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  • 1
    ISSN: 1574-6941
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Abstract Viruses are active members of the microbial community in natural waters but little is known about the factors that regulate their activity and production. In this study we have investigated the effects of increased availability of organic nutrients and inorganic phosphate on activity, elemental composition, community structure and virus production in a natural bacterial community. The fraction of active cells in the community as estimated from microautoradiography of cells assimilating 3H-labeled thymidine ranged from 0–22%, but changes in the elemental composition of the cells indicated that more than 90% of the cells were active. The increase in carbon and energy availability stimulated virus production more than bacterial biomass production, while the increase in phosphate availability stimulated biomass production rather than virus production. A decrease in morphological diversity of the bacterial community was paralleled by a reduction in the virus-to-bacteria ratio (VBR) but the relationship between bacterial diversity and viral activity is uncertain. Our general conclusion is that nutrient availability, in addition to the bacterial activity, also affects the viral activity, and that both of these may affect the structure and diversity of the bacterial community.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    [s.l.] : Nature Publishing Group
    Nature 340 (1989), S. 467-468 
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] The highest total counts of viruses and bacteria were found in samples from the eutrophic lake Plussee (Table 1). We found total counts of viruses of between 5 x IO6 and 15 x IO6 per ml in marine samples taken during the productive part of the year. Marine samples taken in winter, however, were ...
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Extremophiles 1 (1997), S. 143-149 
    ISSN: 1433-4909
    Keywords: Key words Virus-like particles ; Dead Sea ; Halophilic ; Archaea ; Hypersaline
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Electron-microscopic examination of water samples from the hypersaline Dead Sea showed the presence of high numbers of virus-like particles. Between 0.9 and 7.3 × 107 virus-like particles ml−1 were enumerated in October 1994 in the upper 20 m of the water column during the decline of a bloom of halophilic Archaea. Virus-like particles outnumbered bacteria by a factor of 0.9–9.5 (average 4.4). A variety of viral morphologies were detected, the most often encountered being spindle-shaped, followed by polyhedral and tailed phages. In addition, other types of particles were frequently found, such as unidentified algal scales, and virus-sized star-shaped particles. Water samples collected during 1995 contained low numbers of both bacteria and virus-like particles (1.9–2.6 × 106 and 0.8–4.6 × 107 ml−1 in April 1995), with viral numbers sharply declining afterwards (less than 104 ml−1 in November 1995–January 1996). It is suggested that viruses may play a major role in the decline of halophilic archaeal communities in the Dead Sea, an environment in which protozoa and other predators are absent.
    Type of Medium: Electronic Resource
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  • 4
    Publication Date: 2024-09-03
    Description: The international and interdisciplinary sea-ice drift expedition “The Multidisciplinary drifting Observatory for the Study of Arctic Climate” (MOSAiC) was conducted from October 2019 to September 2020. The aim of MOSAiC was to study the interconnected physical, chemical, and biological characteristics and processes from the atmosphere to the deep sea of the central Arctic system. The ecosystem team addressed current knowledge gaps and explored unknown biological properties over a complete seasonal cycle focusing on three major research areas: biodiversity, biogeochemical cycles, and linkages to the environment. In addition to the measurements of core properties along a complete seasonal cycle, dedicated projects covered specific processes and habitats, or organisms on higher taxonomic or temporal resolution in specific time windows. A wide range of sampling instruments and approaches, including sea-ice coring, lead sampling with pumps, rosette-based water sampling, plankton nets, remotely operated vehicles, and acoustic buoys, was applied to address the science objectives. Further, a broad range of process-related measurements to address, for example, productivity patterns, seasonal migrations, and diversity shifts, were made both in situ and onboard RV Polarstern. This article provides a detailed overview of the sampling approaches used to address the three main science objectives. It highlights the core sampling program and provides examples of habitat- or process-specific sampling. The initial results presented include high biological activities in wintertime and the discovery of biological hotspots in underexplored habitats. The unique interconnectivity of the coordinated sampling efforts also revealed insights into cross-disciplinary interactions like the impact of biota on Arctic cloud formation. This overview further presents both lessons learned from conducting such a demanding field campaign and an outlook on spin-off projects to be conducted over the next years.
