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  • 1
    In: Palaeogeography, Palaeoclimatology, Palaeoecology, Elsevier BV, Vol. 331-332 ( 2012-05), p. 75-89
    Type of Medium: Online Resource
    ISSN: 0031-0182
    RVK:
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2012
    detail.hit.zdb_id: 1497393-5
    detail.hit.zdb_id: 417718-6
    SSG: 12
    SSG: 13
    SSG: 14
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  • 2
    In: Marine Micropaleontology, Elsevier BV, Vol. 169 ( 2021-12), p. 102058-
    Type of Medium: Online Resource
    ISSN: 0377-8398
    RVK:
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2021
    detail.hit.zdb_id: 1482923-X
    detail.hit.zdb_id: 197739-8
    SSG: 13
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  • 3
    Online Resource
    Online Resource
    Elsevier BV ; 2006
    In:  Marine Micropaleontology Vol. 58, No. 2 ( 2006-1), p. 73-82
    In: Marine Micropaleontology, Elsevier BV, Vol. 58, No. 2 ( 2006-1), p. 73-82
    Type of Medium: Online Resource
    ISSN: 0377-8398
    RVK:
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2006
    detail.hit.zdb_id: 1482923-X
    detail.hit.zdb_id: 197739-8
    SSG: 13
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  • 4
    Online Resource
    Online Resource
    Wiley ; 2019
    In:  Biological Reviews Vol. 94, No. 3 ( 2019-06), p. 828-848
    In: Biological Reviews, Wiley, Vol. 94, No. 3 ( 2019-06), p. 828-848
    Abstract: Large benthic Foraminifera (LBF) are major carbonate producers on coral reefs, and are hosts to a diverse symbiotic microbial community. During warm episodes in the geological past, these reef‐building organisms expanded their geographical ranges as subtropical and tropical belts moved into higher latitudes. During these range‐expansion periods, LBF were the most prolific carbonate producers on reefs, dominating shallow carbonate platforms over reef‐building corals. Even though the fossil and modern distributions of groups of species that harbour different types of symbionts are known, the nature, mechanisms, and factors that influence their occurrence remain elusive. Furthermore, the presence of a diverse and persistent bacterial community has only recently gained attention. We examined recent advances in molecular identification of prokaryotic (i.e. bacteria) and eukaryotic (i.e. microalgae) associates, and palaeoecology, and place the partnership with bacteria and algae in the context of climate change. In critically reviewing the available fossil and modern data on symbiosis, we reveal a crucial role of microalgae in the response of LBF to ocean warming, and their capacity to colonise a variety of habitats, across both latitudes and broad depth ranges. Symbiont identity is a key factor enabling LBF to expand their geographic ranges when the sea‐surface temperature increases. Our analyses showed that over the past 66 million years (My), diatom‐bearing species were dominant in reef environments. The modern record shows that these species display a stable, persistent eukaryotic assemblage across their geographic distribution range, and are less dependent on symbiotic photosynthesis for survival. By contrast, dinoflagellate and chlorophytic species, which show a provincial distribution, tend to have a more flexible eukaryotic community throughout their range. This group is more dependent on their symbionts, and flexibility in their symbiosis is likely to be the driving force behind their evolutionary history, as they form a monophyletic group originating from a rhodophyte‐bearing ancestor. The study of bacterial assemblages, while still in its infancy, is a promising field of study. Bacterial communities are likely to be shaped by the local environment, although a core bacterial microbiome is found in species with global distributions. Cryptic speciation is also an important factor that must be taken into consideration. As global warming intensifies, genetic divergence in hosts in addition to the range of flexibility/specificity within host–symbiont associations will be important elements in the continued evolutionary success of LBF species in a wide range of environments. Based on fossil and modern data, we conclude that the microbiome, which includes both algal and bacterial partners, is a key factor influencing the evolution of LBF. As a result, the microbiome assists LBF in colonising a wide range of habitats, and allowed them to become the most important calcifiers on shallow platforms worldwide during periods of ocean warming in the geologic past. Since LBF are crucial ecosystem engineers and prolific carbonate producers, the microbiome is a critical component that will play a central role in the responses of LBF to a changing ocean, and ultimately in shaping the future of coral reefs.
