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  • 1
    Online Resource
    Online Resource
    Wiley ; 2004
    In:  Concurrency and Computation: Practice and Experience Vol. 16, No. 2-3 ( 2004-02), p. 293-302
    In: Concurrency and Computation: Practice and Experience, Wiley, Vol. 16, No. 2-3 ( 2004-02), p. 293-302
    Abstract: Sophisticated parallel languages are difficult to develop; most parallel distributed memory scientific applications are developed using a serial language, expressing parallelism through third party libraries (e.g. MPI). As a result, frameworks and libraries are often used to encapsulate significant complexities. We define a novel approach to optimize the use of libraries within applications. The resulting tool, named ROSE, leverages the additional semantics provided by library‐defined abstractions enabling library specific optimization of application codes. It is a common perception that performance is inversely proportional to the level of abstraction. Our work shows that this is not the case if the additional semantics can be leveraged. We show how ROSE can be used to leverage the semantics within the compile‐time optimization. Copyright © 2004 John Wiley & Sons, Ltd.
    Type of Medium: Online Resource
    ISSN: 1532-0626 , 1532-0634
    URL: Issue
    RVK:
    Language: English
    Publisher: Wiley
    Publication Date: 2004
    detail.hit.zdb_id: 2052606-4
    SSG: 11
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  • 2
    Online Resource
    Online Resource
    Hindawi Limited ; 2019
    In:  International Journal of Biomedical Imaging Vol. 2019 ( 2019-09-05), p. 1-21
    In: International Journal of Biomedical Imaging, Hindawi Limited, Vol. 2019 ( 2019-09-05), p. 1-21
    Abstract: For complex segmentation tasks, the achievable accuracy of fully automated systems is inherently limited. Specifically, when a precise segmentation result is desired for a small amount of given data sets, semi-automatic methods exhibit a clear benefit for the user. The optimization of human computer interaction (HCI) is an essential part of interactive image segmentation. Nevertheless, publications introducing novel interactive segmentation systems (ISS) often lack an objective comparison of HCI aspects. It is demonstrated that even when the underlying segmentation algorithm is the same throughout interactive prototypes, their user experience may vary substantially. As a result, users prefer simple interfaces as well as a considerable degree of freedom to control each iterative step of the segmentation. In this article, an objective method for the comparison of ISS is proposed, based on extensive user studies. A summative qualitative content analysis is conducted via abstraction of visual and verbal feedback given by the participants. A direct assessment of the segmentation system is executed by the users via the system usability scale (SUS) and AttrakDiff-2 questionnaires. Furthermore, an approximation of the findings regarding usability aspects in those studies is introduced, conducted solely from the system-measurable user actions during their usage of interactive segmentation prototypes. The prediction of all questionnaire results has an average relative error of 8.9%, which is close to the expected precision of the questionnaire results themselves. This automated evaluation scheme may significantly reduce the resources necessary to investigate each variation of a prototype’s user interface (UI) features and segmentation methodologies.
    Type of Medium: Online Resource
    ISSN: 1687-4188 , 1687-4196
    Language: English
    Publisher: Hindawi Limited
    Publication Date: 2019
    detail.hit.zdb_id: 2196721-0
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  • 3
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2021
    In:  International Journal of Computer Assisted Radiology and Surgery Vol. 16, No. 1 ( 2021-01), p. 1-10
    In: International Journal of Computer Assisted Radiology and Surgery, Springer Science and Business Media LLC, Vol. 16, No. 1 ( 2021-01), p. 1-10
    Abstract: As the spectrum of X-ray procedures has increased both for diagnostic and for interventional cases, more attention is paid to X-ray dose management. While the medical benefit to the patient outweighs the risk of radiation injuries in almost all cases, reproducible studies on organ dose values help to plan preventive measures helping both patient as well as staff. Dose studies are either carried out retrospectively, experimentally using anthropomorphic phantoms, or computationally. When performed experimentally, it is helpful to combine them with simulations validating the measurements. In this paper, we show how such a dose simulation method, carried out together with actual X-ray experiments, can be realized to obtain reliable organ dose values efficiently. Methods A Monte Carlo simulation technique was developed combining down-sampling and super-resolution techniques for accelerated processing accompanying X-ray dose measurements. The target volume is down-sampled using the statistical mode first. The estimated dose distribution is then up-sampled using guided filtering and the high-resolution target volume as guidance image. Second, we present a comparison of dose estimates calculated with our Monte Carlo code experimentally obtained values for an anthropomorphic phantom using metal oxide semiconductor field effect transistor dosimeters. Results We reconstructed high-resolution dose distributions from coarse ones (down-sampling factor 2 to 16) with error rates ranging from 1.62 % to 4.91 %. Using down-sampled target volumes further reduced the computation time by 30 % to 60 %. Comparison of measured results to simulated dose values demonstrated high agreement with an average percentage error of under $$10 \%$$ 10 % for all measurement points. Conclusions Our results indicate that Monte Carlo methods can be accelerated hardware-independently and still yield reliable results. This facilitates empirical dose studies that make use of online Monte Carlo simulations to easily cross-validate dose estimates on-site.
