GLORIA

GEOMAR Library Ocean Research Information Access

Your email was sent successfully. Check your inbox.

An error occurred while sending the email. Please try again.

Proceed reservation?

Export
Filter
Material
Language
  • 1
    In: Nature Materials, Springer Science and Business Media LLC, Vol. 21, No. 10 ( 2022-10), p. 1191-1199
    Type of Medium: Online Resource
    ISSN: 1476-1122 , 1476-4660
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2022
    detail.hit.zdb_id: 2088679-2
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 2
    In: Development, The Company of Biologists, Vol. 146, No. 19 ( 2019-10-01)
    Abstract: Over the past few years, interest in chromatin and its evolution has grown. To further advance these interests, we organized a workshop with the support of The Company of Biologists to debate the current state of knowledge regarding the origin and evolution of chromatin. This workshop led to prospective views on the development of a new field of research that we term ‘EvoChromo’. In this short Spotlight article, we define the breadth and expected impact of this new area of scientific inquiry on our understanding of both chromatin and evolution.
    Type of Medium: Online Resource
    ISSN: 1477-9129 , 0950-1991
    Language: English
    Publisher: The Company of Biologists
    Publication Date: 2019
    detail.hit.zdb_id: 2007916-3
    SSG: 12
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 3
    Online Resource
    Online Resource
    American Association for the Advancement of Science (AAAS) ; 2008
    In:  Science Vol. 321, No. 5892 ( 2008-08-22), p. 1086-1088
    In: Science, American Association for the Advancement of Science (AAAS), Vol. 321, No. 5892 ( 2008-08-22), p. 1086-1088
    Abstract: Adenovirus e1a induces quiescent human cells to replicate. We found that e1a causes global relocalization of the RB (retinoblastoma) proteins (RB, p130, and p107) and p300/CBP histone acetyltransferases on promoters, the effect of which is to restrict the acetylation of histone 3 lysine-18 (H3K18ac) to a limited set of genes, thereby stimulating cell cycling and inhibiting antiviral responses and cellular differentiation. Soon after expression, e1a binds transiently to promoters of cell cycle and growth genes, causing enrichment of p300/CBP, PCAF (p300/CBP-associated factor), and H3K18ac; depletion of RB proteins; and transcriptional activation. e1a also associates transiently with promoters of antiviral genes, causing enrichment for RB, p130, and H4K16ac; increased nucleosome density; and transcriptional repression. At later times, e1a and p107 bind mainly to promoters of development and differentiation genes, repressing transcription. The temporal order of e1a binding requires its interactions with p300/CBP and RB proteins. Our data uncover a defined epigenetic reprogramming leading to cellular transformation.
    Type of Medium: Online Resource
    ISSN: 0036-8075 , 1095-9203
    RVK:
    RVK:
    Language: English
    Publisher: American Association for the Advancement of Science (AAAS)
    Publication Date: 2008
    detail.hit.zdb_id: 128410-1
    detail.hit.zdb_id: 2066996-3
    detail.hit.zdb_id: 2060783-0
    SSG: 11
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 4
    Online Resource
    Online Resource
    American Association for the Advancement of Science (AAAS) ; 2002
    In:  Science Vol. 298, No. 5597 ( 2002-11-15), p. 1412-1414
    In: Science, American Association for the Advancement of Science (AAAS), Vol. 298, No. 5597 ( 2002-11-15), p. 1412-1414
    Abstract: Histone deacetylases, typified by class I Rpd3 in the yeast Saccharomyces cerevisiae , have historically been associated with gene repression. We now demonstrate that Hos2, another member of the class I family, binds to the coding regions of genes primarily during gene activation, when it specifically deacetylates the lysines in H3 and H4 histone tails. Moreover, Hos2 is preferentially associated with genes of high activity genome-wide. We also show that Hos2 and an associated factor, Set3, are necessary for efficient transcription. Therefore, our data indicate that, in contrast to other class I histone deacetylases, Hos2 is directly required for gene activation.
