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  • 1
    In: Biology Open, The Company of Biologists
    Abstract: Digitization of video recordings often requires the laborious procedure of manually clicking points of interest on individual video frames. Here, we present progressive tracking, a procedure that facilitates manual digitization of markerless videos. In contrast to existing software, it allows the user to follow points of interest with a cursor in the progressing video, without the need to click. To compare the performance of progressive tracking with the conventional frame-wise tracking, we quantified speed and accuracy of both methods, testing two different input devices (mouse and stylus pen). We show that progressive tracking can be twice as fast as frame-wise tracking while maintaining accuracy, given that playback speed is controlled. Using a stylus pen can increase frame-wise tracking speed. The complementary application of the progressive and frame-wise mode is exemplified on a realistic video recording. This study reveals that progressive tracking can vastly facilitate video analysis in experimental research.
    Type of Medium: Online Resource
    ISSN: 2046-6390
    Language: English
    Publisher: The Company of Biologists
    Publication Date: 2020
    detail.hit.zdb_id: 2632264-X
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  • 2
    Online Resource
    Online Resource
    Frontiers Media SA ; 2023
    In:  Frontiers in Veterinary Science Vol. 10 ( 2023-3-7)
    In: Frontiers in Veterinary Science, Frontiers Media SA, Vol. 10 ( 2023-3-7)
    Abstract: Locomotor kinematics have been challenging inputs for automated diagnostic screening of livestock. Locomotion is a highly variable behavior, and influenced by subject characteristics (e.g., body mass, size, age, disease). We assemble a set of methods from different scientific disciplines, composing an automatic, high through-put workflow which can disentangle behavioral complexity and generate precise individual indicators of non-normal behavior for application in diagnostics and research. For this study, piglets ( Sus domesticus ) were filmed from lateral perspective during their first 10 h of life, an age at which maturation is quick and body mass and size have major consequences for survival. We then apply deep learning methods for point digitization, calculate joint angle profiles, and apply information-preserving transformations to retrieve a multivariate kinematic data set. We train probabilistic models to infer subject characteristics from kinematics. Model accuracy was validated for strides from piglets of normal birth weight (i.e., the category it was trained on), but the models infer the body mass and size of low birth weight (LBW) piglets (which were left out of training, out-of-sample inference) to be “normal.” The age of some (but not all) low birth weight individuals was underestimated, indicating developmental delay. Such individuals could be identified automatically, inspected, and treated accordingly. This workflow has potential for automatic, precise screening in livestock management.
    Type of Medium: Online Resource
    ISSN: 2297-1769
    Language: Unknown
    Publisher: Frontiers Media SA
    Publication Date: 2023
    detail.hit.zdb_id: 2834243-4
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  • 3
    Online Resource
    Online Resource
    Wiley ; 1989
    In:  Anthropology News Vol. 30, No. 5 ( 1989-05), p. 27-27
    In: Anthropology News, Wiley, Vol. 30, No. 5 ( 1989-05), p. 27-27
    Type of Medium: Online Resource
    ISSN: 1541-6151
    Language: English
    Publisher: Wiley
    Publication Date: 1989
    detail.hit.zdb_id: 2212985-6
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  • 4
    Online Resource
    Online Resource
    Oxford University Press (OUP) ; 2020
    In:  Zoological Journal of the Linnean Society Vol. 189, No. 3 ( 2020-06-27), p. 1067-1083
    In: Zoological Journal of the Linnean Society, Oxford University Press (OUP), Vol. 189, No. 3 ( 2020-06-27), p. 1067-1083
    Abstract: Many phenomena related to motor behaviour in animals are spatially and temporally periodic, making them accessible for transformation to the frequency domain via Fourier Series. Although this has been applied previously, it had not been noticed that the characteristic arrangement of Fourier coefficients in their complex-valued representation resembles landmarks in geometric morphometrics. We define a superimposition procedure in the frequency domain, which removes affine differences (mean, amplitude, phase) to reveal and compare the shape of periodic kinematic measures. This procedure is conceptually linked to dynamic similarity, which can thereby be assessed on the level of individual limb elements. We demonstrate how to make intralimb coordination accessible for large-scale, quantitative analyses. By applying this to a dataset from terrestrial ungulates, dominant patterns in forelimb coordination during walking are identified. This analysis shows that typical strides of these animals differ mostly in how much the limbs are lifted in the presence or absence of obstructive substrate features. This is shown to be independent of morphological features. Besides revealing fundamental characteristics of ungulate locomotion, we argue that the suggested method is generally suitable for the large-scale quantitative assessment of coordination and dynamics in periodic locomotor phenomena.
