swine fever (ASF) is an emerging viral contagious disease affecting domestic pigs (DP) and wild boar (WB). ASF causes significant economic damage to the pig industry worldwide due to nearly 100% mortality and the absence of medical treatments. Since 2019, an intensive spread of ASF has been observed in the Russian Far East region. This spread raises concerns for epidemiologists and ecologists given the potential threat to the WB population, which is an essential member of the region's wild ungulates and provides a notable share of food resources for predatory species. This study aims to determine the genotype of ASF virus circulating in the region, reveal the spatio-temporal patterns of the ASF outbreaks' emergence, and assess the potential reduction of the regional fauna because of expected depopulation of WB. The first historical case of ASF in the study region was caused by an African swine fever virus (ASFV) isolated from DPs and belonging to Genotype 2, CVR1; IGR-2 (TRS +). Sequencing results showed no significant differences among ASFV strains currently circulating in the Russian Federation, Europe, and China. The spatiotemporal analysis with the space-time permutations model demonstrated the presence of six statistically significant clusters of ASF outbreaks with three clusters in DPs and one cluster in WBs. DP outbreaks prevail in the north-west regions of the study area, while northern regions demonstrate a mixture of DP and WB outbreaks. Colocation analysis did not reveal a statistically significant pattern of grouping of one category of outbreaks around the others. The possible damage to the region's fauna was assessed by modeling the total body mass of wild ungulates before and after the wild boars' depopulation, considering a threshold density of WB population of 0.025 head/km 2 , according to the currently in force National Plan on the ASF Eradication in Russia. The results suggest the total mass of ungulates of the entire study region will likely decrease by 8.4% (95% CI: 4.1–13.0%), while it may decrease by 33.6% (19.3–46.1%) in the Primorsky Krai, thereby posing an undeniable threat to the predatory species of the region.
    Type of Medium: Online Resource
    ISSN: 2297-1769
    Language: Unknown
    Publisher: Frontiers Media SA
    Publication Date: 2021
    detail.hit.zdb_id: 2834243-4
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  • 3
    Online Resource
    Online Resource
    Frontiers Media SA ; 2024
    In:  Frontiers in Veterinary Science Vol. 11 ( 2024-2-8)
    In: Frontiers in Veterinary Science, Frontiers Media SA, Vol. 11 ( 2024-2-8)
    Abstract: Avian influenza (AI) is a global problem impacting birds and mammals, causing economic losses in commercial poultry farms and backyard settings. In 2022, over 8,500 AI cases were reported worldwide, with the H5 subtype being responsible for many outbreaks in wild and domestic birds. In the territory of the Russian Federation, outbreaks of AI have been massively reported since 2020, both among domestic bird species and wild bird species. Wild migratory birds often serve as natural reservoirs for AI viruses, and interactions between bird species can lead to the emergence of new, highly pathogenic variants through genetic recombination between strains. In order to combat the widespread outbreaks of the disease and potential risks of further spread in 2021, monitoring studies were conducted in the Samara Oblast, the southeastern region of European Russian Federation. These studies aimed to diagnose and characterize circulating AI virus variants among wild migratory birds during waterfowl hunting in areas of mass nesting. Among the 98 shot birds, a highly pathogenic A/H5N1 AI virus was detected in a Eurasian Teal from the Bolshechernigovsky district. It was classified into clade 2.3.4.4 based on the cleavage site structure of HA. Phylogenetic analysis showed a high relatedness of the identified strain in the Samara Oblast with field isolates from Russia, Nigeria, Bangladesh, and Benin. The article emphasizes the importance of monitoring AI virus spread in both wild and poultry, highlighting the need for timely information exchange to assess risks. Further comprehensive studies are necessary to understand virus dissemination pathways.
    Type of Medium: Online Resource
    ISSN: 2297-1769
    Language: Unknown
    Publisher: Frontiers Media SA
    Publication Date: 2024
    detail.hit.zdb_id: 2834243-4
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  • 4
    In: Acta Veterinaria, Walter de Gruyter GmbH, Vol. 70, No. 1 ( 2020-03-01), p. 92-109
    Abstract: Three recombinant plasmid constructs, expressing chimeric proteins containing human ubiquitin fused to an ectodomain of one of the potentially protective proteins (p30, p54 and CD2v) of the attenuated MK-200 strain of African swine fever virus (ASFV), were created as potential inductors of specific antiviral cellular immunity. Three-time immunization of pigs with the mixture of these plasmids led to the formation of virus-specific cytotoxic T-lymphocytes (CTL), but did not induce production of virus-specific antibodies. After challenge with the homologous parental virulent ASFV strain M-78 at a dose of 10 3 HAD 50 , all five animals (four immunized pigs and one naïve) fell between the 4th and 7th days post infection. The obtained results demonstrated that induction of CTL did not protect pigs against challenge with the virulent ASFV. Balanced activation of CTL and antibody-mediated cellular mechanisms should be investigated.