    Type of Medium: Online Resource
    ISSN: 0036-8075 , 1095-9203
    RVK:
    RVK:
    Language: English
    Publisher: American Association for the Advancement of Science (AAAS)
    Publication Date: 2002
    detail.hit.zdb_id: 128410-1
    detail.hit.zdb_id: 2066996-3
    detail.hit.zdb_id: 2060783-0
    SSG: 11
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 5
    In: Blood, American Society of Hematology, Vol. 118, No. 21 ( 2011-11-18), p. 2362-2362
    Abstract: Abstract 2362 The endothelium in embryonic and extraembryonic hematopoietic tissues has the capacity to generate hematopoietic stem and progenitor cells (HS/PC). However, it is unknown how this unique endothelium is specified. Microarray analysis of endothelial cells from hematopoietic tissues of embryos deficient for the bHLH transcription factor Scl/tal1 revealed that Scl establishes a robust hematopoietic transcriptional program in the endothelium. Surprisingly, lack of Scl also induced an unexpected fate switching of the prospective hemogenic endothelium to the cardiac lineage. Scl deficient embryos displayed a dramatic upregulation of cardiac transcription factors and structural proteins within the yolk sac vasculature, resulting in the generation of spontaneously beating cardiomyocytes. Ectopic cardiac potential in Scl deficient embryos arose from endothelial-derived CD31+Pdgfrα+ cardiogenic progenitor cells (CPCs), which were present in all sites of HS/PC generation. Analysis of Runx1-deficient embryos revealed, that although Runx1 acts downstream of Scl during the emergence of definitive HS/PCs, it is not required for the suppression of the cardiac fate in the endothelium. The only wild type tissue that contained CD31+Pdgfrα+ putative CPCs was the heart, and this population was greatly expanded in Scl deficient embryos. Strikingly, endocardium in Scl−/− hearts also activated a robust cardiomyogenic transcriptional program and generated Troponin T+ cardiomyocytes both in vivo and in vitro. Although CD31+Pdgfrα+ CPCs from wild type hearts did not generate readily beating cells in culture, they produced cells expressing endothelial, smooth muscle and cardiomyocyte specific genes, implying multipotentiality of this novel CPC population. Furthermore, CD31+Pdgfrα+ CPCs were greatly reduced in Isl1−/− hearts, which fail to generate functional, multipotential CPCs. Lineage tracing using VE-cadherin Cre Rosa-YFP mouse strain demonstrated that, in addition to generating HS/PCs in hematopoietic tissues, endothelial cells are also the cell of origin for CD31+Pdgfrα+ CPCs in the heart. Together, these data suggest a broader role for embryonic endothelium as a potential source of tissue-specific stem and progenitor cells and implicate Scl/tal1 as an important regulator of endothelial fate choice. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2011
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 6
    In: Blood, American Society of Hematology, Vol. 120, No. 21 ( 2012-11-16), p. 3446-3446
    Abstract: Abstract 3446 Understanding the mechanisms of mesoderm specification into the different lineages during embryogenesis holds a great potential to advance the development of cell-based regenerative therapies for cardiovascular and blood disorders. The divergence of the developmental fates is dictated by transcription factors that induce lineage-specific gene expression programs. The basic helix-loop-helix transcription factor Scl is known as the master regulator for the specification of the hematopoietic fate. We recently discovered that, in addition to positive effects of Scl in promoting the establishment of hemogenic endothelium and hematopoietic stem/progenitor cells development, it is also required to repress cardiogenesis in hematopoietic tissues during developmentally defined window (Van Handel, Montel-Hagen, et al, Cell, 2012). However, how Scl regulates hematopoiesis and cardiogenesis remains unknown. To identify Scl's direct target genes during mesoderm diversification, we determined the genome-wide Scl binding sites in Flk+ mesoderm from embryoid bodies using ChIP-sequencing. This analysis identified ∼4600 Scl binding sites throughout the genome, with predominance in inter-genic regions. Comparison with previously published Scl ChIP-seq datasets during later stages of development (HPC7 hematopoietic progenitor cell-line, Wilson et al. 2010, and red blood cells from fetal liver, Kassouf et al. 2010) revealed that the majority of the binding sites are developmental stage specific. Using nearest gene approach to intersect ChIP-seq data with