    Type of Medium: Online Resource
    ISSN: 0024-4082 , 1096-3642
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 2020
    detail.hit.zdb_id: 1471951-4
    SSG: 12
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  • 5
    In: JAMA Neurology, American Medical Association (AMA), Vol. 80, No. 8 ( 2023-08-01), p. 833-
    Abstract: After aneurysmal subarachnoid hemorrhage, the use of lumbar drains has been suggested to decrease the incidence of delayed cerebral ischemia and improve long-term outcome. Objective To determine the effectiveness of early lumbar cerebrospinal fluid drainage added to standard of care in patients after aneurysmal subarachnoid hemorrhage. Design, Setting, and Participants The EARLYDRAIN trial was a pragmatic, multicenter, parallel-group, open-label randomized clinical trial with blinded end point evaluation conducted at 19 centers in Germany, Switzerland, and Canada. The first patient entered January 31, 2011, and the last on January 24, 2016, after 307 randomizations. Follow-up was completed July 2016. Query and retrieval of data on missing items in the case report forms was completed in September 2020. A total of 20 randomizations were invalid, the main reason being lack of informed consent. No participants meeting all inclusion and exclusion criteria were excluded from the intention-to-treat analysis. Exclusion of patients was only performed in per-protocol sensitivity analysis. A total of 287 adult patients with acute aneurysmal subarachnoid hemorrhage of all clinical grades were analyzable. Aneurysm treatment with clipping or coiling was performed within 48 hours. Intervention A total of 144 patients were randomized to receive an additional lumbar drain after aneurysm treatment and 143 patients to standard of care only. Early lumbar drainage with 5 mL per hour was started within 72 hours of the subarachnoid hemorrhage. Main Outcomes and Measures Primary outcome was the rate of unfavorable outcome, defined as modified Rankin Scale score of 3 to 6 (range, 0 to 6), obtained by masked assessors 6 months after hemorrhage. Results Of 287 included patients, 197 (68.6%) were female, and the median (IQR) age was 55 (48-63) years. Lumbar drainage started at a median (IQR) of day 2 (1-2) after aneurysmal subarachnoid hemorrhage. At 6 months, 47 patients (32.6%) in the lumbar drain group and 64 patients (44.8%) in the standard of care group had an unfavorable neurological outcome (risk ratio, 0.73; 95% CI, 0.52 to 0.98; absolute risk difference, −0.12; 95% CI, −0.23 to −0.01; P  = .04). Patients treated with a lumbar drain had fewer secondary infarctions at discharge (41 patients [28.5%] vs 57 patients [39.9%] ; risk ratio, 0.71; 95% CI, 0.49 to 0.99; absolute risk difference, −0.11; 95% CI, −0.22 to 0; P  = .04). Conclusion and Relevance In this trial, prophylactic lumbar drainage after aneurysmal subarachnoid hemorrhage lessened the burden of secondary infarction and decreased the rate of unfavorable outcome at 6 months. These findings support the use of lumbar drains after aneurysmal subarachnoid hemorrhage. Trial Registration ClinicalTrials.gov Identifier: NCT01258257
    Type of Medium: Online Resource
    ISSN: 2168-6149
    Language: English
    Publisher: American Medical Association (AMA)
    Publication Date: 2023
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  • 6
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2018
    In:  Evolutionary Biology Vol. 45, No. 4 ( 2018-12), p. 449-461
    In: Evolutionary Biology, Springer Science and Business Media LLC, Vol. 45, No. 4 ( 2018-12), p. 449-461
    Type of Medium: Online Resource
    ISSN: 0071-3260 , 1934-2845
    RVK:
    RVK:
    RVK:
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2018
    detail.hit.zdb_id: 2375126-5
    SSG: 12
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  • 7
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2020
    In:  International Journal of Behavioral Nutrition and Physical Activity Vol. 17, No. 1 ( 2020-12)
    In: International Journal of Behavioral Nutrition and Physical Activity, Springer Science and Business Media LLC, Vol. 17, No. 1 ( 2020-12)
    Abstract: Prolonged sitting time is a risk factor for chronic disease, yet recent global surveillance is not well described. The aims were to clarify: (i) the countries that have collected country-level data on self-reported sitting time; (ii) the single-item tools used to collect these data; and (iii) the duration of sitting time reported across low- to high-income countries. Methods Country-level data collected within the last 10 years using single-item self-report were included. The six-stage methodology: (1) reviewing Global Observatory for Physical Activity! Country Cards; (2–4) country-specific searches of PubMed, the Demographic and Health Survey website and Google; (5) analysing the Eurobarometer 88.4; and (6) country-specific searches for World Health Organization STEPwise reports. Results A total of 7641 records were identified and screened for eligibility. Sixty-two countries (29%) reported sitting time representing 47% of the global adult population. The majority of data were from high-income (61%) and middle income (29%) countries. The tools used were the International Physical Activity Questionnaire (IPAQ; n  = 34), a modified IPAQ ( n  = 1) or the Global Physical Activity Questionnaire (GPAQ; n  = 27). The median of mean daily sitting times was 4.7 (IQR: 3.5–5.1) hours across all countries. Higher-income countries recorded a longer duration of sitting time than lower-income countries (4.9 vs 2.7 h). Conclusions This study provides an updated collation of countries collecting self-reported sitting time data. The daily sitting time findings should be interpreted cautiously. Current surveillance of sitting time is limited by a lack of coverage. Measures of population sitting time that are valid, feasible and sensitive to change should be embedded within global surveillance systems, to help guide future policy, research and practice. Trial registration Not applicable.