    Type of Medium: Online Resource
    ISSN: 1861-6410 , 1861-6429
    RVK:
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2021
    detail.hit.zdb_id: 2235881-X
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  • 4
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2018
    In:  International Journal of Computer Assisted Radiology and Surgery Vol. 13, No. 6 ( 2018-6), p. 847-854
    In: International Journal of Computer Assisted Radiology and Surgery, Springer Science and Business Media LLC, Vol. 13, No. 6 ( 2018-6), p. 847-854
    Type of Medium: Online Resource
    ISSN: 1861-6410 , 1861-6429
    RVK:
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2018
    detail.hit.zdb_id: 2235881-X
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  • 5
    Online Resource
    Online Resource
    Institute of Electrical and Electronics Engineers (IEEE) ; 2018
    In:  IEEE Transactions on Radiation and Plasma Medical Sciences Vol. 2, No. 3 ( 2018-5), p. 194-204
    In: IEEE Transactions on Radiation and Plasma Medical Sciences, Institute of Electrical and Electronics Engineers (IEEE), Vol. 2, No. 3 ( 2018-5), p. 194-204
    Type of Medium: Online Resource
    ISSN: 2469-7311 , 2469-7303
    Language: Unknown
    Publisher: Institute of Electrical and Electronics Engineers (IEEE)
    Publication Date: 2018
    detail.hit.zdb_id: 2867672-5
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  • 6
    Online Resource
    Online Resource
    World Scientific Pub Co Pte Ltd ; 2003
    In:  Parallel Processing Letters Vol. 13, No. 04 ( 2003-12), p. 549-560
    In: Parallel Processing Letters, World Scientific Pub Co Pte Ltd, Vol. 13, No. 04 ( 2003-12), p. 549-560
    Abstract: When designing and implementing highly efficient scientific applications for parallel computers such as clusters of workstations, it is inevitable to consider and to optimize the single-CPU performance of the codes. For this purpose, it is particularly important that the codes respect the hierarchical memory designs that computer architects employ in order to hide the effects of the growing gap between CPU performance and main memory speed. In this article, we present techniques to enhance the single-CPU efficiency of lattice Boltzmann methods which are commonly used in computational fluid dynamics. We show various performance results for both 2D and 3D codes in order to emphasize the effectiveness of our optimization techniques.
    Type of Medium: Online Resource
    ISSN: 0129-6264 , 1793-642X
    Language: English
    Publisher: World Scientific Pub Co Pte Ltd
    Publication Date: 2003
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  • 7
    Online Resource
    Online Resource
    Institute of Electrical and Electronics Engineers (IEEE) ; 2014
    In:  IEEE Transactions on Medical Imaging Vol. 33, No. 9 ( 2014-9), p. 1788-1802
    In: IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers (IEEE), Vol. 33, No. 9 ( 2014-9), p. 1788-1802
    Type of Medium: Online Resource
    ISSN: 0278-0062 , 1558-254X
    RVK:
    Language: Unknown
    Publisher: Institute of Electrical and Electronics Engineers (IEEE)
    Publication Date: 2014
    detail.hit.zdb_id: 2068206-2
    detail.hit.zdb_id: 622531-7
    SSG: 12
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  • 8
    Online Resource
    Online Resource
    Hindawi Limited ; 2012
    In:  Computational and Mathematical Methods in Medicine Vol. 2012 ( 2012), p. 1-24
    In: Computational and Mathematical Methods in Medicine, Hindawi Limited, Vol. 2012 ( 2012), p. 1-24
    Abstract: Increasing interest is drawn on hemodynamic parameters for classifying the risk of rupture as well as treatment planning of cerebral aneurysms. A proposed method to obtain quantities such as wall shear stress, pressure, and blood flow velocity is to numerically simulate the blood flow using computational fluid dynamics (CFD) methods. For the validation of those calculated quantities, virtually generated angiograms, based on the CFD results, are increasingly used for a subsequent comparison with real, acquired angiograms. For the generation of virtual angiograms, several patient-specific parameters have to be incorporated to obtain virtual angiograms which match the acquired angiograms as best as possible. For this purpose, a workflow is presented and demonstrated involving multiple phantom and patient cases.
