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  • 1
    Electronic Resource
    Electronic Resource
    [s.l.] : Nature Publishing Group
    Nature genetics 31 (2002), S. 205-209 
    ISSN: 1546-1718
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] The classical (two-round) hypothesis of vertebrate genome duplication proposes two successive whole-genome duplication(s) (polyploidizations) predating the origin of fishes, a view now being seriously challenged. As the debate largely concerns the relative merits of the 'big-bang mode' theory ...
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Journal of molecular evolution 51 (2000), S. 88-96 
    ISSN: 1432-1432
    Keywords: Key words: Gene (genome) duplication — Vertebrate evolution — Gene family — Duplication time dating
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract. In this paper we have analyzed 49 vertebrate gene families that were generated in the early stage of vertebrates and/or shortly before the origin of vertebrates, each of which consists of three or four member genes. We have dated the first (T1) and second (T2) gene duplications of 26 gene families with 3 member genes. The means of T1 (594 mya) and T2 (488 mya) are largely consistent to a well-cited version of two-round (2R) genome duplication theory. Moreover, in most cases, the time interval between two successive gene duplications is large enough that the fate of duplicate genes generated by the first gene duplication was likely to be determined before the second one took place. However, the phylogenetic pattern of 23 gene families with 4 members is complicated; only 5 of them are predicted by 2R model, but 11 families require an additional gene (or genome) duplication. For the rest (7 families), at least one gene duplication event had occurred before the divergence between vertebrate and Drosophila, indicating a possible misleading of the 4:1 rule (member gene ratio between vertebrates and invertebrates). Our results show that Ohno's 2R conjecture is valid as a working hypothesis for providing a most parsimonious explanation. Although for some gene families, additional gene duplication is needed, the credibility of the third genome duplication (3R) remains to be investigated.
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  • 3
    Publication Date: 2013-05-05
    Description: Background: The prognostic value of gender and age in the survival of nasopharyngeal carcinoma (NPC) patients treated with intensity-modulated radiotherapy (IMRT) is unclear. Several studies have suggested a female advantage in the prognosis of solid tumors. We investigated the relationship between gender differences and disease outcome in NPC patients treated with IMRT in South China. Methods: A total of 299 patients with non-disseminated NPC were analyzed retrospectively. IMRT was delivered with a simultaneous modulated, accelerated radiotherapy boost technique at prescribed doses of 70 Gy/30 fractions/6 weeks to the primary tumor (GTVp) and positive neck nodes (GTVn), 60Gy (2.0 Gy/day) to the clinical target volume (CTV) and upper neck region and 54 Gy (1.8 Gy/day) to the clinically negative low neck. A median boost dose of 9.2 Gy (4--20 Gy) was administered to patients with persistent disease at the primary site. Results: With a median follow-up of 52 months, the male patients had a significantly unfavorable 5-year OS (70.7% compared to 94.1%, P 〈 0.001), DPFS (71.5% compared to 87.3%, P = 0.029) and DMFS (77.2% compared to 89.7%, P = 0.036) than the female patients. In patients younger than 45, the male patients had a poorer 5-year OS (66.8% compared to 91.2%, P = 0.008), DPFS (59.9% compared to 91.2%, P = 0.005) and DMFS (66.4% compared to 94.0%, P = 0.004) than the female patients. For patients older than 45, only the 5-year OS (72.2% compared to 96.0%, P = 0.001) was significantly different. Conclusions: Gender and age are strong independent prognostic factors for NPC in this study. We are the first to report that younger male patients were more likely to have distant metastases and exhibited inferior overall survival and disease progression-free survival rates compared to other patients.
