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  • 1
    Online Resource
    Online Resource
    Large expert-curated database for benchmarking document similarity detection in biomedical literature search
    Oxford University Press (OUP) ; 2019
    In:  Database Vol. 2019 ( 2019-01-01)
    Details
    In: Database, Oxford University Press (OUP), Vol. 2019 ( 2019-01-01)
    Abstract: Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency–Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical research.
    Type of Medium: Online Resource
    ISSN: 1758-0463
    URL: Article
    DOI: 10.1093/database/baz085
    Language: English
    Publisher: Oxford University Press (OUP)
    Publication Date: 2019
    detail.hit.zdb_id: 2496706-3
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  • 2
    Online Resource
    Online Resource
    PHANGS–JWST First Results: Multiwavelength View of Feedback-driven Bubbles (the Phantom Voids) across NGC 628
    American Astronomical Society ; 2023
    In:  The Astrophysical Journal Letters Vol. 944, No. 2 ( 2023-02-01), p. L22-
    Details
    In: The Astrophysical Journal Letters, American Astronomical Society, Vol. 944, No. 2 ( 2023-02-01), p. L22-
    Abstract: We present a high-resolution view of bubbles within the Phantom Galaxy (NGC 628), a nearby (∼10 Mpc), star-forming (∼2 M ⊙ yr −1 ), face-on ( i ∼ 9°) grand-design spiral galaxy. With new data obtained as part of the Physics at High Angular resolution in Nearby GalaxieS (PHANGS)-JWST treasury program, we perform a detailed case study of two regions of interest, one of which contains the largest and most prominent bubble in the galaxy (the Phantom Void, over 1 kpc in diameter), and the other being a smaller region that may be the precursor to such a large bubble (the Precursor Phantom Void). When comparing to matched-resolution H α observations from the Hubble Space Telescope, we see that the ionized gas is brightest in the shells of both bubbles, and is coincident with the youngest (∼1 Myr) and most massive (∼10 5 M ⊙ ) stellar associations. We also find an older generation (∼20 Myr) of stellar associations is present within the bubble of the Phantom Void. From our kinematic analysis of the H I , H 2 (CO), and H ii gas across the Phantom Void, we infer a high expansion speed of around 15 to 50 km s −1 . The large size and high expansion speed of the Phantom Void suggest that the driving mechanism is sustained stellar feedback due to multiple mechanisms, where early feedback first cleared a bubble (as we observe now in the Precursor Phantom Void), and since then supernovae have been exploding within the cavity and have accelerated the shell. Finally, comparison to simulations shows a striking resemblance to our JWST observations, and suggests that such large-scale, stellar-feedback-driven bubbles should be common within other galaxies.
    Type of Medium: Online Resource
    ISSN: 2041-8205 , 2041-8213
    URL: Article
    DOI: 10.3847/2041-8213/aca7b9
    Language: Unknown
    Publisher: American Astronomical Society
    Publication Date: 2023
    detail.hit.zdb_id: 2207648-7
    detail.hit.zdb_id: 2006858-X
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  • 3
    Online Resource
    Online Resource
    PHANGS–JWST First Results: A Statistical View on Bubble Evolution in NGC 628
    American Astronomical Society ; 2023
    In:  The Astrophysical Journal Letters Vol. 944, No. 2 ( 2023-02-01), p. L24-
    Details
    In: The Astrophysical Journal Letters, American Astronomical Society, Vol. 944, No. 2 ( 2023-02-01), p. L24-
    Abstract: The first JWST observations of nearby galaxies have unveiled a rich population of bubbles that trace the stellar-feedback mechanisms responsible for their creation. Studying these bubbles therefore allows us to chart the interaction between stellar feedback and the interstellar medium, and the larger galactic flows needed to regulate star formation processes globally. We present the first catalog of bubbles in NGC 628, visually identified using Mid-Infrared Instrument F770W Physics at High Angular resolution in Nearby GalaxieS (PHANGS)–JWST observations, and use them to statistically evaluate bubble characteristics. We classify 1694 structures as bubbles with radii between 6 and 552 pc. Of these, 31% contain at least one smaller bubble at their edge, indicating that previous generations of star formation have a local impact on where new stars form. On large scales, most bubbles lie near a spiral arm, and their radii increase downstream compared to upstream. Furthermore, bubbles are elongated in a similar direction to the spiral-arm ridgeline. These azimuthal trends demonstrate that star formation is intimately connected to the spiral-arm passage. Finally, the bubble size distribution follows a power law of index p = −2.2 ± 0.1, which is slightly shallower than the theoretical value by 1–3.5 σ that did not include bubble mergers. The fraction of bubbles identified within the shells of larger bubbles suggests that bubble merging is a common process. Our analysis therefore allows us to quantify the number of star-forming regions that are influenced by an earlier generation, and the role feedback processes have in setting the global star formation rate. With the full PHANGS–JWST sample, we can do this for more galaxies.
