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  • 11
    In: Diabetologia, Springer Science and Business Media LLC, Vol. 42, No. S1 ( 1999-8), p. A1-A330
    Type of Medium: Online Resource
    ISSN: 0012-186X , 1432-0428
    RVK:
    Language: English
    Publisher: Springer Science and Business Media LLC
    Publication Date: 1999
    detail.hit.zdb_id: 1458993-X
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  • 12
    In: Genetic Epidemiology, Wiley, Vol. 43, No. 7 ( 2019-10), p. 844-863
    Abstract: Epidemiologic studies show an increased risk of non‐Hodgkin lymphoma (NHL) in patients with autoimmune disease (AD), due to a combination of shared environmental factors and/or genetic factors, or a causative cascade: chronic inflammation/antigen‐stimulation in one disease leads to another. Here we assess shared genetic risk in genome‐wide‐association‐studies (GWAS). Secondary analysis of GWAS of NHL subtypes (chronic lymphocytic leukemia, diffuse large B‐cell lymphoma, follicular lymphoma, and marginal zone lymphoma) and ADs (rheumatoid arthritis, systemic lupus erythematosus, and multiple sclerosis). Shared genetic risk was assessed by (a) description of regional genetic of overlap, (b) polygenic risk score (PRS), (c)"diseasome", (d)meta‐analysis. Descriptive analysis revealed few shared genetic factors between each AD and each NHL subtype. The PRS of ADs were not increased in NHL patients (nor vice versa). In the diseasome, NHLs shared more genetic etiology with ADs than solid cancers ( p  = .0041). A meta‐analysis (combing AD with NHL) implicated genes of apoptosis and telomere length. This GWAS‐based analysis four NHL subtypes and three ADs revealed few weakly‐associated shared loci, explaining little total risk. This suggests common genetic variation, as assessed by GWAS in these sample sizes, may not be the primary explanation for the link between these ADs and NHLs.
    Type of Medium: Online Resource
    ISSN: 0741-0395 , 1098-2272
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2019
    detail.hit.zdb_id: 1492643-X
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  • 13
    In: Conservation Letters, Wiley, Vol. 14, No. 5 ( 2021-09)
    Abstract: The new global biodiversity framework (GBF) being developed under the Convention on Biological Diversity must drive action to reverse the ongoing decline of the Earth's biodiversity. Explicit, measurable goals that specify the outcomes we want to achieve are needed to set the course for this action. However, the current draft goals and targets fail to set out these clear outcomes. We argue that distinct outcome goals for species, ecosystems, and genetic diversity are essential and should specify net outcomes required for each. Net outcome goals such as “no net loss” do, however, have a controversial history, and loose specification can lead to perverse outcomes. We outline seven general principles to underpin net outcome goal setting that minimize risk of such perverse outcomes. Finally, we recommend inclusion of statements of impact in action targets that support biodiversity goals, and we illustrate the importance of this with an example from the draft GBF action targets. These modifications would help reveal the specific contribution each action would make to achieving the outcome goals and provide clarity on whether the successful achievement of action targets would be adequate to achieve the outcome goals and, in turn, the 2050 vision: living in harmony with nature .