    Type of Medium: Online Resource
    ISSN: 1820-7448
    Language: English
    Publisher: Walter de Gruyter GmbH
    Publication Date: 2020
    detail.hit.zdb_id: 2380825-1
    SSG: 22
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  • 5
    In: Acta Veterinaria, Walter de Gruyter GmbH, Vol. 70, No. 3 ( 2020-09-01), p. 296-304
    Abstract: The article provides assessment of field and laboratory methods for the collection and evaluation of potential vectors of lumpy skin disease virus (LSDV) in one of the districts of Krasnodarskiy Kray in southern Russia. In this study, we tested several methods of vector collection and a PCR protocol for the detection of the LSDV genome in insects. Descriptive data on samples were collected using a free web-based application Epicollect5. Potential LSDV vectors are quite widely spread insects in this region. We identified 15 insect species, including Musca domestica , Musca autumnalis and Stomoxys calcitrans . Analysis of the insect population showed an increase in species diversity and a decrease in abundance of the insect population by the end of the flight season. PCR tests did not detect LSDV genome in the collected samples. All the methods tested were found suitable for large-scale monitoring of lumpy skin disease (LSD). Further studies on potential risk factors of LSD spread are necessary to improve measures on preventing and eliminating the disease.
    Type of Medium: Online Resource
    ISSN: 1820-7448
    Language: English
    Publisher: Walter de Gruyter GmbH
    Publication Date: 2020
    detail.hit.zdb_id: 2380825-1
    SSG: 22
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  • 6
    In: Pathogens, MDPI AG, Vol. 11, No. 4 ( 2022-03-26), p. 404-
    Abstract: African swine fever virus causes hemorrhagic disease in swine. Attenuated strains are reported in Africa, Europe, and Asia. Few studies on the diagnostic detection of attenuated ASF viruses are available. Two groups of pigs were inoculated with an attenuated ASFV. Group 2 was also vaccinated with an attenuated porcine reproductive and respiratory syndrome virus vaccine. Commercially available ELISA, as well as extraction and qPCR assays, were used to detect antibodies in serum and oral fluids (OF) and nucleic acid in buccal swabs, tonsillar scrapings, OF, and blood samples collected over 93 days, respectively. After 12 dpi, serum (88.9% to 90.9%) in Group 1 was significantly better for antibody detection than OF (0.7% to 68.4%). Group 1′s overall qPCR detection was highest in blood (48.7%) and OF (44.2%), with the highest detection in blood (85.2%) from 8 to 21 days post inoculation (dpi) and in OF (83.3%) from 1 to 7 dpi. Group 2′s results were not significantly different from Group 1, but detection rates were lower overall. Early detection of attenuated ASFV variants requires active surveillance in apparently healthy animals and is only reliable at the herd level. Likewise, antibody testing will be needed to prove freedom from disease.
    Type of Medium: Online Resource
    ISSN: 2076-0817
    Language: English
    Publisher: MDPI AG
    Publication Date: 2022
    detail.hit.zdb_id: 2695572-6
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  • 7
    In: Acta Veterinaria, Walter de Gruyter GmbH, Vol. 70, No. 1 ( 2020-03-01), p. 58-70
    Abstract: The article presents the results of a comparative study of the biological, molecular and genetic characteristics of African swine fever virus (ASFV) isolates, obtained from domestic pigs and wild boars in the Russian Federation and South Ossetia from 2016 to 2018. The studied isolates caused the death of pigs manifesting, as a rule, signs of an acute or subacute form of the disease when using various methods of infection including intramuscular, direct contact, intranasal and oral routes. The virus was hemadsorbing, belonging to serotype 8 and genotype II, and accumulated in the blood with a titer of 6.5 to 7.5 lg HAU 50 /cm 3 . The ASFV isolates circulating in the central region of Russia were found to have an insertion of 10 base pairs in the intergenic region I73R/I329L. However, the ASFV isolated in the Irkutsk region and South Ossetia, as well as Georgia 2007/1 (FR682468.1), lacked this insertion.
