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  • 1
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2021
    In:  Journal of Soil Science and Plant Nutrition Vol. 21, No. 3 ( 2021-09), p. 2115-2123
    In: Journal of Soil Science and Plant Nutrition, Springer Science and Business Media LLC, Vol. 21, No. 3 ( 2021-09), p. 2115-2123
    Type of Medium: Online Resource
    ISSN: 0718-9508 , 0718-9516
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2021
    detail.hit.zdb_id: 2611093-3
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  • 2
    Online Resource
    Online Resource
    SAGE Publications ; 2023
    In:  Bioinformatics and Biology Insights Vol. 17 ( 2023-01)
    In: Bioinformatics and Biology Insights, SAGE Publications, Vol. 17 ( 2023-01)
    Abstract: The ecological deterioration caused by the continuous and excessive use of synthetic inputs in agriculture has prompted the search for environmentally favorable resources for crop production. Many have advocated for the use of soils from termite mounds to improve soil and plant health; therefore, the purpose of this study was to characterize the microbiome multifunctionalities that are important for plant health and growth in termite mound soil. The metagenomics of soil from termite mounds revealed taxonomic groups with functional potentials associated with promoting the growth and health of plants in nutrient-poor, virtually dry environments. Analysis of microorganisms revealed that Proteobacteria dominated the soil of termite colonies, while Actinobacteria ranked second. The predominance of Proteobacteria and Actinobacteria, the well-known antibiotic-producing populations, indicates that the termite mound soil microbiome possesses metabolic resistance to biotic stresses. Functions recognized for diverse proteins and genes unveiled that a multi-functional microbiome carry out numerous metabolic functions including virulence, disease, defense, aromatic compound and iron metabolism, secondary metabolite synthesis, and stress response. The abundance of genes in termite mound soils associated with these prominent functions could unquestionably validate the enhancement of plants in abiotic and biotically stressed environments. This study reveals opportunities to revisit the multifunctionalities of termite mound soils in order to establish a connection between taxonomic diversity, targeted functions, and genes that could improve plant yield and health in unfavorable soil conditions.
    Type of Medium: Online Resource
    ISSN: 1177-9322 , 1177-9322
    Language: English
    Publisher: SAGE Publications
    Publication Date: 2023
    detail.hit.zdb_id: 2423808-9
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  • 3
    In: Data in Brief, Elsevier BV, Vol. 28 ( 2020-02), p. 104916-
    Type of Medium: Online Resource
    ISSN: 2352-3409
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2020
    detail.hit.zdb_id: 2786545-9
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  • 4
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2020
    In:  Archives of Microbiology Vol. 202, No. 10 ( 2020-12), p. 2697-2709
    In: Archives of Microbiology, Springer Science and Business Media LLC, Vol. 202, No. 10 ( 2020-12), p. 2697-2709
    Type of Medium: Online Resource
    ISSN: 0302-8933 , 1432-072X
    RVK:
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2020
    detail.hit.zdb_id: 1458451-7
    detail.hit.zdb_id: 477-7
    detail.hit.zdb_id: 124824-8
    SSG: 12
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  • 5
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2019
    In:  Annals of Microbiology Vol. 69, No. 3 ( 2019-3), p. 211-219
    In: Annals of Microbiology, Springer Science and Business Media LLC, Vol. 69, No. 3 ( 2019-3), p. 211-219
    Type of Medium: Online Resource
    ISSN: 1590-4261 , 1869-2044
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2019
    detail.hit.zdb_id: 2143009-3
    SSG: 12
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  • 6
    In: Microorganisms, MDPI AG, Vol. 11, No. 8 ( 2023-08-03), p. 2003-
    Abstract: Plant roots host numerous microorganisms around and inside their roots, forming a community known as the root microbiome. An increasing bulk of research is underlining the influences root-associated microbial communities can have on plant health and development. However, knowledge on how plant roots and their associated microbes interact to bring about crop growth and yield is limited. Here, we presented (i) the communication strategies between plant roots and root-associated microbes and (ii) the applications of plant root-associated microbes in enhancing plant growth and yield. This review has been divided into three main sections: communications between root microbiome and plant root; the mechanism employed by root-associated microbes; and the chemical communication mechanisms between plants and microbes and their application in plant growth and yield. Understanding how plant root and root-associated microbes communicate is vital in designing ecofriendly strategies for targeted disease suppression and improved plant growth that will help in sustainable agriculture. Ensuring that plants become healthy and productive entails keeping plants under surveillance around the roots to recognize disease-causing microbes and similarly exploit the services of beneficial microorganisms in nutrient acquisition, stress mitigation, and growth promotion.