    Type: Article , PeerReviewed
    Format: text
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  • 5
    Publication Date: 2024-07-19
    Description: The data-sets comes from three locations representative of three different marine ecosystems: Fjord (Chilean Patagonia), Ny-Ålesund (Arctic) and Mediterranean (Crete). It contains chemical and biological data collected in three mesocosm and four microcosm experiments conducted in the spring - summer period, in which the physico-chemical (pH, Carbon) and biological (grazing) conditions were altered to represent potential future climate change scenarios. The data-sets contains measurements in: carbonate chemistry, macro- and micro-nutrients concentrations, primary production, phytoplankton taxonomy, virus abundance, bacterial production, bacterial abundance, Zoo- and microzoo-plankton abundance, grazing rates for different taxonomic groups.
    Keywords: Arctic; Climate change; climatic; fjords; Marine ecosystems; Mediterranean; Microbial Food Web; multi-stressors; non-climatic; OCEAN-CERTAIN; Ocean Food-web Patrol – Climate Effects: Reducing Targeted Uncertainties with an Interactive Network
    Type: dataset publication series
    Format: application/zip, 7 datasets
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  • 6
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    PANGAEA
    In:  Supplement to: Bratbak, Gunnar; Jacquet, Stéphan; Larsen, Aud; Pettersson, Lasse H; Sazhin, Andrey F; Thyrhaug, Runar (2011): The plankton community in Norwegian coastal waters-abundance, composition, spatial distribution and diel variation. Continental Shelf Research, 31(14), 1500-1514, https://doi.org/10.1016/j.csr.2011.06.014
    Publication Date: 2024-07-19
    Description: The purpose of the present study was to explore the composition and variation of the pico-, nano- and micro-plankton communities in Norwegian coastal waters and Skagerrak, and the co-occurrence of bacteria and viruses. Samples were collected along three cruise transects from Jaeren, Lista and Oksoy on the south coast of Norway and into the North Sea and Skagerrak. We also followed a drifting buoy for 55 h in Skagerrak in order to observe diel variations. Satellite ocean color images (SeaWiFS) of the chlorophyll a (chl a) distribution compared favorably to in situ measurements in open waters, while closer to the shore remote sensing chl a data was overestimated compared to the in situ data. Using light microscopy, we identified 49 micro- and 15 nanoplankton sized phototrophic forms as well as 40 micro- and 12 nanoplankton sized heterotrophic forms. The only picoeukaryote (0.2-2.0 µm) we identified was Resultor micron (Pedinophyceae). Along the transects a significant variation in the distribution and abundance of different plankton forms were observed, with Synechococcus spp and autotrophic picoeukaryotes as the most notable examples. There was no correlation between viruses and chl a, but between viruses and bacteria, and between viruses and some of the phytoplankton groups, especially the picoeukaryotes. Moreover, there was a negative correlation between nutrients and small viruses (Low Fluorescent Viruses) but a positive correlation between nutrients and large viruses (High Fluorescent Viruses). The abundance of autotrophic picoplankton, bacteria and viruses showed a diel variation in surface waters with higher values around noon and late at night and lower values in the evening. Synechococcus spp were found at 20 m depth 25-45 nautical miles from shore apparently forming a bloom that stretched out for more than 100 nautical miles from Skagerrak and up the south west coast of Norway. The different methods used for assessing abundance, distribution and diversity of microorganisms yielded complementary information about the plankton community. Flow cytometry enabled us to map the distribution of the smaller phytoplankton forms, bacteria and viruses in more detail than has been possible before but detection and quantification of specific forms (genus or species) still requires taxonomic skills, molecular analysis or both.
