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  • 1
    Online Resource
    Online Resource
    American Society for Microbiology ; 1985
    In:  Applied and Environmental Microbiology Vol. 49, No. 5 ( 1985-05), p. 1113-1118
    In: Applied and Environmental Microbiology, American Society for Microbiology, Vol. 49, No. 5 ( 1985-05), p. 1113-1118
    Abstract: Nutritional and physical factors affecting the decomposition of [ 14 C]lignocellulose prepared from Douglas fir ( Pseudotsuga menziesii ) were examined by incubating the labeled substrate with homogenized surface wood scrapings obtained from a Douglas fir log in a Pacific Northwest stream. Incubations were conducted in distilled water, in stream water collected from four different sources, or in a defined mineral salts solution with or without supplemental N (KNO 3 ). Decomposition rates of [ 14 C]lignocellulose, as measured by 14 CO 2 evolution, were greater in each of the four filter-sterilized sources of stream water than in distilled water alone. Decomposition experiments conducted in stream water media with the addition of defined mineral salts demonstrated that [ 14 C]cellulose decomposition was stimulated 50% by the addition of either KNO 3 or KH 2 PO 4 /K 2 HPO 4 and further enhanced (167%) by a combination of both. In contrast, [ 14 C]lignin decomposition was stimulated (65%) only by the addition of both N and P. Decomposition of [ 14 C]lignocellulose was greatest when supplemental KNO 3 was supplied in concentrations of at least 10.0 mg of N liter −1 but not increased further by higher concentrations. The decomposition of [ 14 C]lignocellulose increased as the incubation temperature was raised and NO 3 −1 -N supplementation further increased these rates between three-and sevenfold over the range of temperatures examined (5 to 22°C). Accumulation of NH 4 + (2 to 4 mg of N liter −1 ) was always observed in culture filtrates of incubations which had been supplemented with KNO 3 , the quantity being independent of NO 3 − concentrations ≥ 10 mg of N liter −1 . The role of supplemental NO 3 − in the decomposition of [ 14 C]lignocellulose is discussed in relation to wood decomposition and the low concentrations of N found in stream ecosystems of the Pacific Northwest.
    Type of Medium: Online Resource
    ISSN: 0099-2240 , 1098-5336
    RVK:
    Language: English
    Publisher: American Society for Microbiology
    Publication Date: 1985
    detail.hit.zdb_id: 223011-2
    detail.hit.zdb_id: 1478346-0
    SSG: 12
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  • 2
    Online Resource
    Online Resource
    American Society for Microbiology ; 1985
    In:  Applied and Environmental Microbiology Vol. 49, No. 5 ( 1985-05), p. 1119-1123
    In: Applied and Environmental Microbiology, American Society for Microbiology, Vol. 49, No. 5 ( 1985-05), p. 1119-1123
    Abstract: Surface wood samples obtained from a Douglas fir log ( Pseudotsuga menziesii ) in a Pacific Northwest stream were incubated in vitro with [ 14 C]lignocellulose in a defined mineral salts medium supplemented with 10 mg of N liter −1 of 15 N-labeled NO 3 − (50 atom% 15 N). Evolution of 14 CO 2 , distribution and isotopic dilution of 15 N, filtrate N concentrations, and the rates of denitrification, N 2 fixation, and respiration were measured at 6, 12, and 18 days of incubation. The organic N content of the lignocellulose-wood sample mixture had increased from 132 μg of N to a maximum of 231 μg of N per treatment after 6 days of incubation. Rates of [ 14 C]lignocellulose decomposition were greatest during the first 6 days and then began to decline over the remaining 12 days. Total CO 2 evolution was also highest at day 6 and declined steadily over the remaining duration of the incubation. Filtrate NH 4 + -N increased from background levels to a final value of 57 μg of N per treatment. Filtrate NO 3 − N completely disappeared by day 6, and organic N showed a slight decline between days 12 and 18. The majority of the 15 N that could be recovered appeared in the particulate organic fraction by day 6 (41 μg of N), and the filtrate NH 4 + N fraction contained 11 μg of 15 N by day 18. The 15 N enrichment values of the filtrate NH 4 + and the inorganic N associated with the particulate fraction had increased to approximately 20 atom% 15 N by 18 days of incubation, whereas the particulate organic fraction reached its highest enrichment by day 6. Measurements of N 2 fixation and denitrification indicated an insignificant gain or loss of N from the experimental system by these processes. The data show that woody debris in stream ecosystems might function as a rapid and efficient sink for exogenous N, resulting in stimulation of wood decomposition and subsequent activation of other N cycling processes.
