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  • 1
    Online Resource
    Online Resource
    Society of Exploration Geophysicists ; 2023
    In:  GEOPHYSICS
    In: GEOPHYSICS, Society of Exploration Geophysicists
    Abstract: Full waveform inversion (FWI) is a useful tool for estimating the properties of subsurface media, but has the disadvantage of incurring considerable computing costs. Therefore, we propose a method for reducing the computing memory requirement in the time domain of FWI that employs a new approach with discrete cosine transform (DCT) and the Nyquist sampling theorem. The proposed method enables accurate reconstruction of a wavefield with several optimal DCT coefficients derived by considering the maximum wavenumber component of the virtual source wavefield and the maximum frequency of the source wavelet. Consequently, virtual source wavefields can be stored in a computers memory instead of on a disk. Our proposed FWI algorithm was compared to existing compression methods that use DCT and wavelet transform (WT) in a numerical example. The results of this comparison demonstrated that our algorithm provides significantly improved computational efficiency.
    Type of Medium: Online Resource
    ISSN: 0016-8033 , 1942-2156
    RVK:
    Language: English
    Publisher: Society of Exploration Geophysicists
    Publication Date: 2023
    detail.hit.zdb_id: 2033021-2
    detail.hit.zdb_id: 2184-2
    SSG: 16,13
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  • 2
    Online Resource
    Online Resource
    Microbiology Society ; 2022
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 72, No. 1 ( 2022-01-19)
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 72, No. 1 ( 2022-01-19)
    Abstract: A strictly aerobic, Gram-stain-negative, gliding, rod-shaped bacteria, designated strain S481 T , was isolated from a surface seawater sample collected at Gunsan marina, in the West Sea of the Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain S481 T formed a monophyletic clade with members of the genus Fulvivirga , showing 93.7–95.8% sequence similarity to the type strains. Strain S481 T has a single circular chromosome of 4.13 Mbp with a DNA G+C content of 37.3 mol%. The values of average nucleotide identity, average amino acid identity and digital DNA–DNA hybridization between strain S481 T and all genome-sequenced species of the genus Fulvivirga were below 71.2%, 68.6% and 18.9%, respectively, indicating lower values than the standard cut-offs for species delineation. Growth was observed at 20–42 °C (optimum, 37 °C), at pH 6–8 (optimum, pH 7) and with 0 – 6 % NaCl (optimum, 1–2 %). The major fatty acids ( 〉 10%) were iso-C 15:0 , iso-C 15:1 G and C 16:1 ω5 c . The respiratory quinone was MK-7. The major polar lipids were identified as phosphatidylethanolamine, three unidentified aminolipids and five unidentified lipids. Based on the results of phenotypic characterization, phylogenetic analysis and genome-based comparison, strain S481 T represents a novel species in the genus Fulvivirga , for which we propose the name Fulvivirga lutea sp. nov. The type strain is S481 T (=KCTC 82209 T =JCM 34505 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2022
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 3
    Online Resource
    Online Resource
    Microbiology Society ; 2023
    In:  International Journal of Systematic and Evolutionary Microbiology Vol. 73, No. 9 ( 2023-09-26)
    In: International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, Vol. 73, No. 9 ( 2023-09-26)
    Abstract: A Gram-negative, pale yellow-pigmented, non-flagellated, motile, rod-shaped and aerobic bacterium, designated strain PG104 T , was isolated from red algae Grateloupia sp. collected from the coastal area of Pohang, Republic of Korea. Growth of strain PG104 T was observed at 15–35 °C (optimum, 30 °C), pH 6.0–10.0 (optimum, pH 7.5–8.0) and in the presence of 0–8.0 % (w/v) NaCl (optimum, 5.0 %). The predominant fatty acids included C 17 : 0 , C 18 : 0 , 11-methyl C 18 : 1  ω 7 c and summed feature 8 (C 18 : 1  ω 7 c and/or C 18 : 1  ω 6 c ) and the major respiratory quinone was Q-10. Polar lipids included phosphatidylethanolamine, phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, one unidentified lipid and one unidentified aminolipid. Phylogenetic analysis based on the 16S rRNA gene sequences indicated that strain PG104 T formed a phylogenetic lineage with members of the genus Falsirhodobacter and exhibited 16S rRNA gene sequence similarities of 97.1 and 96.6 % to Falsirhodobacter deserti W402 T and Falsirhodobacter halotolerans JA744 T , respectively. The complete genome of strain PG104 T consisted of a single circular chromosome of approximately 2.8 Mbp with five plasmids. Based on polyphasic taxonomic data, strain PG104 T represents a novel species in the genus Falsirhodobacter , for which the name Falsirhodobacter algicola sp. nov. is proposed. The type strain of Falsirhodobacter algicola is PG104 T (=KCTC 82230 T =JCM 34380 T ).
