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  • 1
    In: Blood, American Society of Hematology, Vol. 116, No. 21 ( 2010-11-19), p. 1669-1669
    Kurzfassung: Abstract 1669 Background: Acute myeloid leukemia (AML) with normal karyotype (NK) comprises of 40–50% in overall AML population, presenting diverse and heterogeneous clinical behavior and prognosis. Recent study by Tiu et al (JCO 2009, 27(31); 5219-26) presented that new lesions detected by genome-wide single nucleotide polymorphism arrays (SNP-A) based karyotyping represent worse prognosis in 140 AML patients including 50 patients with AML-NK. The current study investigated diagnostic and prognostic role of SNP-A based karyotying in 100 patients with AML-NK treated with homogeneous treatment protocol. Methods and materials: A total of 100 patients with AML-NK confirmed by cytogenetic analysis and FISH analysis included in this study. All of the patients were diagnosed as AML-NK between 1998 and 2009 and received idarubicin plus cytarabine 3+7 induction chemotherapy at 4 hospitals in Korea. Genome-Wide Human SNP 6.0 Array (Affymetrix, CA, USA) was performed using DNAs derived from marrow samples taken at the time of diagnosis. Genotyping Console version 3.1 software was used for SNP-A karyotyping analysis. Results: In overall patients, complete remission (CR) rate was 89%, and the 2-years' rate of EFS and OS was 56.6±5.6% and 63.2±5.5%, respectively. The median duration of EFS and OS was 32.7 months and 76.6 months. Ninty-six clonal aberrations (CAs) were identified in 34 patients (34%) which were not detected by metaphase cytogenetics which were normal karyotype. These CAs included 44 losses at 17q, 17p, 7q, 11p, 1p, 5q, 6q, 7p, and 19p; 23 gains at chromosome 8, 9p, 15q, 17p, 17q, 21q, and 22q; and 29 uniparental disomies (UPDs) at 13q, 11p, 11q, 19q, 21q and 22q. When analyzed the CR rate according to the presence of CAs, no association was noted between the group with and without CAs (91% vs 87%; p=0.6). With respect to EFS, the group with CAs showed worse 2-years' EFS rate than those without CAs (39.0±9.5% vs 64.9±6.6%; p=0.05). As regards to OS, the group with CAs showed worse 2-years' EFS rate than those without CAs (40.7±9.6% vs 73.7±6.4%; p=0.01). Multivariate analyses showed that the CAs detected by SNP-A karyotyping has unfavorable prognostic value for EFS (hazard ratio [HR] = 3.29; 95% CI, 1.70 to 6.37; P 〈 0 .001) and OS (HR = 4.06; 95% CI, 1.93 to 8.56; P 〈 0.001) together with other significant prognostic factors (age above 60 years and WBC counts over 100×109/L at presentation). Conclusion: Our data showed that 1) Ninty six CAs were detected in one third of patients with AML-NK, and that 2) CAs represent unfavorable prognostic factor, thus requiring further sophisticated treatment strategy including allogeneic stem cell transplantation and novel therapy. Overall and event free survival by the presence of clonal aberrations (CAs) detected by SNP-array karyotyping (dot: group without CAs/line: group with CAs) Disclosures: No relevant conflicts of interest to declare.