    Type of Medium: Online Resource
    ISSN: 2076-2607
    Language: English
    Publisher: MDPI AG
    Publication Date: 2023
    detail.hit.zdb_id: 2720891-6
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  • 7
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2020
    In:  Journal of Soil Science and Plant Nutrition Vol. 20, No. 2 ( 2020-06), p. 421-430
    In: Journal of Soil Science and Plant Nutrition, Springer Science and Business Media LLC, Vol. 20, No. 2 ( 2020-06), p. 421-430
    Type of Medium: Online Resource
    ISSN: 0718-9508 , 0718-9516
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2020
    detail.hit.zdb_id: 2611093-3
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  • 8
    In: Annals of Microbiology, Springer Science and Business Media LLC, Vol. 71, No. 1 ( 2021-12)
    Abstract: Incidence of foodborne diseases and growing resistance of pathogens to classical antibiotics is a major concern in the food industry. Consequently, there is increasing demand for safe foods with fewer chemical additives but natural products which are not harmful to the consumers. Bacteriocins, produced by lactic acid bacteria (LAB), is of interest because they are active in a nanomolar range, do not have toxic effects, and are readily available in fermented food products. Methods In this research, LAB were isolated from fufu , gari , kunu , nono , and ogi using De Mann, Rogosa, and Sharpe agar. Cell-free supernatants were prepared from 18-24 h LAB culture grown on MRS broth. Effect of organic acid was eliminated by adjusting the pH of the supernatants to 7.0 with 1M NaOH while the effect of hydrogen peroxide was eliminated by treating with Catalase enzyme. The supernatant was then filter-sterilized using a membrane filtration unit with a 0.2-μm pore size millipore filter and subjected to agar well diffusion assay against foodborne antibiotic-resistant bacteria. Result A total of 162 isolates were obtained from the food samples. The antimicrobial sensitivity test yielded positive results for 45 LAB isolates against Staphylococcus aureus ATCC 25923 while 52 LAB isolates inhibited Escherichia coli ATCC 25922 . On confirmation of the bacteriocinogenic nature of the inhibitory substance, 4 of the LAB isolates displayed a remarkable degree of inhibition to Leuconostoc mesenteroides , Salmonella typhimurium , and Bacillus cereus. Agar well diffusion assay was also performed against antibiotic-resistant foodborne pathogens using the cell-free supernatant (CFS) obtained from Lactobacillus fermentum strain NBRC15885 ( Limosilactobacillus fermentum ), Lactobacillus fermentum strain CIP102980 ( Limosilactobacillus fermentum ), Lactobacillus plantarum strain JCM1149 ( Lactiplantibacillus garii ), and Lactobacillus natensis strain LP33 ( Companilactobacillus nantensis ). The foodborne pathogens exhibited a notable level of resistance to antibiotics, with B. cereus exhibiting a resistance profile of 40%, S. aureus (50%), K. pnuemoniae (70%), E. coli (60%), and S. typhi (40%). The (CFS) was able to inhibit the growth of B. cereus , Klebsiella pneumonia , S. typhimurium , S. aureus , and E. coli. Conclusion Therefore, it portends that the bacteriocins produced by the LAB isolated from these food products could act as probiotics for effective inhibition of the growth of antibiotic-resistant foodborne pathogens.
    Type of Medium: Online Resource
    ISSN: 1590-4261 , 1869-2044
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2021
    detail.hit.zdb_id: 2143009-3
    SSG: 12
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  • 9
    In: Biology, MDPI AG, Vol. 9, No. 6 ( 2020-06-25), p. 136-
    Abstract: Recent studies involving microbial communities in termite mounds have been more focused on bacteria and fungi with little attention given to archaea, which play significant roles in nutrient cycling. Thus, we aimed at characterizing the archaeal taxonomic and functional diversity in two termite mound soils using the shotgun sequencing method with the assumption that termite activities could promote archaeal diversity. Our findings showed that termite mound soils have archaeal groups that are taxonomically different from their surrounding soils, with Euryarchaeota, Korarchaeota, and Nanoarchaeota being predominant while Thaumarchaeota and Crenarchaeota were predominant in the surrounding soils. Additionally, the observed nutrient pathways: phosphorus, nitrogen, and sulfur were all significantly more predominant in termite mound soils than in their comparative surrounding soils. Alpha diversity showed that archaea were not significantly different within termite mound soils and the surrounding soils. The beta diversity revealed significant differences in the archaeal taxonomic composition and their functional categories between the termite mounds and surrounding soils. Our canonical correspondence analysis revealed that the distribution of archaeal communities was likely dependent on the soil properties. Our results suggested that termite activities may promote the diversity of archaea; with some of our sequences grouped as unclassified archaea, there is a need for further research to unveil their identity.
    Type of Medium: Online Resource
    ISSN: 2079-7737
    Language: English
    Publisher: MDPI AG
    Publication Date: 2020
    detail.hit.zdb_id: 2661517-4
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  • 10
    Online Resource
    Online Resource
    Hindawi Limited ; 2022
    In:  Applied and Environmental Soil Science Vol. 2022 ( 2022-5-30), p. 1-9
    In: Applied and Environmental Soil Science, Hindawi Limited, Vol. 2022 ( 2022-5-30), p. 1-9
    Abstract: Background. Soil invertebrates are a significant part of the functioning and biodiversity of engineered soil. Nevertheless, it remains unclear how termite bioturbation that promotes soil nutrients affects the diversity and composition of invertebrates that dwell in soils from termite mounds. Therefore, we tested the premise that the rich nutrients accrued in soils from termite mounds encourage a complex variety of soil invertebrates. Methods. Whole DNA was extracted from soils from termite mounds and adjacent soils that were 10 m away from the mound. The soil samples were then sequenced using metagenomics. Results. Disparity in the composition of the soil invertebrate communities between the termite mound and their adjacent soils was clear from the results. Also, principal coordinate analysis showed that the structure of the soil invertebrate communities in termite mound soils was distinctive from that of the adjacent soils. The canonical correspondence analysis showed that phosphorus, soil pH, and soil organic carbon were the environmental factors that significantly explained the variation in the composition and diversity of the soil invertebrate communities between the two habitats. Conclusion. Metagenomics and chemical analysis jointly offered a route to examine the compositional and diversity variations in soil invertebrate communities in relation to termite bioturbation.
    Type of Medium: Online Resource
    ISSN: 1687-7675 , 1687-7667
    Language: English
    Publisher: Hindawi Limited
    Publication Date: 2022
    detail.hit.zdb_id: 2467232-4
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