    Type of Medium: Online Resource
    ISSN: 1479-5868
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2020
    detail.hit.zdb_id: 2134691-4
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  • 8
    In: Zoology, Elsevier BV, Vol. 129 ( 2018-08), p. 35-44
    Type of Medium: Online Resource
    ISSN: 0944-2006
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2018
    detail.hit.zdb_id: 2051297-1
    SSG: 12
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  • 9
    Online Resource
    Online Resource
    Oxford University Press (OUP) ; 2023
    In:  Integrative And Comparative Biology Vol. 63, No. 3 ( 2023-09-15), p. 610-624
    In: Integrative And Comparative Biology, Oxford University Press (OUP), Vol. 63, No. 3 ( 2023-09-15), p. 610-624
    Abstract: Intrauterine undernutrition in humans typically results in low birth weight ([small for gestational age] SGA) and delayed postnatal neuromotor maturation. Since SGA and intrauterine growth retardation are also common in domestic pigs, piglets are premised as models to study delayed motor development. Applied to the locomotor paradigm, however, questions emerge: (i) how to map the developmental time scale of the precocial model onto the altricial target species and (ii) how to distinguish size from maturation effects? Gait data were collected at self-selected voluntary walking speed during early development (0–96 hours postpartum; pp) for SGA- and normal ([appropriate for gestational age] AGA) piglets. Dimensionless spatiotemporal gait characteristics (according to dynamic similarity) become invariant already after 4 hours pp, suggesting rapid postnatal neuromotor maturation. Moreover, dimensionless gait data are largely identical for SGA- and AGA-siblings, indicating that primarily size effects explain absolute locomotor differences. This is further supported by (i) normalized force-generating capacity of limb muscles, (ii) joint kinematics ( & lt;10 hours pp), and (iii) normalized ground reaction forces ( & lt;5 days pp) being indifferent between SGA- and AGA- piglets. Furthermore, predictive modeling based on limb joint kinematics is unable to discern the majority of SGA- from AGA-piglets ( & lt;10 hours pp). All this leads to the conclusion that, although smaller than the AGA piglets in absolute terms, SGA-piglets mature (neuromechanically speaking) just like, and equally fast as their AGA littermates. Yet, it remains a fact that early SGA piglets are reported to be less mobile, less vital, and less competitive than their AGA siblings (even often die before day 3 pp). This conspicuous difference likely results from the energy level (blood glucose and glycogen) and its mobilization being considerably different between the piglet categories during early development.
    Type of Medium: Online Resource
    ISSN: 1540-7063 , 1557-7023
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 2023
    detail.hit.zdb_id: 2159110-6
    SSG: 12
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  • 10
    Online Resource
    Online Resource
    eLife Sciences Publications, Ltd ; 2014
    In:  eLife Vol. 3 ( 2014-12-08)
    In: eLife, eLife Sciences Publications, Ltd, Vol. 3 ( 2014-12-08)
    Abstract: Rats are highly social creatures, preferring to live in large groups within an established hierarchy. Social interactions range from play, mating, and parental care to displays of aggression and dominance and involve the use of odors, touch, and vocal calls. Touch typically takes the form of snout-to-snout contact, while most vocalizations are ultrasonic, with calls of different frequencies used to signal alarm or pleasure. To date, most studies of rat vocalizations have involved playback of recorded calls to anaesthetized animals, and relatively little is known about how freely moving rats respond to calls. Rao et al. have now addressed this question by recording video footage of rats interacting with other animals or with objects and then using electrodes to record signals in the brains of these rats. The video footage revealed that rats produce more vocal calls during social interactions than they do during non-social interactions. Moreover, bursts of calls appear to signal the beginning and end of bouts of snout-to-snout contact, suggesting that rodent communication involves the coordinated use of both tactile and vocal cues. Surprisingly, electrode recordings from the part of the brain that responds to sound—the auditory cortex—revealed that most neurons in this region did not respond to ultrasonic calls. However, a type of neuron called a fast-spiking neuron did respond strongly to these calls. The work of Rao et al. shows that information from multiple senses is directly combined early in the processing of sensory information. Exactly why tactile stimuli should inhibit the auditory cortex is not clear, but there is some evidence that this may increase the rat's sensitivity to sounds. Further experiments are required to test this possibility and to determine how integrating information from multiple senses affects rodent behavior. This will help us to understand how the brain generates coherent social behaviour from signals arriving through distinct sensory channels.
    Type of Medium: Online Resource
    ISSN: 2050-084X
    Language: English
    Publisher: eLife Sciences Publications, Ltd
    Publication Date: 2014
    detail.hit.zdb_id: 2687154-3
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