    Materialart: Online-Ressource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Sprache: Englisch
    Verlag: American Society of Hematology
    Publikationsdatum: 2010
    ZDB Id: 1468538-3
    ZDB Id: 80069-7
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 2
    In: JAMA Surgery, American Medical Association (AMA), Vol. 157, No. 10 ( 2022-10-01), p. 879-
    Kurzfassung: The long-term safety of laparoscopic distal gastrectomy for locally advanced gastric cancer (AGC) remains uncertain given the lack of 5-year follow-up results. Objective To compare the 5-year follow-up results in patients with clinically AGC enrolled in the Korean Laparoendoscopic Gastrointestinal Surgery Study (KLASS)-02 randomized clinical trial who underwent laparoscopic or open distal gastrectomy. Design, Setting, and Participants The KLASS-02, a multicenter randomized clinical trial, showed that laparoscopic surgery was noninferior to open surgery for patients with locally AGC. The present study assessed the 5-year follow-up results, including 5-year overall survival (OS) and relapse-free survival (RFS) rates and long-term complications, in patients enrolled in KLASS-02. From November 21, 2011, to April 29, 2015, patients aged 20 to 80 years diagnosed preoperatively with locally AGC were enrolled. Final follow-up was on June 15, 2021. Data were analyzed June 24 to September 9, 2021. Interventions Patients were treated with R0 resection either by laparoscopic gastrectomy or open gastrectomy as the full analysis set of the KLASS-02 trial. Main Outcomes and Measures Five-year OS and RFS rates, recurrence patterns, and long-term surgical complications were evaluated. Results This study enrolled a total of 1050 patients. A total of 974 patients were treated with R0 resection; 492 (50.5%) in the laparoscopic gastrectomy group (mean [SD] age, 59.8 [11.0] years; 351 men [71.3%]) and 482 (49.5%) in the open gastrectomy group (mean [SD] age, 59.4 [11.5] years; 335 men [69.5%] ). In patients who underwent laparoscopic and open distal gastrectomy, the 5-year OS (88.9% vs 88.7%) and RFS (79.5% vs 81.1%) rates did not differ significantly. The most common types of recurrence were peritoneal carcinomatosis (73 of 173 [42.1%]), hematogenous metastases (36 of 173 [20.8%] ), and locoregional recurrence (23 of 173 [13.2%]), with no between-group differences in types of recurrence at each cancer stage. The correlation between 3-year RFS and 5-year OS at the individual level was highest in patients with stage III gastric cancer (ρ = 0.720). The late complication rate was significantly lower in the laparoscopic than in the open surgery group (32 of 492 [6.5%] vs 53 of 482 [11.0%]). The most common type of complication in both groups was intestinal obstruction (13 of 492 [2.6%] vs 24 of 482 [5.0%]). Conclusions and Relevance The 5-year outcomes of the KLASS-02 trial support the 3-year results, which is the noninferiority of laparoscopic surgery compared with open gastrectomy for locally AGC. The laparoscopic approach can be recommended in patients with locally AGC to achieve the benefit of low incidence of late complications. Trial Registration ClinicalTrials.gov Identifier: NCT01456598
    Materialart: Online-Ressource
    ISSN: 2168-6254
    Sprache: Englisch
    Verlag: American Medical Association (AMA)
    Publikationsdatum: 2022
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 3
    In: BMC Cancer, Springer Science and Business Media LLC, Vol. 19, No. 1 ( 2019-12)
    Kurzfassung: The upregulated expression of the JAK/STAT pathway promotes tumor growth in Hodgkin lymphoma (HL) and primary mediastinal large B-cell lymphoma (PMBCL). Based on the hypothesis that JAK2 is a therapeutic target, we performed a prospective pilot study using ruxolitinib. Methods Relapsed or refractory patients with HL or PMBCL were eligible for this study, and JAK2 amplification was assessed by fluorescence in situ hybridization. Ruxolitinib was administered orally at a dose of 20 mg twice daily for a 28-day cycle. Treatment was continued for up to 16 cycles or until progressive disease or intolerability. The primary objective was to assess the overall disease control rate comprising complete response (CR), partial response (PR), or stable disease (SD). Results We analyzed 13 HL patients and six PMBCL patients. All responders (one CR, five PR, and one SD) had HL whereas all cases of PMBCL progressed after first or second cycle. The disease control rate for HL was 54% (7/13) with median response duration of 5.6 months. JAK2 amplification was present in six of nine patients tested (four HL, two PMBCL), and three of these HL patients showed PR ( n  = 2) or SD ( n  = 1). None of the three HL patients shown to not have JAK2 amplification responded to ruxolitinib. Most treatment-related adverse events were grade 1 or 2 and manageable. Conclusions Ruxolitinib has single-agent activity against HL but does not act against PMBCL with or without JAK2 amplification. Trial registration The study population was patients who had relapsed or refractory HL or PMBCL, and patients were registered for our pilot study after providing written informed consent between November 2013 and November 2015 (CilinicalTrials.gov: NCT01965119 ).