gene expression data showed that the regulating regions of about 35% of Scl activated and 20% of repressed genes in Flk+ mesoderm were bound by Scl. Similar to later stages of hematopoietic development, robust binding of Scl to key hematopoietic transcription factors downstream of Scl, such as Runx1, Gata1, Gata2, Lyl1, Eto2, Erg, Fli1, Hhex, Gfi1, Gfi1b and Myb was observed during mesoderm specification. Interestingly, genomic regions enrichment analysis of Scl binding sites unique to Flk+ mesoderm showed enrichment for genes implicated in mesoderm formation and heart development, such as Gata4, Gata6, Msx1, Myocd, Nkx2–5 and Tbx5 indicating Scl functions as a direct repressor for cardiogenic transcriptional program. We then went on to investigate the mechanism of how Scl distinguishes between cardiac and hematopoietic genes to repress or activate them. Previous studies have shown that Scl forms complex with Gata1/2 transcription factors to activate red cell transcriptional program in erythroid cells. To clarify whether Gata1/2 are required in Scl binding and functional distinction between activation and repression during mesoderm specification, we performed Scl ChIP sequencing on Flk+ mesoderm from embryoid bodies induced from Gata1/2 double KO ES cells. Unexpectedly, Scl still bound to most hematopoietic as well as cardiac sites. However, some specific binding sites around key hematopoietic genes were completely lost or significantly reduced, such as ∼+300kb Runx1, ∼+30kb Myb and ∼TSS of Pu.1, and the expression of these genes was also down regulated in agreement with the loss of CD41+ hematopoietic progenitors in Day4.5 embryonic bodies. This suggests that Gata1/2 are required for Scl binding to the regulatory regions of a subset of crucial hematopoietic genes. These studies show that Scl has a direct critical function both as an activator of hematopoietic fate and a repressor of cardiac fate during mesoderm diversification, and only a fraction of Scl binding sites are Gata1 and/or Gata2 dependent. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2012
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 7
    In: Blood, American Society of Hematology, Vol. 114, No. 22 ( 2009-11-20), p. 1504-1504
    Abstract: Abstract 1504 Poster Board I-527 The hematopoietic program is initiated in the embryo by the basic helix-loop-helix (bHLH) transcription factor Scl/Tal1 (stem cell leukemia gene). In the absence of Scl, mesodermal precursors are unable to commit to the hematopoietic fate and the embryo dies due to lack of blood formation. However, Scl becomes dispensable for hematopoietic stem cell(HSC) function shortly after hematopoietic specification, suggesting that once specified by Scl, the hematopoietic fate is maintained by alternative regulatory mechanisms. Scl is required again later for the proper maturation of erythrocytes and megakaryocytes. Despite Scl's pivotal role in initiating hematopoiesis, how Scl dictates HSC development at a molecular level remains unknown. To define how the hematopoietic fate is established by Scl, we performed genome-wide gene expression and ChIP-chip Scl binding analysis on in vitro differentiated hemangioblasts isolated from Scl−/− and control ES cells. Analysis of the 655 Scl-dependent genes and Scl binding revealed that Scl acts both as an activator and a repressor. The group of genes activated by Scl included major hematopoietic transcription factors such as Tel/Etv6, Gfi1, Fli1, cMyb, Gata2, Hhex, Sox17, Lyl1, and JunB, as well as regulators of embryonic vasculogenesis/angiogenesis and/or arterio-venous specification such as Ets1, Ets2, Elk3, Foxo1, Hoxb5, Smarca2, and Sox18. The group of genes repressed by Scl included regulators of alternative mesodermal fates such as Gata4, Tbx20 and Isl1, Foxf1a, and Snail1. These data show that Scl induces the hematopoietic program both by directly activating the major transcriptional networks required for the formation of the hemogenic endothelium and the emergence, self-renewal and survival of HSCs, as well as repressing alternative mesodermal fates. Considering the large number of transcription factors that Scl regulates during specification, we sought to determine at the molecular level how the hematopoietic fate is maintained independently of Scl. Gene expression analysis on Lin−cKit+ HSCs/progenitors isolated from Sclfl/flVavCre+ mice revealed that only 41 genes were Scl dependent, none of which were major hematopoietic factors. Notably, the key hematopoietic transcription factors remained expressed in both control and Scl deficient