    Type of Medium: Online Resource
    ISSN: 2041-8205 , 2041-8213
    URL: Article
    DOI: 10.3847/2041-8213/aca6e4
    Language: Unknown
    Publisher: American Astronomical Society
    Publication Date: 2023
    detail.hit.zdb_id: 2207648-7
    detail.hit.zdb_id: 2006858-X
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  • 4
    Online Resource
    Online Resource
    The Panchromatic Hubble Andromeda Treasury: Triangulum Extended Region (PHATTER). I. Ultraviolet to Infrared Photometry of 22 Million Stars in M33
    American Astronomical Society ; 2021
    In:  The Astrophysical Journal Supplement Series Vol. 253, No. 2 ( 2021-04-01), p. 53-
    Details
    In: The Astrophysical Journal Supplement Series, American Astronomical Society, Vol. 253, No. 2 ( 2021-04-01), p. 53-
    Abstract: We present panchromatic resolved stellar photometry for 22 million stars in the Local Group dwarf spiral Triangulum (M33), derived from Hubble Space Telescope observations with the Advanced Camera for Surveys in the optical (F475W, F814W), and the Wide Field Camera 3 in the near-ultraviolet (F275W, F336W) and near-infrared (F110W, F160W) bands. The large, contiguous survey area covers ∼14 square kpc and extends to 3.5 kpc (14′, or 1.5–2 scale lengths) from the center of M33. The PHATTER observing strategy and photometry technique closely mimics that of Panchromatic Hubble Andromeda Treasury, but with updated photometry techniques that take full advantage of all overlapping pointings (aligned to within 〈 5–10 milliarcseconds) and improved treatment of spatially varying point-spread functions. The photometry reaches a completeness-limited depth of F475W∼28.5 in the lowest surface density regions observed in M33 and F475W∼26.5 in the most crowded regions found near the center of M33. We find the young populations trace several relatively tight arms, while the old populations show a clear, looser two-armed structure. We present extensive analysis of the data quality, including artificial star tests to quantify completeness, photometric uncertainties, and flux biases. This stellar catalog is the largest ever produced for M33, and is publicly available for download by the community.
    Type of Medium: Online Resource
    ISSN: 0067-0049 , 1538-4365
    URL: Article
    DOI: 10.3847/1538-4365/abdf4e
    RVK:
    UA 1000
    Language: Unknown
    Publisher: American Astronomical Society
    Publication Date: 2021
    detail.hit.zdb_id: 2006860-8
    detail.hit.zdb_id: 2207650-5
    SSG: 16,12
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  • 5
    Online Resource
    Online Resource
    Star Formation Laws and Efficiencies across 80 Nearby Galaxies
    American Astronomical Society ; 2023
    In:  The Astrophysical Journal Letters Vol. 945, No. 2 ( 2023-03-01), p. L19-
    Details
    In: The Astrophysical Journal Letters, American Astronomical Society, Vol. 945, No. 2 ( 2023-03-01), p. L19-
    Abstract: We measure empirical relationships between the local star formation rate (SFR) and properties of the star-forming molecular gas on 1.5 kpc scales across 80 nearby galaxies. These relationships, commonly referred to as “star formation laws,” aim at predicting the local SFR surface density from various combinations of molecular gas surface density, galactic orbital time, molecular cloud free fall time, and the interstellar medium dynamical equilibrium pressure. Leveraging a multiwavelength database built for the Physics at High Angular Resolution in Nearby Galaxies (PHANGS) survey, we measure these quantities consistently across all galaxies and quantify systematic uncertainties stemming from choices of SFR calibrations and the CO-to-H 2 conversion factors. The star formation laws we examine show 0.3–0.4 dex of intrinsic scatter, among which the molecular Kennicutt–Schmidt relation shows a ∼10% larger scatter than the other three. The slope of this relation ranges β ≈ 0.9–1.2, implying that the molecular gas depletion time remains roughly constant across the environments probed in our sample. The other relations have shallower slopes ( β ≈ 0.6–1.0), suggesting that the star formation efficiency per orbital time, the star formation efficiency per free fall time, and the pressure-to-SFR surface density ratio (i.e., the feedback yield) vary systematically with local molecular gas and SFR surface densities. Last but not least, the shapes of the star formation laws depend sensitively on methodological choices. Different choices of SFR calibrations can introduce systematic uncertainties of at least 10%–15% in the star formation law slopes and 0.15–0.25 dex in their normalization, while the CO-to-H 2 conversion factors can additionally produce uncertainties of 20%–25% for the slope and 0.10–0.20 dex for the normalization.