    Materialart: Online-Ressource
    ISSN: 1471-2407
    Sprache: Englisch
    Verlag: Springer Science and Business Media LLC
    Publikationsdatum: 2019
    ZDB Id: 2041352-X
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 4
    In: Journal of Clinical Oncology, American Society of Clinical Oncology (ASCO), Vol. 29, No. 35 ( 2011-12-10), p. 4702-4708
    Kurzfassung: This study attempted to analyze the prognostic role of single nucleotide polymorphism array (SNP-A) –based karyotying in 133 patients with acute myeloid leukemia with normal karyotype (AML-NK), which presents with diverse clinical outcomes, thus requiring further stratification of patient subgroups according to their prognoses. Patients and Methods A total of 133 patients with AML-NK confirmed by metaphase cytogenetics (MC) and fluorescent in situ hybridization analysis were included in this study. Analysis by Genome-Wide Human SNP 6.0 Array was performed by using DNAs derived from marrow samples at diagnosis. Results Forty-three patients (32.3%) had at least one abnormal SNP lesion that was not detected by MC. One hundred thirteen abnormal SNP lesions included 55 losses, 23 gains, and 35 copy-neutral losses of heterozygosity. Multivariate analyses showed that detection of abnormal SNP lesions by SNP-A karyotyping results in an unfavorable prognostic value for overall survival (hazard ratio [HR], 2.69; 95% CI, 1.50 to 4.82; P = .001); other significant prognostic factors included secondary AML (HR, 5.55; 95% CI, 1.80 to 17.14; P = .003), presence of the FLT3 mutation (HR, 3.17; 95% CI, 1.71 to 5.87; P 〈 .001), and age (HR, 1.03; 95% CI, 1.01 to 1.05; P = .020). Conclusion Our data demonstrated that abnormal SNP lesions detected by SNP-A karyotyping might indicate an adverse prognosis in patients with AML-NK, thus requiring a more sophisticated treatment strategy for improvement of treatment outcomes.
    Materialart: Online-Ressource
    ISSN: 0732-183X , 1527-7755
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    Sprache: Englisch
    Verlag: American Society of Clinical Oncology (ASCO)
    Publikationsdatum: 2011
    ZDB Id: 2005181-5
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 5
    In: Blood, American Society of Hematology, Vol. 120, No. 21 ( 2012-11-16), p. 2593-2593
    Kurzfassung: Abstract 2593 Background: NK-AML represents genetically heterogeneous group of disease. However genetic lesions affecting treatment outcome in patients with NK-AML are relatively unknown. Methods: The discovery cohort consists of 67 NK-AML patients in complete remission (median age: 49.2, ranges: 19–70) without FLT-3 mutations. Genomic DNA was extracted from enriched AML cells at diagnosis or control specimens obtained after complete remission. Whole exomes were captured using Agilent SureSelect and sequencing were performed by HiSeq2000 with 41∼89× coverage. Bioinformatics analysis and identification of somatic mutation has been done by series of software such as BWA, Picard, GATK, VarScan 2, and custom-made scripts. All the data has been re-checked by manual inspection. Validation has been done independent set of cohort (358 NK-AML patients, median age: 51, ranges: 15–85) with Sanger sequencing on highly mutated target sites. Results: Filtering against dbSNP and COSMIC database generated 485 genes with somatic and structural variations. Among them, 41 genes were detected in more than two patients. In addition to well-known 28 mutations, 13 novel mutations with different frequencies were identified including genes responsible for structural maintenance of chromosome (SMC1A, 6.0%) and tumor suppressor function (FAT1, 6.0%). Most common type of mutation was missense mutation (70.8%), and substantial fraction of mutation was splicing site mutations (3.8%). The hematological system development and hematologic function were most highly enriched by the Ingenuity Pathway Analysis (IPA) as expected. CIRCOS plot analysis showed similar co-occurring pattern of recurrent mutations with previous reports. Hierarchical clustering analysis divided into four different groups according to the number of harboring mutations. In network analysis four distinct subgroups were observed ranging 21 to 3 gene network. Conclusion: Using whole exome sequencing approach, a catalog of recurrent mutations was successfully defined in the patients with NK-AML without FLT3/ITD mutation. This candidate list of novel mutations should be tested further for therapeutic target and prognostic marker in the patients with NK-AML. Disclosures: No relevant conflicts of interest to declare.
