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  • 1
    Online Resource
    Online Resource
    Cham :Springer International Publishing AG,
    Keywords: Marine Sciences. ; Electronic books.
    Type of Medium: Online Resource
    Pages: 1 online resource (304 pages)
    Edition: 1st ed.
    ISBN: 9783319302591
    DDC: 579.176
    Language: English
    Note: Intro -- Preface: Building on a History of Dual Careers in the Sciences -- Contents -- Contributors -- Part I: Unraveling Microbial Diversity and Their Processes -- Phagotrophic Protists: Central Roles in Microbial Food Webs -- Overview -- Protists as Elemental Recyclers -- Protists as Consumers of Bacteria -- Protists as Consumers of Phytoplankton -- Protists in High Latitude Food Webs -- Looking to the Future -- Evelyn B. Sherr and Barry F. Sherr -- References -- Drivers That Structure Biodiversity in the Plankton -- Plankton Biodiversity -- Alternate Hypotheses That Explain the Paradox of the Plankton -- An Organismal Perspective on the Paradox of the Plankton: A Biodiversity Explosion from Within? -- Linking Individual Level Behaviors with Plankton Ecology -- Pervasive Intra-specific Variability in the Genetic Diversity, Physiological Capacity, and Behavioral Repertoire of Plankton -- Evolution: Generating and Structuring Diversity over the Long Term -- Opportunities for Progress -- Intra-specific Variability and Its Ramifications for Plankton Ecology Need to Be Quantified -- Plankton Ecology, Now and in the Future -- Tatiana A. Rynearson and Susanne Menden-Deuer -- References -- The Elongated, the Squat and the Spherical: Selective Pressures for Phytoplankton Shape -- Introduction -- Effects of Shape on Diffusion -- Other Selective Pressures -- Lee Karp-Boss and Emmanuel Boss -- References -- Crossing the Freshwater/Saline Barrier: A Phylogenetic Analysis of Bacteria Inhabiting Both Freshwater and Marine Ecosystems -- Introduction -- Recent Data on Shared Taxa -- Synthesis of Published Sequence Data -- Future Perspectives -- Mina Bižić-Ionescu and Danny Ionescu -- References -- Approaches and Challenges for Linking Marine Biogeochemical Models with the "Omics" Revolution -- Introduction -- Bridging the Cultural and Structural Divide. , Omics Measurements for the Modeler -- Biogeochemical Models for Microbial Ecologists -- The Structural Divide -- Relating Existing Omics to Current Biogeochemical Models -- Taxonomy and Diversity -- Targeting Genes and/or Pathways -- Near-Term Innovation -- Conclusions -- Victoria J. Coles and Raleigh R. Hood -- References -- Part II: Viewing Growth and Trophodynamics Through a Stoichiometric Lens -- Out of Africa and into Stoichiometry -- Susan S. Kilham and Peter Kilham -- References -- Exploring the Implications of the Stoichiometric Modulation of Planktonic Predation -- Introduction -- Characterising the Predator-Prey Stoichiometric Link -- Elemental Stoichiometry and Commercial Microalgal Production -- Effects of Temperature, Ocean Acidification and Nutrient Excess -- Avoiding Predation -- Stoichiometry and Mixotrophy -- Conclusions -- Aditee Mitra and Kevin J. Flynn -- References -- Part III: Understanding the Mysteries of Light and Nitrogen -- On Saturating Response Curves from the Dual Perspectives of Photosynthesis and Nitrogen Metabolism -- Introduction -- Static vs. Dynamic Behavior -- Gradient Signals and Dynamics of Response Curves -- Overall Perspective on Dynamic Kinetics -- Todd M. Kana and Patricia M. Glibert -- References -- Nitrate Reductase: A Nexus of Disciplines, Organisms, and Metabolism -- Introduction -- Why Nitrate Reductase? -- Understanding That Has Emerged from Recent NR Measurements -- Recent Advances and Emerging Challenges -- Conclusion -- Erica B. Young and John A. Berges -- References -- The Ammonium Paradox of an Urban High-­Nutrient Low-Growth Estuary -- High-Nutrient Low-Growth Estuaries and Oligotrophication -- Observation of an Ammonium Paradox -- Ammonium: The Gatekeeper Controlling Access to Nitrate -- Frances Wilkerson and Richard Dugdale -- References. , Why Is Planktonic Nitrogen Fixation So Rare in Coastal Marine Ecosystems? Insights from a Cross-Systems Approach -- Roxanne Marino and Robert W. Howarth -- References -- Where Light and Nutrients Collide: The Global Distribution and Activity of Subsurface Chlorophyll Maximum Layers -- At the Confluence of Light and Nutrients -- Distribution of Marine SCMLs -- Phytoplankton Production in SCMLs -- Subsurface Chlorophyll Maximum Layers in Lakes -- Greg M. Silsbe and Sairah Y. Malkin -- References -- Part IV: Looking in the Rear View Mirror: The Long View on Changing Ecosystems -- An Ecosystem in Transition: The Emergence of Mixotrophy in the Arabian Sea -- Introduction -- Materials and Methods -- Arabian Sea Cruises and Sample Collection -- Phytoplankton Cell Counts -- Photosynthetic Rate Measurements -- Autotrophy Versus Heterotrophy in Noctiluca -- Salp Grazing Experiments -- Lipid Accumulation in Noctiluca -- Statistical Analysis -- Results and Discussion -- Emergence of Noctiluca and Shift in Phytoplankton Biodiversity in the Arabian Sea -- Environmental Factors Associated with Outbreaks of Noctiluca Blooms -- Noctiluca and Mixotrophy -- Socioeconomic and Global Significance of Noctiluca Blooms -- Joaquim I. Goes and Helga do R. Gomes -- References -- The Saint Lawrence Island Polynya: A 25-Year Evaluation of an Analogue for Climate Change in Polar Regions -- Introduction -- Synthesis Results and Discussion -- Overview for Synthesis -- Summer Sampling in SLIP (July-September 1990-2015) -- Spring (April-June 1999-2007) -- Winter (March 