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  • 1
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    PANGAEA
    In:  Supplement to: Schouten, Stefan; Pitcher, Angela; Hopmans, Ellen C; Villanueva, Laura; van Bleijswijk, Judith; Sinninghe Damsté, Jaap S (2012): Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids in the Arabian Sea oxygen minimum zone: I. Selective preservation and degradation in the water column and consequences for the TEX86. Geochimica et Cosmochimica Acta, 98, 228-243, https://doi.org/10.1016/j.gca.2012.05.002
    Publication Date: 2023-05-12
    Description: Glycerol dibiphytanyl glycerol tetraether lipids (GDGTs) have proven to be important biomarker lipids for specific archaeal lineages and their distribution is used as a paleotemperature proxy. In this study, we analyzed GDGTs in suspended particles in the water column of the Arabian Sea at different positions above, in and below the oxygen minimum zone (OMZ). GDGTs, both as intact polar lipid (IPL) and as core lipids, were detected throughout the water column but were most abundant at the upper part of the OMZ. Core lipid GDGTs, derived from non-living organic matter, were always much more abundant than GDGTs released by acid hydrolysis of an IPL fraction (IPL-derived GDGTs). Comparisons with 16S rRNA gene abundance showed that likely only 1-14% of total archaeal cells present were caught on the 0.7 lm filter used for lipid analysis. Despite this undersampling, the depth profiles of crenarchaeol core lipid with a phosphohexose or dihexose head group match previously reported profiles of (expressed) genes specific for ammonia-oxidizing Thaumarchaeota, such as 16S rDNA and amoA. In contrast, the crenarchaeol with a hexose head group as well as core lipid and IPL-derived crenarchaeol matched the genetic depth profiles much less, suggesting a contribution of GDGTs from non-living matter. TEX86 values of both core lipid and IPL-derived GDGTs increased from surface waters to the core of the OMZ, below which they decreased again, and did not correlate with in situ water temperature. In contrast, TEX86 values of IPL-derived GDGTs correlated well the relative amount of glycosidic GDGTs and were consistently higher than that those of CL GDGTs. This suggests that selective preservation of glycosidic GDGTs may mask TEX86 values of in situ produced GDGTs in deep marine waters.
    Keywords: 64PE301; Acyclic glycerol dialkyl glycerol tetraether; Crenarchaeol; Crenarchaeol isomer; DEPTH, water; Dicyclic glycerol dialkyl glycerol tetraether; Glycerol dialkyl glycerol tetraether; Intact polar lipids; Monocyclic glycerol dialkyl glycerol tetraether; NIOZ_UU; NIOZ Royal Netherlands Institute for Sea Research, and Utrecht University; PASOM; PASOM_10_WS; Pelagia; Tetraether index of 86 carbon atoms; Thaumarchaeota 16S copy number; Tricyclic glycerol dialkyl glycerol tetraether; Water sample; WS
    Type: Dataset
    Format: text/tab-separated-values, 216 data points
    Location Call Number Limitation Availability
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  • 2
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    PANGAEA
    In:  Supplement to: Wijgerde, Tim; Silva, Catarina I F; Scherders, Vera; van Bleijswijk, Judith; Osinga, Ronald (2014): Coral calcification under daily oxygen saturation and pH dynamics reveals the important role of oxygen. Biology Open, 3(6), 489-493, https://doi.org/10.1242/bio.20147922
    Publication Date: 2024-03-15
    Description: Coral reefs are essential to many nations, and are currently in global decline. Although climate models predict decreases in seawater pH (0.3 units) and oxygen saturation (5 percentage points), these are exceeded by the current daily pH and oxygen fluctuations on many reefs (pH 7.8-8.7 and 27-241% O2 saturation). We investigated the effect of oxygen and pH fluctuations on coral calcification in the laboratory using the model species Acropora millepora. Light calcification rates were greatly enhanced (+178%) by increased seawater pH, but only at normoxia; hyperoxia completely negated this positive effect. Dark calcification rates were significantly inhibited (51-75%) at hypoxia, whereas pH had no effect. Our preliminary results suggest that within the current oxygen and pH range, oxygen has substantial control over coral growth, whereas the role of pH is limited. This has implications for reef formation in this era of rapid climate change, which is accompanied by a decrease in seawater oxygen saturation owing to higher water temperatures and coastal eutrophication.
    Keywords: Acropora millepora; Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard deviation; Calcification/Dissolution; Calcification rate of calcium carbonate; Calcite saturation state; Calcite saturation state, standard deviation; Calculated; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Irradiance; Laboratory experiment; OA-ICC; Ocean Acidification International Coordination Centre; Other; Oxygen; Oxygen, standard deviation; Oxygen saturation; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Potentiometric; Potentiometric titration; Salinity; Single species; South Pacific; Species; Temperature, water; Temperature, water, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 1312 data points
    Location Call Number Limitation Availability
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