    Materialart: Online-Ressource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Sprache: Englisch
    Verlag: American Society of Hematology
    Publikationsdatum: 2012
    ZDB Id: 1468538-3
    ZDB Id: 80069-7
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 6
    In: Blood, American Society of Hematology, Vol. 120, No. 21 ( 2012-11-16), p. 2534-2534
    Kurzfassung: Abstract 2534 Background: Acute myeloid leukemia with normal karyotype (AML-NK) is known to be heterogeneous in the molecular level. Accordingly, it has become more critical to dissect this group of patients according to their prognosis using a molecular genetic technology. We attempted to analyze the incidence and prognostic implication of genetic abnormalities on survival in 426 adult patients with AML-NK. Methods: A total of 67 AML-NK patients achieved complete remission (CR), candidate mutations in 21 genes were identified by whole exome sequencing which has 41–89× coverage and by single-nucleotide polymorphism array analysis using marrow mononuclear cells at diagnosis of AML-NK. Subsequently, mutation analysis of 11 genes (i.e. FLT3/ITD, NPM1, DNMT3a, IDH1, IDH2, TET2, NRAS, WT1, DNAH11, SF3B1, and PHF6) which are known to be involved in the pathogenesis of hematologic diseases, were performed using Sanger sequencing in another subset of 359 AML-NK patients as a validation cohort. Results: Of 426 patients in total (median age: 51, ranges: 15–85), FLT3/ITD, NPM1, and DNMT3a mutations were associated with higher leukocytes counts at presentation of AML-NK. In 284 patients who received standard remission induction (RI) chemotherapy (excluding 119 patients with conservative treatment and 22 early death/1 follow-up loss after RI chemotherapy), those with FLT3/ITD mutation were significantly associated with a higher risk of relapse (p=0.02), a shorter leukemic-free survival duration (LFS)(p 〈 0.01) or overall survival (OS) (p=0.01). Accordingly, we divided the patients into FLT3/ITD+ and FLT3/ITD− population, and analyzed their treatment outcomes according to the other mutations. In the FLT3/ITD− group (n=200), those with NPM1 mutation showed a higher CR rates after one or two cycles of RI chemotherapy (p 〈 0.01) and a longer OS duration (p 〈 0.01), hazard ratio (HR) 0.43, 95% confidence interval (CI) 0.25–0.73, adjusted by other clinical variables including age, leukocyte counts at diagnosis, and transplantation (Figure 1). In the FLT3/ITD+ patients (n=84), NPM1 mutation was found to be a favorable prognostic factor showing a lower relapse rate (p=0.00), a longer LFS duration (p 〈 0.01, HR 0.35, 95% CI 0.18–0.70), and OS duration (p=0.04, HR 0.55, 95% CI 0.31–0.98) in NPM1 mutated patients. In addition, OS was significantly different in favor of those with IDH2, especially R140Q IDH2 mutation, (p=0.04, HR 0.30, 95% CI 0.09–0.99), whereas DNAH11 mutation was associated with inferior OS (p 〈 0.01, HR 5.78, 95% CI 1.65–20.25). Accordingly, we stratified the FLT3/ITD+ patients into three subgroups according to the NPM1, IDH1/2 and DNAH11 mutation status, Group 1: NPM1 mutation and IDH1 or 2 mutations (n=16), Group 2: isolated DNAH11 mutation (n=4) and Group 3: all mutations were negative (n=64). The group 1 showed significantly better OS than group 2 (p 〈 0.01, HR 16.90, 95% CI 3.48–82.15) or group 3 (p 〈 0.01, HR 3.40, 95% CI 1.20–9.55) (Figure 2). In a subgroup analysis of younger patients less than 60 years of age, similar outcomes were also observed in favor of group 1 in terms of OS (data not shown). Conclusion: Our study confirmed that NPM1 mutation is an independent prognostic factor in adult patients with AML-NK not harboring FLT3/ITD mutation. In addition, several other genetic markers were identified as prognostic including IDH1/2 or DNAH11 mutations as well as NPM1 mutation in a subgroup of AML-NK patients with FLT3/ITD mutation. Disclosures: No relevant conflicts of interest to declare.
