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  • California; CSIA; ecology; estuaries; Food web; San Francisco Bay; trophic discrimination factor; trophic level; trophic position  (1)
  • Diet  (1)
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  • 1
    Publication Date: 2023-01-30
    Description: Aquatic and terrestrial plant materials were collected from the Sacramento-San Joaquin Delta region. Carbon and nitrogen isotope values of individual amino acids and bulk materials were measured. Fifty-six specimens were collected from three locations within the Delta, two flooded islands, Mildred and Liberty Islands, as well as an adjacent terrestrial riparian habitat (Big Break Regional Shoreline). Specimens included terrestrial trees, shrubs, forbs, and grasses as well as floating, submerged, and emergent aquatic plants. Bulk leaf tissues were processed and the carbon and nitrogen isotope values of bulk tissues were measured following Tipple and Ehleringer, 2018 (Oecologia, 187, 1053-1075). Amino acids were hydrolyzed, derivatized, and isolated following Vokhshoori et al., 2013 (Marine Ecology Progress Series, 504, 59-72). Carbon and nitrogen isotope values of individual amino acids were measured following Vokhshoori et al., 2013 and Vokhshoori and McCarthy, 2013 (PLoS ONE, 9, 6, e98087), respectively. The purpose of this research was to create a novel molecular isotope toolset to increase the understanding of biogeochemistry and food web structure of the Sacramento-San Joaquin Delta's tidal wetlands and estuarine marshes.
    Keywords: California; CSIA; ecology; estuaries; Food web; San Francisco Bay; trophic discrimination factor; trophic level; trophic position
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ecology and Evolution 5 (2015): 1278–1290, doi:10.1002/ece3.1437.
    Description: Compound-specific stable isotope analysis (CSIA) of amino acids (AA) has rapidly become a powerful tool in studies of food web architecture, resource use, and biogeochemical cycling. However, applications to avian ecology have been limited because no controlled studies have examined the patterns in AA isotope fractionation in birds. We conducted a controlled CSIA feeding experiment on an avian species, the gentoo penguin (Pygoscelis papua), to examine patterns in individual AA carbon and nitrogen stable isotope fractionation between diet (D) and consumer (C) (Δ13CC-D and Δ15NC-D, respectively). We found that essential AA δ13C values and source AA δ15N values in feathers showed minimal trophic fractionation between diet and consumer, providing independent but complimentary archival proxies for primary producers and nitrogen sources respectively, at the base of food webs supporting penguins. Variations in nonessential AA Δ13CC-D values reflected differences in macromolecule sources used for biosynthesis (e.g., protein vs. lipids) and provided a metric to assess resource utilization. The avian-specific nitrogen trophic discrimination factor (TDFGlu-Phe = 3.5 ± 0.4‰) that we calculated from the difference in trophic fractionation (Δ15NC-D) of glutamic acid and phenylalanine was significantly lower than the conventional literature value of 7.6‰. Trophic positions of five species of wild penguins calculated using a multi-TDFGlu-Phe equation with the avian-specific TDFGlu-Phe value from our experiment provided estimates that were more ecologically realistic than estimates using a single TDFGlu-Phe of 7.6‰ from the previous literature. Our results provide a quantitative, mechanistic framework for the use of CSIA in nonlethal, archival feathers to study the movement and foraging ecology of avian consumers.
    Description: This research was funded by National Science Foundation Office of Polar Programs [grants ANT-0125098, ANT-0739575] and the 2013 Antarctic Science Bursaries.
    Keywords: Amino acid ; Avian ; Compound-specific stable isotope analysis ; Diet ; Fractionation ; Penguin ; Trophic position
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
    Format: application/msword
    Location Call Number Limitation Availability
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