    Type of Medium: Online Resource
    ISSN: 1755-263X , 1755-263X
    URL: Issue
    Language: English
    Publisher: Wiley
    Publication Date: 2021
    detail.hit.zdb_id: 2430375-6
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  • 14
    In: Blood, American Society of Hematology, Vol. 122, No. 21 ( 2013-11-15), p. 1614-1614
    Abstract: In chronic lymphocytic leukemia (CLL), genomic aberrations identify subgroups of patients with distinct treatment outcomes. In particular, patients with deletion of chromosome 17p and/or TP53 gene mutations have inferior prognosis with standard therapy. Hence, screening for these abnormalities is mandatory prior to enrolling patients in clinical trials (CT) and can be also useful in general practice (GP). Recent studies suggest that aberrant p53 function (p53ab), due to TP53 gene mutations and/or del(17p), is only one of several mechanisms underlying clinical aggressiveness. Indeed, mutations in the NOTCH1, SF3B1 and BIRC3 genes have been reported as recurrent in CLL and correlated to poor outcome which is in contrast to mutations in MYD88. An important caveat stemming from published studies is the relative small and hetereogeneous sample size thus making it difficult to draw conclusions regarding the actual incidence and prognostic relevance of these mutations in CLL. The European Research Initiative on CLL (ERIC) is pursuing several studies to shed light on these issues in large and well-annotated CLL series, comprising both GP CLL and CT CLL cases, and here we report the initial results of this project. To date, a total of 3185 patients have been included in the analysis; 596 (18.7%) are CT cases and 2589 (81.3%) GP cases. Mutational screening provided data on NOTCH1 (entire exon 34 or targeted analysis for del7544-45), TP53 (exons 4-9), SF3B1 (exons 14-16), BIRC3 (exons 6-9) and MYD88 (exon 5). For each gene, almost two-thirds of the cases were analyzed within a year of diagnosis. Overall, BIRC3 and MYD88 mutations were relatively rare [25/923 (2.7%) and 24/1085 (2.2%) respectively] , however: (i) BIRC3 mutations were significantly (p 〈 0.05) more frequent in cases with (a) unmutated IGHV genes (U-CLL), (b) del(11q) and (c) trisomy 12; (ii) all MYD88 mutations were found in cases with mutated IGHV genes. Regarding the other genes analyzed: (i) NOTCH1 mutations: 246/3038 (8%) cases, with a clear bias (p 〈 0.01) to CT cases; (ii) TP53 mutations: 217/2154 (10.1%) cases, with no significant differences between GP vs. CT cases, likely reflecting the policy of some institutions to routinely screen only U-CLL; (iii) SF3B1 mutations: 225/2028 (11%) cases (K700E: 39%), enriched among CT cases (p 〈 0.00001). Co-existing mutations were very infrequent: TP53+SF3B1: 28/1756, 1.6%; NOTCH1+TP53: 24/1978, 1.2%; NOTCH1+SF3B1: 15/1983, 0.7%. Overall, the prevalence of mutations differed significantly between institutions, probably due to differences in the composition of the respective cohorts and/or the detection method: (i) TP53: 4.5-39%; (ii) NOTCH1: 4-13.4%; SF3B1: 3.6-20.6%. Taking this into account, no clear geographical differences in the prevalence of different mutations were observed. For all three genes, mutations were significantly (p 〈 0.05) associated with Binet stages B/C, shorter lymphocyte doubling time and U-CLL. For each gene, mutant cases displayed significantly (p 〈 0.05) different profiles of genomic aberrations: (i) NOTCH1: high frequency of +12, low frequency of del(13q); (ii) TP53: high frequency of del(17p), low frequency of +12 and del(11q); (iii) SF3B1: high frequency of del(11q), low frequency of +12. The clinical impact of NOTCH1 and SF3B1 mutations as well as p53ab on time-to-first treatment (TTFT) was assessed in 647 treatment-naïve Binet A cases. In univariate analysis, mutations in NOTCH1 or SF3B1 and p53ab were significantly associated (p 〈 0.001) with shorter TTFT. In multivariate analysis (tested variables: IGHV mutational status, p53ab, +12, del(11q), NOTCH1 mutations, SF3B1 mutations), significant independent factors for shorter TTFT were SF3B1 mutations (p=0.01), p53ab (p 〈 0.0001), del(11q) (p=0.048) and U-CLL (p 〈 0.0001). In conclusion, despite some caveats (e.g. retrospective nature of the study, patient selection biases, and differences in laboratory methods), this study offers information on the prevalence and prognostic impact of recurrent gene mutations in CLL based on the largest series of patients examined thus far. This study also indicates that novel mutations are likely to be integrated into a prognostic biomarker index in CLL. Nevertheless, to achieve this goal, important pre-requisites must be met including the standardization/harmonization of laboratory methods and the prospective evaluation of these markers in clinical trials. Disclosures: Stamatopoulos: Roche: Research Funding.
    Type of Medium: Online Resource
    ISSN: 0006-4971 , 1528-0020
    RVK:
    RVK:
    Language: English
    Publisher: American Society of Hematology
    Publication Date: 2013
    detail.hit.zdb_id: 1468538-3
    detail.hit.zdb_id: 80069-7
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