HSCs/progenitors indicating that the Scl induced program is maintained. Regulators of alternative mesodermal fates remained silenced during adult hematopoiesis. These molecular data were in agreement with the functional data showing that the bone marrow HSC/progenitor pool is maintained stably in the absence of Scl. To test whether Lyl1, a bHLH family member and Scl target gene, has an active role in maintaining the Scl induced hematopoietic fate, we generated HSCs/progenitors that do not express either Scl, or Lyl1, or both, by knocking down Lyl1 in Scl-deficient and control HSCs/progenitors via lentiviral shRNA. Analysis of colony forming capacity of transduced Lin−cKit+ HSCs/progenitors revealed that removing either Lyl1 or Scl alone did not have major impact on the clonogenic progenitor pool, whereas loss of both Lyl1 and Scl abrogated colony formation completely. Furthermore, ChIP-chip data revealed that Lyl1 is recruited to the promoters of the majority of Scl's target genes, and can maintain the hematopoietic program in the absence of Scl. In summary, these data show that Scl is critical in inducing the major transcriptional network of HSC genes while repressing alternative mesodermal fates during hematopoietic specification, after which the program is stabilized by Scl's target gene Lyl1. During adult hematopoiesis, relative redundancy between Scl and Lyl1 ensures stability of the HSC fate, while both factors retain unique functions in lineage differentiation. Disclosures: No relevant conflicts of interest to declare.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2009
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 8
    In: Nature, Springer Science and Business Media LLC, Vol. 576, No. 7786 ( 2019-12-12), p. 281-286
    Type of Medium: Online Resource
    ISSN: 0028-0836 , 1476-4687
    RVK:
    RVK:
    RVK:
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2019
    detail.hit.zdb_id: 120714-3
    detail.hit.zdb_id: 1413423-8
    SSG: 11
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 9
    In: The EMBO Journal, EMBO, Vol. 34, No. 6 ( 2015-03-12), p. 759-777
    Abstract: image Previous work had revealed that Scl promotes hemogenic competence while repressing cardiac fate. Comprehensive genome‐scale data presented here establish Scl‐mediated ‘enhancer decommissioning’ as underlying molecular mechanism. Scl binds to hematopoietic and cardiac enhancers that have been epigenetically primed in multipotent cardiovascular mesoderm. Scl‐regulated cardiac enhancers become decommissioned in blood cells by loss of active histone marks. A subset of Scl‐bound enhancers can also be regulated by cardiac Gata and bHLH factors. Hematopoietic Gata factors are required for Scl‐dependent gene activation but not repression.
    Type of Medium: Online Resource
    ISSN: 0261-4189 , 1460-2075
    RVK:
    Language: English
    Publisher: EMBO
    Publication Date: 2015
    detail.hit.zdb_id: 1467419-1
    detail.hit.zdb_id: 586044-1
    SSG: 12
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 10
    In: Science, American Association for the Advancement of Science (AAAS), Vol. 369, No. 6499 ( 2020-07-03), p. 59-64
    Abstract: Eukaryotic histone H3-H4 tetramers contain a putative copper (Cu 2+ ) binding site at the H3-H3′ dimerization interface with unknown function. The coincident emergence of eukaryotes with global oxygenation, which challenged cellular copper utilization, raised the possibility that histones may function in cellular copper homeostasis. We report that the recombinant Xenopus laevis H3-H4 tetramer is an oxidoreductase enzyme that binds Cu 2+ and catalyzes its reduction to Cu 1+ in vitro. Loss- and gain-of-function mutations of the putative active site residues correspondingly altered copper binding and the enzymatic activity, as well as intracellular Cu 1+ abundance and copper-dependent mitochondrial respiration and Sod1 function in the yeast Saccharomyces cerevisiae . The histone H3-H4 tetramer, therefore, has a role other than chromatin compaction or epigenetic regulation and generates biousable Cu 1+ ions in eukaryotes.
    Type of Medium: Online Resource
    ISSN: 0036-8075 , 1095-9203
    RVK:
    RVK:
    Language: English
    Publisher: American Association for the Advancement of Science (AAAS)
    Publication Date: 2020
    detail.hit.zdb_id: 128410-1
    detail.hit.zdb_id: 2066996-3
    detail.hit.zdb_id: 2060783-0
    SSG: 11
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
Close ⊗
This website uses cookies and the analysis tool Matomo. More information can be found here...