    Type of Medium: Online Resource
    ISSN: 1466-5026 , 1466-5034
    Language: English
    Publisher: Microbiology Society
    Publication Date: 2023
    detail.hit.zdb_id: 215062-1
    detail.hit.zdb_id: 2056611-6
    SSG: 12
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  • 4
    Online Resource
    Online Resource
    American Society for Microbiology ; 2008
    In:  Infection and Immunity Vol. 76, No. 7 ( 2008-07), p. 3214-3220
    In: Infection and Immunity, American Society for Microbiology, Vol. 76, No. 7 ( 2008-07), p. 3214-3220
    Abstract: Oxygenated fatty acids, or oxylipins, play an essential role in physiological signaling and developmental processes in animals, plants, and fungi. Previous characterization of three Aspergillus fumigatus dioxygenases (PpoA, PpoB, and PpoC), similar in sequence to mammalian cyclooxygenases, showed that PpoA is responsible for the production of the oxylipins 8 R -hydroperoxyoctadecadienoic acid and 5 S ,8 R -dihydroxy-9 Z ,12 Z -octadecadienoic acid and that PpoC is responsible for 10 R -hydroxy-8 E ,12 Z -hydroperoxyoctadecadienoic acid. Here, Δ ppo mutants were characterized to elucidate the role of fungal dioxygenases in A. fumigatus development and host interactions. The Δ ppoC strain displayed distinct phenotypes compared to those of other Δ ppo mutants and the wild type, including altered conidium size, germination, and tolerance to oxidative stress as well as increased uptake and killing by primary alveolar macrophages. These experiments implicate oxylipins in pathogen development and suggest that Δ ppoC represents a useful model for studying the A. fumigatus -host interaction.
    Type of Medium: Online Resource
    ISSN: 0019-9567 , 1098-5522
    RVK:
    Language: English
    Publisher: American Society for Microbiology
    Publication Date: 2008
    detail.hit.zdb_id: 1483247-1
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  • 5
    Online Resource
    Online Resource
    American Chemical Society (ACS) ; 2011
    In:  Journal of the American Chemical Society Vol. 133, No. 25 ( 2011-06-29), p. 9678-9681
    In: Journal of the American Chemical Society, American Chemical Society (ACS), Vol. 133, No. 25 ( 2011-06-29), p. 9678-9681
    Type of Medium: Online Resource
    ISSN: 0002-7863 , 1520-5126
    RVK:
    Language: English
    Publisher: American Chemical Society (ACS)
    Publication Date: 2011
    detail.hit.zdb_id: 1472210-0
    detail.hit.zdb_id: 3155-0
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  • 6
    Online Resource
    Online Resource
    Korean Academy of Rehabilitation Medicine ; 2022
    In:  Annals of Rehabilitation Medicine Vol. 46, No. 6 ( 2022-12-31), p. 292-302
    In: Annals of Rehabilitation Medicine, Korean Academy of Rehabilitation Medicine, Vol. 46, No. 6 ( 2022-12-31), p. 292-302
    Abstract: Objective To prove the hypothesis that the parameters of intraoperative neurophysiological monitoring (IONM) during will be more deteriorated in neuromuscular scoliosis (NMS) than in adolescent idiopathic scoliosis (AIS).Methods This retrospective study reviewed the data of 69 patients (NMS=32, AIS=37) who underwent scoliosis surgery under IONM. The amplitude of motor evoked potentials (MEPs), and the amplitude and the latency of somatosensory evoked potentials (SEPs) were examined. Demographic, preoperative, perioperative and postoperative data were analyzed to determine whether they affected the IONM parameters for each group.Results Of the items analyzed, the bleeding amount was the only significant risk factor for SEP latency deterioration in the NMS group only. The amplitude of SEP and MEP did not correlate with the hemodynamic parameters. The NMS/AIS ratios of the bleeding-related parameters were higher in the order of bleeding amount/weight (2.62, p 〈 0.01), bleeding amount/body mass index (2.13, p 〈 0.01), and bleeding amount (1.56, p 〈 0.01). This study suggests that SEP latency is more vulnerable than SEP or MEP amplitude in ischemic conditions during scoliosis surgery.Conclusion In NMS patients, it should be considered that the bleeding amount can have a critical effect on intraoperative electrophysiological deterioration.