    Type of Medium: Online Resource
    ISSN: 1748-670X , 1748-6718
    Language: English
    Publisher: Hindawi Limited
    Publication Date: 2012
    detail.hit.zdb_id: 2256917-0
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  • 9
    In: Medical Physics, Wiley, Vol. 46, No. 2 ( 2019-02), p. 689-703
    Abstract: Benefiting from multi‐energy x‐ray imaging technology, material decomposition facilitates the characterization of different materials in x‐ray imaging. However, the performance of material decomposition is limited by the accuracy of the decomposition model. Due to the presence of nonideal effects in x‐ray imaging systems, it is difficult to explicitly build the imaging system models for material decomposition. As an alternative, this paper explores the feasibility of using machine learning approaches for material decomposition tasks. Methods In this work, we propose a learning‐based pipeline to perform material decomposition. In this pipeline, the step of feature extraction is implemented to integrate more informative features, such as neighboring information, to facilitate material decomposition tasks, and the step of hold‐out validation with continuous interleaved sampling is employed to perform model evaluation and selection. We demonstrate the material decomposition capability of our proposed pipeline with promising machine learning algorithms in both simulation and experimentation, the algorithms of which are artificial neural network (ANN), Random Tree, REPTree and Random Forest. The performance was quantitatively evaluated using a simulated XCAT phantom and an anthropomorphic torso phantom. In order to evaluate the proposed method, two measurement‐based material decomposition methods were used as the reference methods for comparison studies. In addition, deep learning‐based solutions were also investigated to complete this work as a comprehensive comparison of machine learning solution for material decomposition. Results In both the simulation study and the experimental study, the introduced machine learning algorithms are able to train models for the material decomposition tasks. With the application of neighboring information, the performance of each machine learning algorithm is strongly improved. Compared to the state‐of‐the‐art method, the performance of ANN in the simulation study is an improvement of over 24% in the noiseless scenarios and over 169% in the noisy scenario, while the performance of the Random Forest is an improvement of over 40% and 165%, respectively. Similarly, the performance of ANN in the experimental study is an improvement of over 42% in the denoised scenario and over 45% in the original scenario, while the performance of Random Forest is an improvement by over 33% and 40%, respectively. Conclusions The proposed pipeline is able to build generic material decomposition models for different scenarios, and it was validated by quantitative evaluation in both simulation and experimentation. Compared to the reference methods, appropriate features and machine learning algorithms can significantly improve material decomposition performance. The results indicate that it is feasible and promising to perform material decomposition using machine learning methods, and our study will facilitate future efforts toward clinical applications.
    Type of Medium: Online Resource
    ISSN: 0094-2405 , 2473-4209
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2019
    detail.hit.zdb_id: 1466421-5
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  • 10
    In: Diagnostics, MDPI AG, Vol. 13, No. 4 ( 2023-02-14), p. 712-
    Abstract: Background and purpose: Based on artificial intelligence (AI), 3D angiography (3DA) is a novel postprocessing algorithm for “DSA-like” 3D imaging of cerebral vasculature. Because 3DA requires neither mask runs nor digital subtraction as the current standard 3D-DSA does, it has the potential to cut the patient dose by 50%. The object was to evaluate 3DA’s diagnostic value for visualization of intracranial artery stenoses (IAS) compared to 3D-DSA. Materials and methods: 3D-DSA datasets of IAS (nIAS = 10) were postprocessed using conventional and prototype software (Siemens Healthineers AG, Erlangen, Germany). Matching reconstructions were assessed by two experienced neuroradiologists in consensus reading, considering image quality (IQ), vessel diameters (VD1/2), vessel-geometry index (VGI = VD1/VD2), and specific qualitative/quantitative parameters of IAS (e.g., location, visual IAS grading [low-/medium-/high-grade] and intra-/poststenotic diameters [dintra-/poststenotic in mm] ). Using the NASCET criteria, the percentual degree of luminal restriction was calculated. Results: In total, 20 angiographic 3D volumes (n3DA = 10; n3D-DSA = 10) were successfully reconstructed with equivalent IQ. Assessment of the vessel geometry in 3DA datasets did not differ significantly from 3D-DSA (VD1: r = 0.994, p = 0.0001; VD2:r = 0.994, p = 0.0001; VGI: r = 0.899, p = 0.0001). Qualitative analysis of IAS location (3DA/3D-DSA:nICA/C4 = 1, nICA/C7 = 1, nMCA/M1 = 4, nVA/V4 = 2, nBA = 2) and the visual IAS grading (3DA/3D-DSA:nlow-grade = 3, nmedium-grade = 5, nhigh-grade = 2) revealed identical results for 3DA and 3D-DSA, respectively. Quantitative IAS assessment showed a strong correlation regarding intra-/poststenotic diameters (rdintrastenotic = 0.995, pdintrastenotic = 0.0001; rdpoststenotic = 0.995, pdpoststenotic = 0.0001) and the percentual degree of luminal restriction (rNASCET 3DA = 0.981; pNASCET 3DA = 0.0001). Conclusions: The AI-based 3DA is a resilient algorithm for the visualization of IAS and shows comparable results to 3D-DSA. Hence, 3DA is a promising new method that allows a considerable patient-dose reduction, and its clinical implementation would be highly desirable.
    Type of Medium: Online Resource
    ISSN: 2075-4418
    Language: English
    Publisher: MDPI AG
    Publication Date: 2023
    detail.hit.zdb_id: 2662336-5
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