    Type of Medium: Online Resource
    ISSN: 1464-7931 , 1469-185X
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2019
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    detail.hit.zdb_id: 1476789-2
    SSG: 12
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  • 5
    In: Coral Reefs and Sea-Level Change: Quaternary Records and Modelling, International Association of Sedimentologists, ( 2022-12-01), p. 215-273
    Abstract: Understanding of global sea-level changes and coral reef development is poorly constrained during Marine Isotope Stage 3 (MIS 3; ~ 60 to 30 ka). Australia’s North West Shelf (NWS), at depths of ~ 50 to 120 m below present sea-level (mbsl), represents an ideal natural laboratory to address these knowledge gaps. In this study, the authors investigate a unique suite of sea-bed rock drill (PROD) cores recovered as part of a geotechnical survey from the NWS ~ 150 km south-east of Ashmore Reef. Twenty cores, penetrating to 28 m below sea floor, were collected from the top of the now drowned platform complex in similar water depths (74.8 to 81.6 mbsl), forming two transects ~ 17 km apart. High-resolution 3D seismic and multibeam bathymetry data reveal three distinct, multigenerational platforms that are rimmed by smaller reef terraces and bisected by deeper channels, placing the core transects into a robust, regional geomorphic context that includes a succession of linear palaeo-shorelines and tidal-estuarine channel systems on the adjacent shelf between ~ 90 to 110 mbsl. The authors have completed detailed logging, high-spatial resolution hyperspectral scanning, petrologic, mineralogic and sedimentary facies analysis of these cores, including a precise palaeoenvironmental reconstruction based on coral, algal and larger benthic foraminifera assemblages; and extensive radiometric dating. The authors have observed a complex suite of lithologies including in situ coralgal reef frameworks, well-lithified to friable grainstones, packstones and coralline algal floatstone facies separated by at least two major palaeosol horizons. Together with thirty 14C-AMS and closed-system U/Th ages spanning 10.7 to 〉  50 ka, the authors define a complex but consistent record of four distinct chrono-stratigraphic units (Units 1 to 4), representing a repeated succession of shallow reef to deep reef-slope depositional settings as the platforms experienced repeated sea-level oscillations (interstadial/stadial to glacial/deglacial) over the last 75,000 yr. Two distinct phases of shallow-water, high-energy reef development are defined. The age of the older, diagenetically distinct reef unit (Unit 3) is unknown but interpreted to have developed before the MIS 4 lowstand (~ 65 ka). However, firm chronological constraints on the MIS 3 development of the younger reef unit (Unit 2), place the position of relative sea-level (RSL) between ~ 63 to 75 + 1.8 mbsl by 45.95 to 39.23 + 0.2 ka, consistent with other predictions and observations for the region. Following its exposure and demise due to sea-level fall to the Last Glacial Maximum (LGM), the platform system was unable to re-establish fully as it was reflooded during the subsequent deglacial sea-level rise. Deeper reef slope (Unit 1) facies dominate the core tops between ~ 13.2 to 10.7 ka, representing a major hiatus in shallow-water reef development on the platforms. Deglacial sea-level rise was either too fast and/or other environmental conditions inadequate (i.e. massive riverine sediment flux due to the strengthening Australian summer monsoon and/or reworking of shelf sediments) to allow re-establishment of shallow-water coral reef development on the platforms apart from a few isolated and distal locations (i.e. Ashmore, Cartier, Adele and Scott Reefs).
