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  • 1
    In: BioMed Research International, Hindawi Limited, Vol. 2019 ( 2019-12-16), p. 1-7
    Abstract: ACTN4 , a gene which codes for the protein α -actinin-4, is critical for the maintenance of the renal filtration barrier. It is well known that ACTN4 mutations can lead to kidney dysfunction, such as familial focal segmental glomerulosclerosis (FSGS), a common cause of primary nephrotic syndrome (PNS). To elucidate whether other mutations of ACTN4 exist in PNS patients, we sequenced the ACTN4 gene in biopsies collected from 155 young PNS patients (≤16 years old). The patients were classified into five groups: FSGS, minimal change nephropathy, IgA nephropathy, membranous nephropathy, and those without renal puncture. Ninety-eight healthy people served as controls. Samples were subjected to Illumina’s next generation sequencing protocols using FastTarget target gene capture method. We identified 5 ACTN4 mutations which occurred only in PNS patients: c.1516G  〉  A (p.G506S) on exon 13 identified in two PNS patients, one with minimal change nephropathy and another without renal puncture; c.1442 + 10G  〉  A at the splice site in a minimal change nephropathy patient; c.2191-4G  〉  A at the cleavage site, identified from two FSGS patients; and c.1649A  〉  G (p.D550G) on exon 14 together with c.2191-4G  〉  A at the cleavage sites, identified from two FSGS patients. Among these, c.1649A  〉  G (p.D550G) is a novel ACTN4 mutation. Patients bearing the last two mutations exhibited resistance to clinical therapies.
    Type of Medium: Online Resource
    ISSN: 2314-6133 , 2314-6141
    Language: English
    Publisher: Hindawi Limited
    Publication Date: 2019
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  • 2
    In: E3S Web of Conferences, EDP Sciences, Vol. 271 ( 2021), p. 03036-
    Abstract: This study used the method of network pharmacology to preliminarily predict the mechanism of Heterophyllin B(HB) inhibiting Esophageal Cancer(EC). We found the HB targets in the TCMSP and PuChem databases, and searched all EC-related targets in the GeneCards database. Taken the intersection of HB and EC as potential targets for inhibiting EC, and used Cytoscape 3.7.1 software to perform topological analysis on potential targets to obtain core targets. Used the start Analysisi function in the DAVID database to analyzed the biological process of the core target, and visualized it with the the R language tool. As a result, 75 potential targets for inhibiting EC were obtained, of which MMP9, MMP2, CCND1, STAT3, CXCR4, BDKRB1and PTGS2 were the main core targets. HB inhibits the occurrence of EC through Pathways in cancer, TNF signaling pathway, Bladder cancer, Small cell lung cancer, Rheumatoid arthritis related pathways, mainly involving proteolysis, collagen catabolic process, extracellular matrix disassembly, positive regulation of cell proliferation, positive regulation of cytosolic calcium ion concentration biological processes. This study initially revealed the molecular mechanism of HB inhibiting EC, and provided a reference for HB to expand new indications.
    Type of Medium: Online Resource
    ISSN: 2267-1242
    Language: English
    Publisher: EDP Sciences
    Publication Date: 2021
    detail.hit.zdb_id: 2755680-3
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  • 3
    Online Resource
    Online Resource
    IOP Publishing ; 2021
    In:  Journal of Physics: Conference Series Vol. 2011, No. 1 ( 2021-09-01), p. 012062-
    In: Journal of Physics: Conference Series, IOP Publishing, Vol. 2011, No. 1 ( 2021-09-01), p. 012062-
    Abstract: This article mainly discusses the mechanism of SINOMENINE nanoparticles in the treatment of breast cancer by using the network pharmacology method. TCMSP and Swiss Target Prediction databases were searched for the target of SINOMENINE. The “breast cancer” target was searched through the GeneCards database. The common targets of both SINOMENINE and breast cancer were considered as the targets of SINOMENINE for treating breast cancer. The software Cytoscape 3.7.1 was used for topological analysis and visualization. The DAVID databases were used for GO enrichment analysis. A total of 57 key targets for the treatment of breast cancer were obtained, of which AKT1, MTOR, EGFR, NOS3, MAPK8, MMP9, etc. The results of pathway enrichment and functional annotation show that SINOMENINE mainly involves protein phosphorylation and positive regulation of nitric oxidebiosynthetic process by regulating Sphingolipid signaling pathway, Pathways in cancer, Measles, Smallcell lung cancer, Focal adhesion, and Insulin resistance. There are 10 major biological processes, including protein phosphorylation, signal transduction, negative regulation of apoptotic process, and protein autophosphorylation. This study not only initially revealed potential molecular mechanism of SINOMENINE, but also provided a reference for the in-depth development of SINOMENINE nanoparticles for the treatment of breast cancer.