    Type of Medium: Online Resource
    ISSN: 1820-7448
    Language: English
    Publisher: Walter de Gruyter GmbH
    Publication Date: 2020
    detail.hit.zdb_id: 2380825-1
    SSG: 22
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  • 8
    Online Resource
    Online Resource
    Walter de Gruyter GmbH ; 2020
    In:  Acta Veterinaria Vol. 70, No. 2 ( 2020-06-01), p. 194-206
    In: Acta Veterinaria, Walter de Gruyter GmbH, Vol. 70, No. 2 ( 2020-06-01), p. 194-206
    Abstract: Currently, African swine fever (ASF) is one of the biggest global economic challenges in Europe and Asia. Despite all the efforts done to understand the mechanism of spread, presence and maintenance of ASF in domestic pigs and wild boar, there are still many gaps in the knowledge on its epidemiology. This study aims to describe spatial and temporal patterns of ASF spread in wild boar and domestic pigs in the country during the last three years. Methods of Spatio-temporal scanning statistics of Kulldorff (SatScan) and Mann-Kendell statistics (space-time cube) were used to identify potential clusters of outbreaks and the presence of hot spots (areas of active flare clusters), respectively. The results showed that ASF in the country has a local epidemic pattern of spread (11 explicit clusters in wild boar and 16 epizootic clusters were detected in the domestic pig population: 11 in the European part and 5 in the Asian part), and only six of them are overlapped suggesting that ASF epidemics in domestic pigs and wild boar are two separate processes. In the Nizhny Novgorod, Vladimir, Ivanovo, Novgorod, Pskov, Leningrad regions, the clusters identified are characterized as sporadic epidemics clusters, while in the Ulyanovsk region, Primorsky Territory, and the Jewish Autonomous Region the clusters are consistent. Considering the low biosecurity level of pig holdings in the far east and its close economic and cultural connections with China as well as other potential risk factors, it can be expected that the epidemic will be present in the region for a long time. The disease has spread in the country since 2007, and now it is reoccurring in some of the previously affected regions. Outbreaks in the domestic pig sector can be localized easily (no pattern detected), while the presence of the virus in wildlife (several consecutive hot spots detected) hampers its complete eradication. Although the disease has different patterns of spread over the country its driving forces remain the same (human-mediated spread and wild boar domestic-pigs mutual spillover). The results indicate that despite all efforts taken since 2007, the policy of eradication of the disease needs to be reviewed, especially measures in wildlife.
    Type of Medium: Online Resource
    ISSN: 1820-7448
    Language: English
    Publisher: Walter de Gruyter GmbH
    Publication Date: 2020
    detail.hit.zdb_id: 2380825-1
    SSG: 22
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  • 9
    In: Life, MDPI AG, Vol. 13, No. 7 ( 2023-06-30), p. 1489-
    Abstract: This article presents the results of a study on the susceptibility of laboratory animals to the lumpy skin disease virus (LSDV). Mice weighing 15–20 g, hamsters weighing 40–60 g, guinea pigs weighing 600–1200 g, and rabbits weighing 2.5–3 kg were used in this study. Nodules were observed on the skin of rabbits and hamsters at the sites of inoculation. The virus was isolated from the affected skin areas in cell culture and examined using real-time PCR, indicating its tropism for animal skin. The production of anticapripoxvirus antibodies was detected using the neutralization reaction, starting from 10 days after infection in mice, 27 days in rabbits, and 14 days in hamsters. Some laboratory animals exhibited multiple skin nodules. This indicates that these animal species may play a role in maintaining the epizootic process.
    Type of Medium: Online Resource
    ISSN: 2075-1729
    Language: English
    Publisher: MDPI AG
    Publication Date: 2023
    detail.hit.zdb_id: 2662250-6
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  • 10
    Online Resource
    Online Resource
    Frontiers Media SA ; 2021
    In:  Frontiers in Veterinary Science Vol. 8 ( 2021-8-24)
    In: Frontiers in Veterinary Science, Frontiers Media SA, Vol. 8 ( 2021-8-24)
    Abstract: African swine fever (ASF) is an incurable viral disease of domestic and wild pigs. A large-scale spread of ASF began in Eurasia in 2007 and has affected territories from Belgium to the Far East, occurring as both local- and regional-level epidemics. In 2020, a massive ASF epidemic emerged in the southeastern region of European Russia in the Samara Oblast and included 41 outbreaks of ASF in domestic pigs and 40 cases in wild boar. The Samara Oblast is characterized by a relatively low density of wild boar (0.04–0.05 head/km 2 ) and domestic pigs (1.1–1.3 head/km 2 ), with a high prevalence of small-scale productions (household farms). This study aims to understand the driving forces of the disease and perform a risk assessment for this region using complex epidemiological analyses. The socioeconomic and environmental factors of the ASF outbreak were explored using Generalized Linear Logistic Regression, where ASF infection status of the Samara Oblast districts was treated as a response variable. Presence of the virus in a district was found to be most significantly ( p & lt; 0.05) associated with the importation of live pigs from ASF-affected regions of Russia (OR = 371.52; 95% CI: 1.58–87290.57), less significantly ( p & lt; 0.1) associated with the density of smallholder farms (OR = 2.94; 0.82–10.59), volume of pork products' importation from ASF-affected regions of Russia (OR = 1.01; 1.00–1.02), summary pig population (OR = 1.01; 0.99–1.02), and insignificantly ( p & gt; 0.1) associated with presence of a common border with an ASF-affected region (OR = 89.2; 0.07–11208.64). No associations were found with the densities of pig and wild boar populations. The colocation analysis revealed no significant concentration of outbreaks in domestic pigs near cases in wild boar or vice versa. These results suggest that outbreaks notified in low biosecurity household farms were mainly associated with the transportation and trade of pigs and pork products from ASF-affected regions of Russia. The findings underline the importance of taking into account animal transportation data while conducting future studies to develop a risk map for the region and the rest of European Russia.
    Type of Medium: Online Resource
    ISSN: 2297-1769
    Language: Unknown
    Publisher: Frontiers Media SA
    Publication Date: 2021
    detail.hit.zdb_id: 2834243-4
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