    Type of Medium: Online Resource
    ISSN: 0099-2240 , 1098-5336
    RVK:
    Language: English
    Publisher: American Society for Microbiology
    Publication Date: 1985
    detail.hit.zdb_id: 223011-2
    detail.hit.zdb_id: 1478346-0
    SSG: 12
    Location Call Number Limitation Availability
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  • 3
    In: Biochemical Journal, Portland Press Ltd., Vol. 353, No. 2 ( 2001-01-15), p. 395-401
    Abstract: Chemical modification experiments with tetranitromethane (TNM) have been used to investigate the role of tyrosine residues in the formation of the complex between PpL (the single Ig-binding domain of protein L, isolated from P. magnus strain 3316) and the kappa light chain (κ-chain). Reaction of PpL with TNM causes the modification of 1.9 equiv. of tyrosine (Tyr51 and Tyr53) and results in an approx. 140-fold decrease in affinity for human IgG. Similar experiments with mutated PpL proteins suggest that nitration predominantly inactivates the protein by modification of Tyr53. Reduction of the nitrotyrosine groups to aminotyrosine by incubation with sodium hydrosulphite does not restore high affinity for IgG. Modification of κ-chain by TNM resulted in the nitration of 3.1±0.09 tyrosine residues. When the PpLŐκ-chain complex was incubated with TNM, 4.1±0.04 tyrosine residues were nitrated, indicating that one tyrosine residue previously modified by the reagent was protected from TNM when the proteins are in complex with each other. The Kd for the equilibrium between PpL, human IgG and their complex has been shown by ELISA to be 112±20nM. A similar value (153±33nM) was obtained for the complex formed between IgG and the Tyr64 → Trp mutant (Y64W). However, the Kd values for the equilibria involving the PpL mutants Y53F and Y53F,Y64W were found to be 3.2±0.2 and 4.6±1µM respectively. These suggest that the phenol group of Tyr53 in PpL is important to the stability of the PpLŐκ-chain complex.
    Type of Medium: Online Resource
    ISSN: 0264-6021 , 1470-8728
    RVK:
    Language: English
    Publisher: Portland Press Ltd.
    Publication Date: 2001
    detail.hit.zdb_id: 1473095-9
    SSG: 12
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  • 4
    Online Resource
    Online Resource
    American Society for Microbiology ; 1983
    In:  Applied and Environmental Microbiology Vol. 46, No. 6 ( 1983-12), p. 1409-1416
    In: Applied and Environmental Microbiology, American Society for Microbiology, Vol. 46, No. 6 ( 1983-12), p. 1409-1416
    Abstract: The distribution and lignocellulolytic activity of the microbial community was determined on a large log of Douglas fir ( Pseudotsuga menziesii ) in a Pacific Northwest stream. Scanning electron microscopy, plate counts, and degradation of [ 14 C]lignocelluloses prepared from Douglas fir and incubated with samples of wood taken from the surface and within the log revealed that most of the microbial colonization and lignocellulose-degrading activity occurred on the surface. Labeled lignocellulose and surface wood samples were incubated in vitro with nutrient supplements to determine potential limiting factors of [ 14 C]lignocellulose degradation. Incubations carried out in a nitrogenless mineral salts and trace elements solution were no more favorable to degradation than those carried out in distilled water alone. Incubations supplemented with either (NH 4 ) 2 SO 4 or organic nitrogen sources showed large increases in the rates of mineralization over incubations with mineral salts and trace elements alone, with the greatest effect being observed from an addition of (NH 4 ) 2 SO 4 . Subsequent incubations with (NH 4 ) 2 SO 4 , KNO 3 , and NH 4 NO 3 revealed that KNO 3 was the most favorable for lignin degradation, whereas all three supplements were equally favorable for cellulose degradation. Supplementation with glucose repressed both lignin and cellulose mineralization. The results reported in this study indicate that nitrogen limitation of wood decomposition may exist in streams of the Pacific Northwest. The radiotracer technique was shown to be a sensitive and useful tool for assessing relative patterns of lignocellulose decay and microbial activity in wood, along with the importance of thoroughly characterizing the experimental system before its general acceptance.
    Type of Medium: Online Resource
    ISSN: 0099-2240 , 1098-5336
    RVK:
    Language: English
    Publisher: American Society for Microbiology
    Publication Date: 1983
    detail.hit.zdb_id: 223011-2
    detail.hit.zdb_id: 1478346-0
    SSG: 12
    Location Call Number Limitation Availability
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  • 5
    In: Biochemical Journal, Portland Press Ltd., Vol. 353, No. 2 ( 2001-1-15), p. 395-
    Type of Medium: Online Resource
    ISSN: 0264-6021
    RVK:
    Language: Unknown
    Publisher: Portland Press Ltd.
    Publication Date: 2001
    detail.hit.zdb_id: 1473095-9
    SSG: 12
    Location Call Number Limitation Availability
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  • 6
    In: Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology, Elsevier BV, Vol. 135, No. 1 ( 2003-5), p. 1-8
    Type of Medium: Online Resource
    ISSN: 1095-6433
    RVK:
    Language: English
    Publisher: Elsevier BV
    Publication Date: 2003
    detail.hit.zdb_id: 1481599-0
    SSG: 12
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