    Type of Medium: Online Resource
    ISSN: 1742-6588 , 1742-6596
    Language: Unknown
    Publisher: IOP Publishing
    Publication Date: 2021
    detail.hit.zdb_id: 2166409-2
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  • 4
    In: Science in China Series D: Earth Sciences, Springer Science and Business Media LLC, Vol. 50, No. 7 ( 2007-6), p. 1052-1059
    Type of Medium: Online Resource
    ISSN: 1006-9313 , 1862-2801
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2007
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    detail.hit.zdb_id: 2142896-7
    SSG: 13
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  • 5
    In: Cancer Research, American Association for Cancer Research (AACR), Vol. 77, No. 13_Supplement ( 2017-07-01), p. 4607-4607
    Abstract: Purpose: Immunotherapies targeting immune checkpoint receptors have shown great promise for a subset of cancer patients; however, robust and safe combination therapies are still needed. In the tumor microenvironment, prostaglandin E2 receptor type 4 (EP4) signaling has been implicated in both protumoral myeloid cell differentiation and cytotoxic T cell exhaustion. We evaluated the combination of the EP4 antagonist E7046 (clinical trial NCT02540291) with anti-PD1 or anti-CTLA4 in preclinical tumor models, and also interrogated the relationship between PGE2 pathway activation and cancer patient survival. Materials/Methods: Mouse syngeneic tumor models CT-26 and 4T1 were used for pharmacological investigation. GMP grade E7046 was administered to tumor-bearing animals by oral gavage. Co-culture of EG7-OVA and OT1 cells in an antigen-specific cytotoxic T cell (CTL) activation assay provided mechanistic insights. For translational validation, transcripts of five major genes involved in PGE2 synthesis, transport and degradation were compared between malignant and normal tissues across all TCGA tumor types, and correlation of their expression with overall survival was assessed. Results: In the CT26 tumor model, the combination of E7046 and anti-PD1 resulted in significantly more tumor-free animals compared with either agent alone. In the 4T1 tumor model, the combination of E7046 and anti-CTLA4 was also more effective in suppressing tumor growth and tumor rejection compared with anti-CTLA4 alone, and was accompanied by a markedly increased accumulation of GZMB+CD8T+ CTLs in the treated tumors. Consistent with those findings, addition of anti-PD1 antibody promoted OVA-specific CTL activation in vitro while addition of PGE2 strongly inhibited it, as measured by IFNγ secretion. Inclusion of E7046 dose-dependently reversed the PGE2-induced suppressive activity in the presence of anti-PD1 antibody. Among major human PGE2 pathway genes, TCGA analysis showed that PTGES1 was upregulated and HPGD downregulated across a broad range of tumor types. In contrast, COX1, COX2 and PGT showed less difference between malignant and normal tissues. Importantly, these differences of one or multiple PGE2 pathway genes were strongly associated with patient survival in certain cancer types. Conclusions: A subset of human cancer types displays upregulated PGE2 pathway that is associated with a poorer prognosis. PGE2-EP4 signaling potently suppresses antigen-specific CTL activation in the presence of PD1 signaling blockade. The combination of EP4 antagonist E7046 with either anti-PD1 or anti-CTLA4 demonstrated superior anti-tumor activity compared with anti-PD1 or anti-CTLA4 alone. This increased activity was accompanied by increased CTL activation. Citation Format: Diana I. Albu, David Verbel, Yuan Huang, Donna Kolber-Simonds, Zichun Wang, Xulong Wang, Zoltan Dezso, Christy Ingersoll, Kuan-Chun Huang, Janna Hutz, Mary Woodall-Jappe, Xingfeng Bao. Specific inhibition of PGE2-EP4 signaling by E7046 promotes anti-tumor activity of checkpoint blockade agents through boosting cytotoxic T cell activity [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017; 2017 Apr 1-5; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2017;77(13 Suppl):Abstract nr 4607. doi:10.1158/1538 -7445.AM2017-4607
    Type of Medium: Online Resource
    ISSN: 0008-5472 , 1538-7445
    RVK:
    RVK:
    Language: English
    Publisher: American Association for Cancer Research (AACR)
    Publication Date: 2017
    detail.hit.zdb_id: 2036785-5
    detail.hit.zdb_id: 1432-1
    detail.hit.zdb_id: 410466-3
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  • 6
    In: Geology, Geological Society of America, Vol. 35, No. 12 ( 2007), p. 1083-
    Type of Medium: Online Resource
    ISSN: 0091-7613
    Language: English
    Publisher: Geological Society of America
    Publication Date: 2007
    detail.hit.zdb_id: 184929-3
    detail.hit.zdb_id: 2041152-2
    SSG: 13
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  • 7
    In: Genes, Brain and Behavior, Wiley, Vol. 18, No. 4 ( 2019-04)
    Abstract: Schizophrenia (SCZ) and bipolar disorder (BD) are two major neuropsychiatric diseases that are the most substantial causes of disability and mortality worldwide. CTNNB1 encodes beta‐catenin, an important protein in canonical Wnt signaling. We aimed to investigate the association between the rs2953 of CTNNB1 and the risk of SCZ and BD and to further explore the function of rs2953. A total of 1658 samples (548 SCZ cases, 512 BD cases, and 598 controls) were examined in terms of the genotype of CTNNB1 rs2953. The mRNA expression level of CTNNB1 significantly increased in the SCZ and BD groups compared with that in the control group. Significant association remained between CTNNB1 3′‐untranslated region (UTR) variant rs2953 and SCZ susceptibility (additive and dominant model) after gender and age were adjusted. rs2953 disrupted the binding of CTNNB1 and miR‐485. miR‐485 significantly suppressed the luciferase activity of CTNNB1 ‐T vector by binding to the CTNNB1 3′‐UTR containing the T allele of rs2953. The mRNA expression of CTNNB1 can be used as a biomarker for the diagnosis of SCZ and BD. The 3′‐UTR variant rs2953 in CTNNB1 influences the risk of SCZ in the Han Chinese population and modifies the binding of miR‐485 to CTNNB1 .