    Type of Medium: Online Resource
    ISSN: 2041-8205 , 2041-8213
    URL: Article
    DOI: 10.3847/2041-8213/acbd9c
    Language: Unknown
    Publisher: American Astronomical Society
    Publication Date: 2023
    detail.hit.zdb_id: 2207648-7
    detail.hit.zdb_id: 2006858-X
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  • 6
    Online Resource
    Online Resource
    PHANGS–JWST First Results: Tracing the Diffuse Interstellar Medium with JWST Imaging of Polycyclic Aromatic Hydrocarbon Emission in Nearby Galaxies
    American Astronomical Society ; 2023
    In:  The Astrophysical Journal Letters Vol. 944, No. 2 ( 2023-02-01), p. L8-
    Details
    In: The Astrophysical Journal Letters, American Astronomical Society, Vol. 944, No. 2 ( 2023-02-01), p. L8-
    Abstract: JWST observations of polycyclic aromatic hydrocarbon (PAH) emission provide some of the deepest and highest resolution views of the cold interstellar medium (ISM) in nearby galaxies. If PAHs are well mixed with the atomic and molecular gas and illuminated by the average diffuse interstellar radiation field, PAH emission may provide an approximately linear, high-resolution, high-sensitivity tracer of diffuse gas surface density. We present a pilot study that explores using PAH emission in this way based on Mid-Infrared Instrument observations of IC 5332, NGC 628, NGC 1365, and NGC 7496 from the Physics at High Angular resolution in Nearby GalaxieS-JWST Treasury. Using scaling relationships calibrated in Leroy et al., scaled F1130W provides 10–40 pc resolution and 3 σ sensitivity of Σ gas ∼ 2 M ⊙ pc −2 . We characterize the surface densities of structures seen at 〈 7 M ⊙ pc −2 in our targets, where we expect the gas to be H i -dominated. We highlight the existence of filaments, interarm emission, and holes in the diffuse ISM at these low surface densities. Below ∼10 M ⊙ pc −2 for NGC 628, NGC 1365, and NGC 7496 the gas distribution shows a “Swiss cheese”-like topology due to holes and bubbles pervading the relatively smooth distribution of the diffuse ISM. Comparing to recent galaxy simulations, we observe similar topology for the low-surface-density gas, though with notable variations between simulations with different setups and resolution. Such a comparison of high-resolution, low-surface-density gas with simulations is not possible with existing atomic and molecular gas maps, highlighting the unique power of JWST maps of PAH emission.