    Type of Medium: Online Resource
    Language: Unknown
    Publisher: International Association of Sedimentologists
    Publication Date: 2022
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  • 6
    In: Science of The Total Environment, Elsevier BV, Vol. 537 ( 2015-12), p. 139-151
    Type of Medium: Online Resource
    ISSN: 0048-9697
    RVK:
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2015
    detail.hit.zdb_id: 1498726-0
    detail.hit.zdb_id: 121506-1
    SSG: 12
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  • 7
    Online Resource
    Online Resource
    Elsevier BV ; 2022
    In:  Science of The Total Environment Vol. 811 ( 2022-03), p. 151396-
    In: Science of The Total Environment, Elsevier BV, Vol. 811 ( 2022-03), p. 151396-
    Type of Medium: Online Resource
    ISSN: 0048-9697
    RVK:
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2022
    detail.hit.zdb_id: 1498726-0
    detail.hit.zdb_id: 121506-1
    SSG: 12
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  • 8
    Online Resource
    Online Resource
    Frontiers Media SA ; 2022
    In:  Frontiers in Marine Science Vol. 9 ( 2022-2-2)
    In: Frontiers in Marine Science, Frontiers Media SA, Vol. 9 ( 2022-2-2)
    Abstract: Traditional morphological methods for species identification are highly time consuming, especially for small organisms, such as Foraminifera, a group of shell-building microbial eukaryotes. To analyze large amounts of samples more efficiently, species identification methods have extended to molecular tools in the last few decades. Although a wide range of phyla have good markers available, for Foraminifera only one hypervariable marker from the ribosomal region (18S) is widely used. Recently a new mitochondrial marker cytochrome oxidase subunit 1 (COI) has been sequenced. Here we investigate whether this marker has a higher potential for species identification compared to the ribosomal marker. We explore the genetic variability of both the 18S and COI markers in 22 benthic foraminiferal morphospecies (orders Miliolida and Rotaliida). Using single-cell DNA, the genetic variability within specimens (intra) and between specimens (inter) of each species was assessed using next-generation sequencing. Amplification success rate was twice as high for COI (151/200 specimens) than for 18S (73/200 specimens). The COI marker showed greatly decreased intra- and inter-specimen variability compared to 18S in six out of seven selected species. The 18S phylogenetic reconstruction fails to adequately cluster multiple species together in contrast to COI. Additionally, the COI marker helped recognize misclassified specimens difficult to morphologically identify to the species level. Integrative taxonomy, combining morphological and molecular characteristics, provides a robust picture of the foraminiferal species diversity. Finally, we suggest the use of a set of sequences (two or more) to describe species showing intra-genomic variability additionally to using multiple markers. Our findings highlight the potential of the newly discovered mitochondrial marker for molecular species identification and metabarcoding purposes.
    Type of Medium: Online Resource
    ISSN: 2296-7745
    Language: Unknown
    Publisher: Frontiers Media SA
    Publication Date: 2022
    detail.hit.zdb_id: 2757748-X
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  • 9
    Online Resource
    Online Resource
    Cambridge University Press (CUP) ; 2014
    In:  The Paleontological Society Special Publications Vol. 13 ( 2014), p. 84-84
    In: The Paleontological Society Special Publications, Cambridge University Press (CUP), Vol. 13 ( 2014), p. 84-84
    Type of Medium: Online Resource
    ISSN: 2475-2622 , 2475-2681
    Language: English
    Publisher: Cambridge University Press (CUP)
    Publication Date: 2014
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  • 10
    In: Journal of Biogeography, Wiley, Vol. 44, No. 3 ( 2017-03), p. 567-578
    Abstract: Cenozoic dynamics of large‐scale species diversity patterns remain poorly understood, especially for the Western Pacific, in part, because of the paucity of well‐dated fossil records from the tropics. This article aims to reveal the spatiotemporal dynamics of species diversity in the Western Pacific through the Cenozoic, focusing on the tropical Indo‐Australian Archipelago ( IAA ) biodiversity hotspot. Location Tropical and north‐western Pacific Ocean. Methods We analysed well‐preserved fossil ostracodes from the tropical Western Pacific and combined their diversity data with other published data from the region to reconstruct Cenozoic dynamics of species diversity in the tropical and north‐western Pacific Ocean. We fitted generalized additive models to test for differences in richness over time and across geographical regions while accounting for sample‐size variation among samples. Results Low‐, mid‐ and high‐latitude regions all show a similar diversity trajectory: diversity is low in the Eocene and Oligocene, increases from the Early Miocene to the Plio‐Pleistocene but then declines to the present day. Present‐day high biodiversity in these regions was established during the Pliocene with a remarkable diversity increase at that time. Latitudinal diversity patterns are relatively flat and never show a simple decline from the tropics to higher latitudes. Main conclusions Western Pacific Cenozoic ostracodes exhibit a spatiotemporal pattern of species diversity that is inconsistent with the commonly reported and persistent pattern of declining diversity from the tropics to the extratropics. While this inconsistency could be interpreted as evidence that ostracodes are a contrarian clade, Atlantic ostracodes display a standard latitudinal species diversity gradient. Contrasting patterns between oceans suggest an important role for regional factors (e.g. plate tectonics and temporal geomorphological dynamics) in shaping the biodiversity of the Western Pacific.
    Type of Medium: Online Resource
    ISSN: 0305-0270 , 1365-2699
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2017
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    detail.hit.zdb_id: 188963-1
    SSG: 12
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