    Type of Medium: Online Resource
    ISSN: 1601-1848 , 1601-183X
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2019
    detail.hit.zdb_id: 2061212-6
    SSG: 12
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  • 8
    Online Resource
    Online Resource
    IOP Publishing ; 2021
    In:  Journal of Physics: Conference Series Vol. 2011, No. 1 ( 2021-09-01), p. 012064-
    In: Journal of Physics: Conference Series, IOP Publishing, Vol. 2011, No. 1 ( 2021-09-01), p. 012064-
    Abstract: This article preliminarily revealed the mechanism of andrographolide (AD) nanoemulsifying inhibiting gastric cancer(GC). The targets of AD was searched by TCMSP and SwissTargetPrediction database, we entered the keyword “Gastric Cancer” in GeneCards database to find all targets related to GC. The intersection of AD and GC is taken as an important targets for AD to act on GC, Cytoscape 3.7.1 was used for topological analysis of the target, so as to obtain all important targets for AD to inhibit GC. DAVID database was used to perform biological process analysis on all potential targets, mainly through its analysis function. It involves Cell composition, molecular function and signal pathway enrichment analysis. Finally, we obtained a total of 53 potential targets related to GC, among which IL6, MAPK8, CREBBP, CDK2, MAPK14, AR and MAP2K1 may be important targets for inhibiting GC. The effect of AD on GC is mainly through Influenza A, Pathways in cancer, Sphingolipid signaling pathway, Progesterone-mediated oocyte maturation, Herpes simplex infection and other important pathways which are closely related to 10 biological processes such as protein phosphorylation, signal transduction, peptidyl-serine phosphorylation, positive regulation of gene expression, and positive regulation of transcription from RNA polymerase II promoter Sex. This study can provide guidance for the development of anti-GC drugs.
    Type of Medium: Online Resource
    ISSN: 1742-6588 , 1742-6596
    Language: Unknown
    Publisher: IOP Publishing
    Publication Date: 2021
    detail.hit.zdb_id: 2166409-2
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  • 9
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2019
    In:  Journal of Molecular Neuroscience Vol. 68, No. 4 ( 2019-8), p. 679-687
    In: Journal of Molecular Neuroscience, Springer Science and Business Media LLC, Vol. 68, No. 4 ( 2019-8), p. 679-687
    Type of Medium: Online Resource
    ISSN: 0895-8696 , 1559-1166
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2019
    detail.hit.zdb_id: 2071508-0
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  • 10
    In: E3S Web of Conferences, EDP Sciences, Vol. 271 ( 2021), p. 03078-
    Abstract: To explore the potential molecular mechanism of Oxoglaucine(OG) in the treatment of Breast Cancer(BC) based on network pharmacology and bioinformatics. TCMSP and SwissTargetPrediction databases search for OG Related targets, and GeneCards database finds all BC-related targets. Take the intersection of OG and BC as all potential targets that inhibit BC. All potential targets are topologically analyzed by Cytoscape 3.7.1 software, and finally the core target is obtained. The start analysisi function in the DAVID database performs bioinformatics analysis on all core targets, and further visualizes them with the help of R language tools. As a result, 104 potential targets were obtained, of which SRC, PIK3CA, EGFR, MTOR, ESR1, MAPK1, PTGS2, AR, and NOS3 were the main core targets. OG inhibits the occurrence of BC through Pathways in cancer, PI3K-Akt signaling pathway, Proteoglycans in cancer, ErbB signaling pathway, HIF-1 signaling pathway related pathways, mainly involving signal transduction, protein phosphorylation, negative regulation of apoptotic process, positive regulation of transcription from RNA polymerase II promoter, phosphatidylinositol-mediated signaling biological processes. This study initially reveals the molecular mechanism of OG inhibiting BC, which provides a reference for further research.
    Type of Medium: Online Resource
    ISSN: 2267-1242
    Language: English
    Publisher: EDP Sciences
    Publication Date: 2021
    detail.hit.zdb_id: 2755680-3
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