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  • CDRILL; Core drilling; Eastern Mediterranean Sea; HERMIONE; Hotspot Ecosystem Research and Mans Impact On European Seas; Kazan-MV  (1)
  • Ciliate  (1)
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  • 1
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    PANGAEA
    In:  Supplement to: Pachiadaki, Maria G; Lykousis, Vasilios; Stefanou, Euripides G; Kormas, Konstantinos A (2010): Prokaryotic community structure and diversity in the sediments of an active submarine mud volcano (Kazan mud volcano, East Mediterranean Sea). FEMS Microbiology Ecology, 72(3), 429-444, https://doi.org/10.1111/j.1574-6941.2010.00857.x
    Publication Date: 2023-05-12
    Description: We investigated 16S rRNA gene diversity at a high sediment depth resolution (every 5 cm, top 30 cm) in an active site of the Kazan mud volcano, East Mediterranean Sea. A total of 242 archaeal and 374 bacterial clones were analysed, which were attributed to 38 and 205 unique phylotypes, respectively (〉=98% similarity). Most of the archaeal phylotypes were related to ANME-1, -2 and -3 members originating from habitats where anaerobic oxidation of methane (AOM) occurs, although they occurred in sediment layers with no apparent AOM (below the sulphate depletion depth). Proteobacteria were the most abundant and diverse bacterial group, with the Gammaproteobacteria dominating in most sediment layers and these were related to phylotypes involved in methane cycling. The Deltaproteobacteria included several of the sulphate-reducers related to AOM. The rest of the bacterial phylotypes belonged to 15 known phyla and three unaffiliated groups, with representatives from similar habitats. Diversity index H was in the range 0.56-1.73 and 1.47-3.82 for Archaea and Bacteria, respectively, revealing different depth patterns for the two groups. At 15 and 20 cm below the sea floor, the prokaryotic communities were highly similar, hosting AOM-specific Archaea and Bacteria. Our study revealed different dominant phyla in proximate sediment layers.
    Keywords: CDRILL; Core drilling; Eastern Mediterranean Sea; HERMIONE; Hotspot Ecosystem Research and Mans Impact On European Seas; Kazan-MV
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2022-05-26
    Description: Author Posting. © The Author(s), 2014. This is the author's version of the work. It is posted here by permission of John Wiley & Sons for personal use, not for redistribution. The definitive version was published in Journal of Eukaryotic Microbiology 61 (2014): 434-445, doi:10.1111/jeu.12122.
    Description: Studies of microbial communities in areas of the world where permanent marine water column oxyclines exist suggest they are ‘hotspots’ of microbial activity, and that these water features and the anoxic waters below them are inhabited by diverse protist taxa, including ciliates. These communities have minimal taxonomic overlap with those in overlying oxic water columns. Some ciliate taxa have been detected in multiple locations where these stable water column oxyclines exist, however, differences in such factors as hydrochemistry in the habitats that have been studied suggest local selection for distinct communities. We compare published data on ciliate communities from studies of deep marine water column oxyclines in Caricao Basin, Venezuela, and the Black Sea, with data from coastal, shallower oxycline waters in Framvaren and Mariager fjords, and from several deep-sea hypersaline anoxic basins (DHABs) in the Eastern Mediterranean Sea. Putative symbioses between Bacteria, Archaea, and ciliates observed along these oxyclines suggests a strategy of cooperative metabolism for survival that includes chemosynthetic autotrophy and exchanges of metabolic intermediates or end products between hosts and their prokaryotic partners.
    Description: Edgcomb’s Cariaco work was a collaboration with G. Taylor (Stony Brook U.) and S. Epstein (Northeastern U.) (MCB-0348407 to VE), her DHAB work was a collaboration with J.M. Bernhard (WHOI), K. Kormas (U. Thessaly), M. Yakimov (CNRS), and T. Stoeck (U. Kaiserslautern) (NSF OCE-0849578 to VE and JMB).
    Description: 2015-05-07
    Keywords: Ciliate ; Oxycline ; Marine ; Water column ; Permanently-stratified
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
    Format: image/tiff
    Format: image/jpeg
    Format: application/pdf
    Location Call Number Limitation Availability
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