    Type of Medium: Online Resource
    ISSN: 2234-0645 , 2234-0653
    Language: English
    Publisher: Korean Academy of Rehabilitation Medicine
    Publication Date: 2022
    detail.hit.zdb_id: 2659431-6
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  • 7
    Online Resource
    Online Resource
    Journal of Advanced Marine Engineering and Technology ; 2019
    In:  Journal of the Korean Society of Marine Engineering Vol. 43, No. 4 ( 2019-05-31), p. 328-334
    In: Journal of the Korean Society of Marine Engineering, Journal of Advanced Marine Engineering and Technology, Vol. 43, No. 4 ( 2019-05-31), p. 328-334
    Type of Medium: Online Resource
    ISSN: 2234-7925 , 2234-8352
    Uniform Title: 소나방정식 기반의 초음파카메라 모델링 알고리즘 개발
    Language: English
    Publisher: Journal of Advanced Marine Engineering and Technology
    Publication Date: 2019
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  • 8
    Online Resource
    Online Resource
    Society of Chung-Ang Language and Literature ; 2020
    In:  The Journal of Language & Literature Vol. 84 ( 2020-12-31), p. 419-447
    In: The Journal of Language & Literature, Society of Chung-Ang Language and Literature, Vol. 84 ( 2020-12-31), p. 419-447
    Type of Medium: Online Resource
    ISSN: 1229-6406
    Uniform Title: 재외동포 아동 대상 한국어 문식성 향상 방안 - 학습 한국어 교육을 중심으로
    Language: English
    Publisher: Society of Chung-Ang Language and Literature
    Publication Date: 2020
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  • 9
    Online Resource
    Online Resource
    Springer Science and Business Media LLC ; 2021
    In:  BMC Genomics Vol. 22, No. 1 ( 2021-12)
    In: BMC Genomics, Springer Science and Business Media LLC, Vol. 22, No. 1 ( 2021-12)
    Abstract: Trichoderma is a genus of fungi in the family Hypocreaceae and includes species known to produce enzymes with commercial use. They are largely found in soil and terrestrial plants. Recently, Trichoderma simmonsii isolated from decaying bark and decorticated wood was newly identified in the Harzianum clade of Trichoderma . Due to a wide range of applications in agriculture and other industries, genomes of at least 12 Trichoderma spp. have been studied. Moreover, antifungal and enzymatic activities have been extensively characterized in Trichoderma spp. However, the genomic information and bioactivities of T. simmonsii from a particular marine-derived isolate remain largely unknown. While we screened for asparaginase-producing fungi, we observed that T. simmonsii GH-Sj1 strain isolated from edible kelp produced asparaginase. In this study, we report a draft genome of T. simmonsii GH-Sj1 using Illumina and Oxford Nanopore technologies. Furthermore, to facilitate biotechnological applications of this species, RNA-sequencing was performed to elucidate the transcriptional profile of T. simmonsii GH-Sj1 in response to asparaginase-rich conditions. Results We generated ~ 14 Gb of sequencing data assembled in a ~ 40 Mb genome. The T. simmonsii GH-Sj1 genome consisted of seven telomere-to-telomere scaffolds with no sequencing gaps, where the N50 length was 6.4 Mb. The total number of protein-coding genes was 13,120, constituting ~ 99% of the genome. The genome harbored 176 tRNAs, which encode a full set of 20 amino acids. In addition, it had an rRNA repeat region consisting of seven repeats of the 18S-ITS1–5.8S-ITS2–26S cluster. The T. simmonsii genome also harbored 7 putative asparaginase-encoding genes with potential medical applications. Using RNA-sequencing analysis, we found that 3 genes among the 7 putative genes were significantly upregulated under asparaginase-rich conditions. Conclusions The genome and transcriptome of T. simmonsii GH-Sj1 established in the current work represent valuable resources for future comparative studies on fungal genomes and asparaginase production.
    Type of Medium: Online Resource
    ISSN: 1471-2164
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2021
    detail.hit.zdb_id: 2041499-7
    SSG: 12
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  • 10
    In: BMC Cancer, Springer Science and Business Media LLC, Vol. 21, No. 1 ( 2021-12)
    Abstract: Cancer stem cells (CSCs) are implicated in carcinogenesis, cancer progression, and recurrence. Several biomarkers have been described for pancreatic ductal adenocarcinoma (PDAC) CSCs; however, their function and mechanism remain unclear. Method In this study, secretome analysis was performed in pancreatic CSC-enriched spheres and control adherent cells for biomarker discovery. Glutaredoxin3 (GLRX3), a novel candidate upregulated in spheres, was evaluated for its function and clinical implication. Results PDAC CSC populations, cell lines, patient tissues, and blood samples demonstrated GLRX3 overexpression. In contrast, GLRX3 silencing decreased the in vitro proliferation, migration, clonogenicity, and sphere formation of cells. GLRX3 knockdown also reduced tumor formation and growth in vivo. GLRX3 was found to regulate Met/PI3K/AKT signaling and stemness-related molecules. ELISA results indicated GLRX3 overexpression in the serum of patients with PDAC compared to that in healthy controls. The sensitivity and specificity of GLRX3 for PDAC diagnosis were 80.0 and 100%, respectively. When GLRX3 and CA19–9 were combined, sensitivity was significantly increased to 98.3% compared to that with GLRX3 or CA19–9 alone. High GLRX3 expression was also associated with poor disease-free survival in patients receiving curative surgery. Conclusion Overall, these results indicate GLRX3 as a novel diagnostic marker and therapeutic target for PDAC targeting CSCs.
    Type of Medium: Online Resource
    ISSN: 1471-2407
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 2021
    detail.hit.zdb_id: 2041352-X
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