    Materialart: Online-Ressource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Sprache: Englisch
    Verlag: American Society of Hematology
    Publikationsdatum: 2012
    ZDB Id: 1468538-3
    ZDB Id: 80069-7
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 7
    In: Blood, American Society of Hematology, Vol. 116, No. 21 ( 2010-11-19), p. 2698-2698
    Kurzfassung: Abstract 2698 Introduction: AML is a heterogeneous disease characterized by various recurrent cytogenetic abnormalities, which provide the most important prognostic information. Although AML with normal karyotype (AML-NK) constitutes the largest subgroup representing 45–50% of adult AMLs, the prognosis of AML-NK is quite heterogeneous and their clinical outcomes are diverse. Several model capable of identifying non-responders prior to induction treatment has been proposed in AML-NK. While molecular-guided risk assessment (i.e. FLT3/ITD mutation or NPM1 mutation) and stratification are needed to confirm their prognostic significances, it is quite enthusiastic that genetic variations associated with ADMET (adsorption, desorption, metabolism, excretion, and transport) genes predict the responsiveness of anticancer drugs with better predictive power compared to other genomic variations based stratification. It is also expected SNP markers that reside within the loci of these genetic pathways may play an important role to classify responders and non-responders in AML-NK. Methods and materials: A high density SNP genotyping microarray designed by our group (custom PGX chip; Samsung Electronics Co., Suwon, Korea) was evaluated in 139 patients with AML-NK as a discovery set using both custom PGX chip and Affymetrix SNP array 6.0 (Affymetrix Inc., Santa Clara, CA USA). The DNA samples were obtained from the marrow samples at the time of diagnosis. The custom PGx chip included more extensive SNP markers of ADMET genes and cancer-related genes. Genotypes were determined by Birdseed v2 algorithm for Affymetrix SNP 6.0 and by BRLMM-p for custom PGx chip. Genotypes from 906,600 SNPs were obtained in Affymetrix SNP 6.0 chip while custom PGx chip provided genotype information of 90,647 SNPs. Between Affymetrix SNP 6.0 and custom PGx chip, 67,251 SNPs were shared. ADMET and cancer-related SNPs (n=23,396) were only available on custom PGx chip. The predictive model for the achievement of complete remission was developed using Max Test method with leave-one-out LDA cross validation (repeating 10,000 times of permutation test). The analysis compared the data of PGx chip with data from Affymetrix SNP 6.0 microarray. Results: Genotyping results from custom PGx chip was compared to results from Affymetrix SNP 6.0 showing 94.33% of concordance rate. Among the 164,578 SNP markers included in the original design, 90,647 of them were finally chosen to generate reliable genotype calls. Additional SNP markers including missing genotypes were again removed before the construction of prediction model. Finally, the total number of available SNP markers was reduced to 37,676 for the analysis and model contruction. Max Test provided p-values by performing permutation test. Significant SNP markers with p-values less than 0.01 were chosen to construct a prediction model using leave-one-out LDA (linear discriminate analysis) method. The numbers of SNP markers were narrowed down as p-values became more significant (No. of SNPs in p-value): n=329 in p 〈 0.01; n=66 in p 〈 0.001; n=7 in p 〈 0.0001. The selection of SNP markers could be optimized and further narrowed down by extensive search. The accuracy of the model improved as more SNP markers were included in the model: the accuracy reaches 100% when N was 59. Followings are the example of the significant SNP markers included in the genetic predictive model for complete remission after induction therapy for AML-NK: CCDC93, LRP1B, LASS6, ATF2, and PDE11A on chr 2, PDE4D and PPP2R2B on chr 5, PARK2 on chr 6, PTPRD on chr 9, ABCC4 on chr 13, SLC25A21 on chr 14, ABCC1, PRKCB, ITGAX, and CNOT1 on chr 16, and other SNP markers. The biologic significances of these SNP markers are under investigation. Conclusion: The clinical relevance of the predictive model based on pharmacogenomic informations will be further clarified with external replication in the independent cohorts of AML. In patients with AML-NK which has diverse and heterogeneous clinical characteristics, the predictive model could identify non-responders who might benefit from alternative treatments prior to commencement of conventional induction therapy based on idarubicin plus cytarabine. In addition, it will also reduce the risk of adverse events in the non-responders and eventually improve overall survival in AML-NK. Disclosures: No relevant conflicts of interest to declare.