    Type of Medium: Online Resource
    ISSN: 2041-8205 , 2041-8213
    URL: Article
    DOI: 10.3847/2041-8213/aca972
    Language: Unknown
    Publisher: American Astronomical Society
    Publication Date: 2023
    detail.hit.zdb_id: 2207648-7
    detail.hit.zdb_id: 2006858-X
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  • 7
    Online Resource
    Online Resource
    PHANGS–ALMA: Arcsecond CO(2–1) Imaging of Nearby Star-forming Galaxies
    American Astronomical Society ; 2021
    In:  The Astrophysical Journal Supplement Series Vol. 257, No. 2 ( 2021-12-01), p. 43-
    Details
    In: The Astrophysical Journal Supplement Series, American Astronomical Society, Vol. 257, No. 2 ( 2021-12-01), p. 43-
    Abstract: We present PHANGS–ALMA, the first survey to map CO J = 2 → 1 line emission at ∼1″ ∼100 pc spatial resolution from a representative sample of 90 nearby ( d ≲ 20 Mpc) galaxies that lie on or near the z = 0 “main sequence” of star-forming galaxies. CO line emission traces the bulk distribution of molecular gas, which is the cold, star-forming phase of the interstellar medium. At the resolution achieved by PHANGS–ALMA, each beam reaches the size of a typical individual giant molecular cloud, so that these data can be used to measure the demographics, life cycle, and physical state of molecular clouds across the population of galaxies where the majority of stars form at z = 0. This paper describes the scientific motivation and background for the survey, sample selection, global properties of the targets, Atacama Large Millimeter/submillimeter Array (ALMA) observations, and characteristics of the delivered data and derived data products. As the ALMA sample serves as the parent sample for parallel surveys with MUSE on the Very Large Telescope, the Hubble Space Telescope, AstroSat, the Very Large Array, and other facilities, we include a detailed discussion of the sample selection. We detail the estimation of galaxy mass, size, star formation rate, CO luminosity, and other properties, compare estimates using different systems and provide best-estimate integrated measurements for each target. We also report the design and execution of the ALMA observations, which combine a Cycle 5 Large Program, a series of smaller programs, and archival observations. Finally, we present the first 1″ resolution atlas of CO emission from nearby galaxies and describe the properties and contents of the first PHANGS–ALMA public data release.
    Type of Medium: Online Resource
    ISSN: 0067-0049 , 1538-4365
    URL: Article
    DOI: 10.3847/1538-4365/ac17f3
    RVK:
    UA 1000
    Language: Unknown
    Publisher: American Astronomical Society
    Publication Date: 2021
    detail.hit.zdb_id: 2006860-8
    detail.hit.zdb_id: 2207650-5
    SSG: 16,12
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  • 8
    Online Resource
    Online Resource
    The PHANGS–JWST Treasury Survey: Star Formation, Feedback, and Dust Physics at High Angular Resolution in Nearby GalaxieS
    American Astronomical Society ; 2023
    In:  The Astrophysical Journal Letters Vol. 944, No. 2 ( 2023-02-01), p. L17-
    Details
    In: The Astrophysical Journal Letters, American Astronomical Society, Vol. 944, No. 2 ( 2023-02-01), p. L17-
    Abstract: The PHANGS collaboration has been building a reference data set for the multiscale, multiphase study of star formation and the interstellar medium (ISM) in nearby galaxies. With the successful launch and commissioning of JWST, we can now obtain high-resolution infrared imaging to probe the youngest stellar populations and dust emission on the scales of star clusters and molecular clouds (∼5–50 pc). In Cycle 1, PHANGS is conducting an eight-band imaging survey from 2 to 21 μ m of 19 nearby spiral galaxies. Optical integral field spectroscopy, CO(2–1) mapping, and UV-optical imaging for all 19 galaxies have been obtained through large programs with ALMA, VLT-MUSE, and Hubble. PHANGS–JWST enables a full inventory of star formation, accurate measurement of the mass and age of star clusters, identification of the youngest embedded stellar populations, and characterization of the physical state of small dust grains. When combined with Hubble catalogs of ∼10,000 star clusters, MUSE spectroscopic mapping of ∼20,000 H ii regions, and ∼12,000 ALMA-identified molecular clouds, it becomes possible to measure the timescales and efficiencies of the earliest phases of star formation and feedback, build an empirical model of the dependence of small dust grain properties on local ISM conditions, and test our understanding of how dust-reprocessed starlight traces star formation activity, all across a diversity of galactic environments. Here we describe the PHANGS–JWST Treasury survey, present the remarkable imaging obtained in the first few months of science operations, and provide context for the initial results presented in the first series of PHANGS–JWST publications.