2008-2010) -- The Northern Bering Sea: Interannual Variability and Change -- Time Series Stations Within the "Western" Cluster Group Under Anadyr Water -- Benthivores -- Overall Summary -- Jacqueline M. Grebmeier and Lee W. Cooper -- References. , Ecological Processes and Nutrient Transfers from Land to Sea: A 25-Year Perspective on Research and Management of the Seine River System -- Introduction -- 1850-1990: Organic Pollution and Oxygen -- 1990-2000: Eutrophication and Algal Blooms -- 2000-2015: Agricultural Pollution and Nitrate Contamination -- Conclusion: From Microbial Ecology to Territorial Biogeochemistry -- Josette Garnier and Gilles Billen -- References -- A Historical Perspective on Eutrophication in the Pensacola Bay Estuary, FL, USA -- Introduction -- Pensacola Bay Physical Setting -- Human Colonization of Pensacola Bay -- River and Estuarine Water Quality -- Controls on Primary Production, Organic Matter, and Nutrient Cycling -- Summary -- Jane M. Caffrey and Michael C. Murrell -- References -- Unpublished Reports -- Websites -- Meeting in the Middle: On the Interactions Between Microalgae and Their Predators or Zooplankton and Their Food -- Introduction -- Materials and Methods -- Results -- Discussion -- Karen H. Wiltshire and Maarten Boersma -- References -- Lake Transparency: A Window into Decadal Variations in Dissolved Organic Carbon Concentrations in Lakes of Acadia National Park, Maine -- Introduction -- Methods -- Model Description and Development -- Results -- Discussion -- Collin Roesler and Charles Culbertson -- References -- Part V: Focusing on Unique Systems, Processes and Dynamics -- Phytoplankton Biodiversity in the Oligotrophic Northwestern Sargasso Sea -- Introduction -- Materials and Methods -- Results -- Discussion -- James L. Pinckney and Tammi L. Richardson -- References -- Biological Oceanography of the Gulf of Carpentaria, Australia: A Review -- Introduction -- Study Area -- Currents and Hydrography -- Phytoplankton and the Role of Nutrients -- Zooplankton -- Penaeid Prawn Larval Ecology -- Larval Dispersal Mechanisms -- Summary Points. , Peter C. Rothlisberg and Michele A. Burford -- References -- Discerning the Causes of Toxic Cyanobacteria (Lyngbya majuscula) Blooms in Moreton Bay, Australia -- Introduction -- Nutrient Interactions -- Light Interactions -- Conceptual Model -- Broader Significance -- Judith M. O'Neil and William C. Dennison -- References -- Copepod, Ctenophore, and Schyphomedusae Control in Structuring the Chesapeake Bay Summer Mesohaline Planktonic Food Web -- Introduction -- Methods -- Results and Discussion -- General Patterns in the Summer Mesohaline Chesapeake Bay -- Top-Down Controls and Thresholds -- Bottom Up Controls in Summer Mesohaline Stations -- Implications -- Kevin G. Sellner and Stella G. Sellner -- References -- Microbiogeochemical Ecophysiology of Freshwater Hydrothermal Vents in Mary Bay Canyon, Yellowstone Lake, Yellowstone National Park WY -- Introduction -- Methods -- Big Picture Outcomes -- Closing Remarks -- Carmen Aguilar and Russell Cuhel -- References -- Index.
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  • 2
    Publication Date: 2022-05-25
    Description: Author Posting. © The Authors, 2005. This is the author's version of the work. It is posted here by permission of Ecological Society of America for personal use, not for redistribution. The definitive version was published in Ecological Applications 16 (2006): 2091–2122, doi:10.1890/1051-0761(2006)016[2091:MFMDDA]2.0.CO;2.
    Description: Denitrification, the reduction of the nitrogen (N) oxides, nitrate (NO3-) and nitrite (NO2-), to the gases nitric oxide (NO), nitrous oxide (N2O) and dinitrogen (N2), is important to primary production, water quality and the chemistry and physics of the atmosphere at ecosystem, landscape, regional and global scales. Unfortunately, this process is very difficult to measure, and existing methods are problematic for different reasons in different places at different times. In this paper, we review the major approaches that have been taken to measure denitrification in terrestrial and aquatic environments and discuss the strengths, weaknesses and future prospects for the different methods. Methodological approaches covered include; 1) acetylene-based methods, 2) 15N tracers, 3) direct N2 quantification, 4) N2/Ar ratio quantification, 5) mass balance approaches, 6) stoichiometric approaches, 7) methods based on stable isotopes, 8) in situ gradients with atmospheric environmental tracers and 9) molecular approaches. Our review makes it clear that the prospects for improved quantification of denitrification vary greatly in different environments and at different scales. While current methodology allows for the production of accurate estimates of denitrification at scales relevant to water and air quality and ecosystem fertility questions in some systems (e.g., aquatic sediments, well defined aquifers), methodology for other systems, especially upland terrestrial areas, still needs development. Comparison of mass balance and stoichiometric approaches that constrain estimates of denitrification at large scales with point measurements (made using multiple methods), in multiple systems, is likely to propel more improvement in denitrification methods over the next few years.
    Keywords: Denitrification ; Greenhouse effect ; Nitrate ; Nitric oxide nitrogen ; Nitrous oxide ; Stable isotopes ; Water quality
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
    Format: 822728 bytes
    Format: application/pdf
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