    Electronic ISSN: 1471-2407
    Topics: Medicine
    Published by BioMed Central
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  • 4
    Publication Date: 2015-03-24
    Description: The superconducting state is formed by the condensation of a large number of Cooper pairs. The normal state electronic properties can give significant influence on the superconducting state. For usual type-II superconductors, the vortices are cylinder like with a round cross-section. For many two dimensional superconductors, such as Cuprates, albeit the in-plane anisotropy, the vortices generally have a round shape. In this paper we report results based on the scanning tunnelling microscopy/spectroscopy measurements on a newly discovered superconductor Ta4Pd3Te16. The chain-like conducting channels of PdTe2 in Ta4Pd3Te16 make a significant anisotropy of the in-plane Fermi velocity. We suggest at least one anisotropic superconducting gap with gap minima or possible node exists in this multiband system. In addition, elongated vortices are observed with an anisotropy of ξ||b/ξ&bottom⊥b ≈ 2.5. Clear Caroli-de Gennes-Matricon states are also observed within the vortex cores. Our results will initiate the study on the elongated vortices and superconducting mechanism in the new superconductor Ta4Pd3Te16. Scientific Reports 5 doi: 10.1038/srep09408
    Electronic ISSN: 2045-2322
    Topics: Natural Sciences in General
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  • 5
    Publication Date: 2015-06-18
    Description: Article DNA-coated colloids have failed to achieve their promise of programmable self-assembly because they stick to each other like Velcro. Here Wang et al. overcome this problem by making clickable smooth colloids that are coated with short single-stranded DNA at high density. Nature Communications doi: 10.1038/ncomms8253 Authors: Yu Wang, Yufeng Wang, Xiaolong Zheng, Étienne Ducrot, Jeremy S. Yodh, Marcus Weck, David J. Pine
    Electronic ISSN: 2041-1723
    Topics: Biology , Chemistry and Pharmacology , Natural Sciences in General , Physics
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  • 6
    Publication Date: 2016-02-04
    Description: Prognostic and diagnostic potential of miR-146a in oesophageal squamous cell carcinoma British Journal of Cancer 114, 290 (02 February 2016). doi:10.1038/bjc.2015.463 Authors: Cong Wang, Shanghui Guan, Fang Liu, Xuan Chen, Lihui Han, Ding Wang, Effat Un Nesa, Xintong Wang, Cihang Bao, Nana Wang & Yufeng Cheng
    Keywords: ESCCmiR-146aprognosisdiagnosistissueserumFFPE
    Print ISSN: 0007-0920
    Electronic ISSN: 1532-1827
    Topics: Medicine
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  • 7
    Publication Date: 2016-04-28
    Description: Energy & Fuels DOI: 10.1021/acs.energyfuels.6b00119
    Print ISSN: 0887-0624
    Electronic ISSN: 1520-5029
    Topics: Chemistry and Pharmacology , Energy, Environment Protection, Nuclear Power Engineering , Process Engineering, Biotechnology, Nutrition Technology
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  • 8
    Publication Date: 2016-05-19
    Description: Energy & Fuels DOI: 10.1021/acs.energyfuels.6b00457
    Print ISSN: 0887-0624
    Electronic ISSN: 1520-5029
    Topics: Chemistry and Pharmacology , Energy, Environment Protection, Nuclear Power Engineering , Process Engineering, Biotechnology, Nutrition Technology
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  • 9
    Publication Date: 2013-05-01
    Description: Background: Porcine reproductive and respiratory syndrome virus (PRRSV) is largely responsible for heavy economic losses in the swine industry worldwide because of its high mutation rate and subsequent emergence of virulent strains. However, the immunological and pathological responses of pigs to PRRSV strains with different virulence have not been completely elucidated. Methods: Twenty-four piglets were divided into 4 groups (n = 6 each) and inoculated with highly pathogenic PRRSV isolate BB0907 (HP), low pathogenic PRRSV NT0801 (LP), LP derivative strain NT0801-F70 (LP-der), and DMEM medium (control), respectively. The changes in TLR2, 3, 7, and 8 gene expression and TNF-alpha, IL-1beta, IL-6, IFN-gamma, and IL-10 secretion were evaluated using real-time PCR and ELISA at 6, 9, and 15 days post inoculation (d.p.i.). The cytokine levels were evaluated in the supernatants of porcine alveolar macrophages (PAMs) and peripheral blood mononuclear cells (PBMCs) following stimulation with LTA, poly(I:C), CL097, and PRRSV individually. Results: HP caused more severe clinical signs and pathological lesions in swine than LP and LP-der had almost no virulence compared with LP. The serum levels of IL-1beta, IL-6, TNF-alpha, and IFN-gamma were increased in HP-infected piglets, which were greater than in those infected with LP or LP-der. The mRNA levels of TLR3, 7, and 8 were significantly up-regulated in PAMs in HP-infected pigs compared to those in groups LP and LP-der. Furthermore, TNF-alpha and IL-1beta secretion in PAMs from group LP was statistically greater than those from the control group after stimulation with either poly(I:C) or CL097. Meanwhile, TNF-alpha, IL-1beta, and IL-6 levels in CL097-stimulated PBMCs from HP-infected pigs were markedly higher than those from the LP- and LP-der-infected groups. Conclusions: We found that HP was a stronger inducer of TLR 3, 7, and 8 expression and IL-1beta, IL-6, TNF-alpha, and IFN-gamma production compared to LP and LP-der. HP enhanced production of TNF-alpha, IL-1beta, and IL-6 in PBMCs following CL097-stimulation more than LP and LP-der, whereas LP enhanced the secretion of TNF-alpha and IL-1beta in poly(I:C)- and CL097-stimulated PAMs. Our data regarding cellular reactivity to different isolates should be useful in the development of more efficacious vaccines.
    Electronic ISSN: 1743-422X
    Topics: Medicine
    Published by BioMed Central
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  • 10
    Publication Date: 2018-02-22
    Description: Author(s): Hongbo Xie, Hucheng Pan, Yuping Ren, Liqing Wang, Yufeng He, Xixi Qi, and Gaowu Qin All of the A B 2 Laves phases discovered so far satisfy the general crystalline structure characteristic of translational symmetry; however, we report here a new structured Laves phase directly precipitated in an aged Mg-In-Ca alloy by using aberration-corrected scanning transmission electron microsco... [Phys. Rev. Lett. 120, 085701] Published Wed Feb 21, 2018
    Keywords: Condensed Matter: Structure, etc.
    Print ISSN: 0031-9007
    Electronic ISSN: 1079-7114
    Topics: Physics
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