    Keywords: International Polar Year (2007-2008); IPY; North Sea; Norway_coast; Water sample; WS
    Type: dataset publication series
    Format: application/zip, 2 datasets
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  • 7
    Publication Date: 2024-07-22
    Keywords: 19-Hexanoyloxyfucoxanthin; Abundance; Abundance per volume; Alloxanthin; Ammonium; Arctic; Arctic: Ny-Alesund - (west coast of Spitsbergen); Bacterial production; beta-Carotene; Carbon, organic, dissolved; Carbon, organic, particulate; Carbon, organic, total; Chlorophyll a; Chlorophyll b; Chlorophyll c2; Chlorophyll c3; Chlorophyllide a; Climate change; climatic; Copepoda, biomass as carbon; DATE/TIME; Day of experiment; Diadinoxanthin; Diatoxanthin; fjords; Fucoxanthin; Gross primary production of oxygen; Iron; Iron, dissolved; Iron, particulate; Lutein; Marine ecosystems; Mediterranean; MESO; Mesocosm experiment; Microbial Food Web; Monovinyl chlorophyll a; multi-stressors; Net community production of oxygen; Nitrate; Nitrogen, organic, particulate; Nitrogen, total; Nitrogen/Carbon ratio; non-climatic; Number; OC_Arctic_Mesocosm; OCEAN-CERTAIN; Ocean Food-web Patrol – Climate Effects: Reducing Targeted Uncertainties with an Interactive Network; Peridinin; pH; Pheophorbide b; Pheophytin a; Phosphate; Phosphorus, particulate; Primary production of carbon; Ratio; Respiration rate, oxygen; Silicate; Time in hours; Treatment; Violaxanthin; Viral abundance; Zeaxanthin
    Type: dataset
    Format: text/tab-separated-values, 5638 data points
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  • 8
    Publication Date: 2024-07-22
    Keywords: 19-Hexanoyloxyfucoxanthin; Abundance; Abundance per volume; Alloxanthin; Ammonium; Arctic; Arctic: Ny-Alesund - (west coast of Spitsbergen); Bacterial production; beta-Carotene; Biomass as carbon per volume; Carbon, organic, dissolved; Chlorophyll a; Chlorophyll b; Chlorophyll c2; Chlorophyll c3; Chlorophyllide a; Climate change; climatic; DATE/TIME; Day of experiment; Diadinoxanthin; Diatoxanthin; fjords; Fucoxanthin; Gross community production of oxygen; Hydrogen peroxide, water; Iron; Lutein; Marine ecosystems; Mediterranean; MESO; Mesocosm experiment; Microbial Food Web; Monovinyl chlorophyll a; multi-stressors; Net community production of oxygen; Nitrate; non-climatic; Number; OC_Arctic_Mesocosm; OCEAN-CERTAIN; Ocean Food-web Patrol – Climate Effects: Reducing Targeted Uncertainties with an Interactive Network; Peridinin; pH; Pheophorbide a; Pheophytin a; Phosphate; Primary production of carbon; Respiration rate, oxygen; Silicate; Time in hours; Treatment; Violaxanthin; Zeaxanthin; Zooplankton
    Type: dataset
    Format: text/tab-separated-values, 6036 data points
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  • 9
    Publication Date: 2024-07-22
    Keywords: Abundance; Additives; Ammonium; Bacteria; Bacteria, heterotrophic; Bacteria, production as carbon; Carbon, organic, dissolved; Carbon, organic, particulate; Carbon, organic, total; Chlorophyll a, fractionated; Chlorophyll a, total; Ciliates; Copepoda, adult; DATE/TIME; MESO; Mesocosm experiment; Mesocosm label; Nanoflagellates, heterotrophic; Ny_Ålesund_Mesocosm_2015; Ny-Ålesund, Spitsbergen; Phosphorus, reactive soluble; Silicate; Time, incubation
    Type: dataset
    Format: text/tab-separated-values, 2048 data points
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  • 10
    Publication Date: 2024-07-19
    Keywords: Abundance; Biomass as carbon; Biomass as carbon, standard deviation; Depth, bottom/max; Depth, top/min; DEPTH, water; North Sea; Norway_coast; Occurrence; Size; Standard deviation; Taxon/taxa; Water sample; WS
    Type: dataset
    Format: text/tab-separated-values, 1176 data points
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