    Materialart: Online-Ressource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Sprache: Englisch
    Verlag: American Society of Hematology
    Publikationsdatum: 2010
    ZDB Id: 1468538-3
    ZDB Id: 80069-7
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 8
    In: Journal of Infection and Chemotherapy, Elsevier BV, Vol. 23, No. 11 ( 2017-11), p. 769-773
    Materialart: Online-Ressource
    ISSN: 1341-321X
    Sprache: Englisch
    Verlag: Elsevier BV
    Publikationsdatum: 2017
    ZDB Id: 1481768-8
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 9
    In: Electronics, MDPI AG, Vol. 9, No. 11 ( 2020-11-23), p. 1979-
    Kurzfassung: This study set out to invent an Information and Communication Technologies (ICT)-based smart Acer mono sap collection electric device to make efficient use of the labor force by reducing inefficient activities of old manual work to record sap exudation and state information. Based on the assumption that environmental information would have close connections with Acer mono sap exudation to reinforce the competitive edge of production in forest products, the study analyzed correlations between Acer mono sap exudation and environmental information and predicted Acer mono exudation. A smart collection of electric devices would gather data about Acer mono sap exudation per hour on outdoor temperature, humidity, conductivity, and wind direction and velocity, and was installed in four areas in the Republic of Korea, including Sancheong, Gwangyang, Geoje, and Inje. Collected data were used to analyze correlations between environmental information and Acer mono sap exudation using four different algorithms, including linear regression, Support Vector Machine (SVM), Artificial Neural Network (ANN), and random forest, to predict Acer mono sap exudation. Remarkable outcomes were obtained across all the algorithms except for linear regression, demonstrating close connections between environmental information and Acer mono sap exudation. The random forest model, which showed the most outstanding performance, was used to make a mobile app capable of providing predicted Acer mono sap exudation and collected environmental information.
    Materialart: Online-Ressource
    ISSN: 2079-9292
    Sprache: Englisch
    Verlag: MDPI AG
    Publikationsdatum: 2020
    ZDB Id: 2662127-7
    Standort Signatur Einschränkungen Verfügbarkeit
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  • 10
    Online-Ressource
    Online-Ressource
    MDPI AG ; 2021
    In:  Electronics Vol. 10, No. 19 ( 2021-10-02), p. 2407-
    In: Electronics, MDPI AG, Vol. 10, No. 19 ( 2021-10-02), p. 2407-
    Kurzfassung: There is no doubt that CNN has made remarkable technological developments as the core technology of computer vision, but the pooling technique used for CNN has its own issues. This study set out to solve the issues of the pooling technique by proposing conditional min pooling and a restructured convolutional neural network that improved the pooling structure to ensure efficient use of the conditional min pooling. Some Caltech 101 and crawling data were used to test the performance of the conditional min pooling and restructured convolutional neural network. The pooling performance test based on Caltech 101 increased in accuracy by 0.16~0.52% and decreased in loss by 19.98~28.71% compared with the old pooling technique. The restructured convolutional neural network did not have a big improvement in performance compared to the old algorithm, but it provided significant outcomes with similar performance results to the algorithm. This paper presents the results that the loss rate was reduced rather than the accuracy rate, and this result was achieved without the improvement of convolution.
    Materialart: Online-Ressource
    ISSN: 2079-9292
    Sprache: Englisch
    Verlag: MDPI AG
    Publikationsdatum: 2021
    ZDB Id: 2662127-7
    Standort Signatur Einschränkungen Verfügbarkeit
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