    Type of Medium: Online Resource
    ISSN: 2041-8205 , 2041-8213
    URL: Article
    DOI: 10.3847/2041-8213/acaaae
    Language: Unknown
    Publisher: American Astronomical Society
    Publication Date: 2023
    detail.hit.zdb_id: 2207648-7
    detail.hit.zdb_id: 2006858-X
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  • 9
    Online Resource
    Online Resource
    PHANGS–JWST First Results: Mid-infrared Emission Traces Both Gas Column Density and Heating at 100 pc Scales
    American Astronomical Society ; 2023
    In:  The Astrophysical Journal Letters Vol. 944, No. 2 ( 2023-02-01), p. L9-
    Details
    In: The Astrophysical Journal Letters, American Astronomical Society, Vol. 944, No. 2 ( 2023-02-01), p. L9-
    Abstract: We compare mid-infrared (mid-IR), extinction-corrected H α , and CO (2–1) emission at 70–160 pc resolution in the first four PHANGS–JWST targets. We report correlation strengths, intensity ratios, and power-law fits relating emission in JWST’s F770W, F1000W, F1130W, and F2100W bands to CO and H α . At these scales, CO and H α each correlate strongly with mid-IR emission, and these correlations are each stronger than the one relating CO to H α emission. This reflects that mid-IR emission simultaneously acts as a dust column density tracer, leading to a good match with the molecular-gas-tracing CO, and as a heating tracer, leading to a good match with the H α . By combining mid-IR, CO, and H α at scales where the overall correlation between cold gas and star formation begins to break down, we are able to separate these two effects. We model the mid-IR above I ν = 0.5 MJy sr −1 at F770W, a cut designed to select regions where the molecular gas dominates the interstellar medium (ISM) mass. This bright emission can be described to first order by a model that combines a CO-tracing component and an H α -tracing component. The best-fitting models imply that ∼50% of the mid-IR flux arises from molecular gas heated by the diffuse interstellar radiation field, with the remaining ∼50% associated with bright, dusty star-forming regions. We discuss differences between the F770W, F1000W, and F1130W bands and the continuum-dominated F2100W band and suggest next steps for using the mid-IR as an ISM tracer.
    Type of Medium: Online Resource
    ISSN: 2041-8205 , 2041-8213
    URL: Article
    DOI: 10.3847/2041-8213/acaf85
    Language: Unknown
    Publisher: American Astronomical Society
    Publication Date: 2023
    detail.hit.zdb_id: 2207648-7
    detail.hit.zdb_id: 2006858-X
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  • 10
    Online Resource
    Online Resource
    PHANGS–JWST First Results: Interstellar Medium Structure on the Turbulent Jeans Scale in Four Disk Galaxies Observed by JWST and the Atacama Large Millimeter/submillimeter Array
    American Astronomical Society ; 2023
    In:  The Astrophysical Journal Letters Vol. 944, No. 2 ( 2023-02-01), p. L18-
    Details
    In: The Astrophysical Journal Letters, American Astronomical Society, Vol. 944, No. 2 ( 2023-02-01), p. L18-
    Abstract: JWST/Mid-Infrared Instrument imaging of the nearby galaxies IC 5332, NGC 628, NGC 1365, and NGC 7496 from PHANGS reveals a richness of gas structures that in each case form a quasi-regular network of interconnected filaments, shells, and voids. We examine whether this multiscale network of structure is consistent with the fragmentation of the gas disk through gravitational instability. We use FilFinder to detect the web of filamentary features in each galaxy and determine their characteristic radial and azimuthal spacings. These spacings are then compared to estimates of the most Toomre-unstable length (a few kiloparsecs), the turbulent Jeans length (a few hundred parsecs), and the disk scale height (tens of parsecs) reconstructed using PHANGS–Atacama Large Millimeter/submillimeter Array observations of the molecular gas as a dynamical tracer. Our analysis of the four galaxies targeted in this work indicates that Jeans-scale structure is pervasive. Future work will be essential for determining how the structure observed in gas disks impacts not only the rate and location of star formation but also how stellar feedback interacts positively or negatively with the surrounding multiphase gas reservoir.
    Type of Medium: Online Resource
    ISSN: 2041-8205 , 2041-8213
    URL: Article
    DOI: 10.3847/2041-8213/acaaa8
    Language: Unknown
    Publisher: American Astronomical Society
    Publication Date: 2023
    detail.hit.zdb_id: 2207648-7
    detail.hit.zdb_id: 2006858-X
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