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  • BC; Binary Object; Binary Object (File Size); Binary Object (Media Type); Box corer; Cnidaria; Deep-sea mining; File content; GPF 20‐3_089H, NAPTRAM; iAtlantic; Integrated Assessment of Atlantic Marine Ecosystems in Space and Time; Jellyfish; Lurefjord_Norway_Periphylla_Sampling_1; Norwegian fjord; ocean warming; Periphylla periphylla; SO279; SO279_8-1; Sognefjord_Norway_Periphylla_Sampling_2; Sonne_2; South Atlantic Ocean; Transcriptomic analysis; Transcriptomics  (1)
  • BC; Binary Object; Binary Object (File Size); Binary Object (Media Type); Box corer; Cnidaria; Deep-sea mining; File content; GPF 20‐3_089H, NAPTRAM; iAtlantic; Integrated Assessment of Atlantic Marine Ecosystems in Space and Time; Jellyfish; Lurefjord_Norway_Periphylla_Sampling_1; microbiome; Norwegian fjord; ocean warming; Periphylla periphylla; SO279; SO279_8-1; Sognefjord_Norway_Periphylla_Sampling_2; Sonne_2; South Atlantic Ocean  (1)
  • Benthic fauna  (1)
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  • 1
    Publication Date: 2024-06-25
    Description: This dataset comprises the microbial community composition associated with the outer bell of the deep pelagic jellyfish Periphylla periphylla exposed to anthropogenic disturbance. Specifically, we tested the effects of ocean warming and sediment plumes from deep-sea mining during ex situ experiments, using Periphylla collected in the Lurefjord and Sognefjord, Norway, in 2021. Microbial community composition is given in raw counts for each amplicon sequence variant (ASV) encountered, based on 16S rRNA sequencing. Taxonomy for each ASV is listed, including Kingdom, Phylum, Class, Order, Family, Genus and Species, which were assigned using QIIME2 and the Silva 132 99% OTUs 16S rRNA database (Quast et al. 2013).
    Keywords: BC; Binary Object; Binary Object (File Size); Binary Object (Media Type); Box corer; Cnidaria; Deep-sea mining; File content; GPF 20‐3_089H, NAPTRAM; iAtlantic; Integrated Assessment of Atlantic Marine Ecosystems in Space and Time; Jellyfish; Lurefjord_Norway_Periphylla_Sampling_1; microbiome; Norwegian fjord; ocean warming; Periphylla periphylla; SO279; SO279_8-1; Sognefjord_Norway_Periphylla_Sampling_2; Sonne_2; South Atlantic Ocean
    Type: Dataset
    Format: text/tab-separated-values, 2 data points
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2024-06-25
    Description: This dataset comprises gene expression data in the deep pelagic jellyfish Periphylla periphylla exposed to anthropogenic disturbance. Specifically, we tested the effects of ocean warming and sediment plumes from deep-sea mining during ex situ experiments, using Periphylla collected in the Lurefjord and Sognefjord, Norway, in 2021. Gene expression is given in normalised counts for each expressed transcript (for both the temperature and suspended sediment separately). Moreover, this dataset lists all significantly expressed transcripts and their summary statistics (e.g. log2 fold change), as identified with Likelihood Ratio Tests (LRT) in DESeq2 (Love et al. 2014), in addition to transcript annotations performed with Trinotate v3.2.1 searching the Blastx, Blastp, Pfam, UniProt-SwissProt, GO, eggNOG and KEGG databases (Bryant et al. 2017).
    Keywords: BC; Binary Object; Binary Object (File Size); Binary Object (Media Type); Box corer; Cnidaria; Deep-sea mining; File content; GPF 20‐3_089H, NAPTRAM; iAtlantic; Integrated Assessment of Atlantic Marine Ecosystems in Space and Time; Jellyfish; Lurefjord_Norway_Periphylla_Sampling_1; Norwegian fjord; ocean warming; Periphylla periphylla; SO279; SO279_8-1; Sognefjord_Norway_Periphylla_Sampling_2; Sonne_2; South Atlantic Ocean; Transcriptomic analysis; Transcriptomics
    Type: Dataset
    Format: text/tab-separated-values, 2 data points
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2022-05-25
    Description: Author Posting. © The Author(s), 2017. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Marine Ecology Progress Series 566 (2017): 17-29, doi:10.3354/meps12058.
    Description: Shipwrecks can be considered island-like habitats on the seafloor. We investigated the fauna of eight historical shipwrecks off the east coast of the U.S. to assess whether species distribution patterns on the shipwrecks fit models from classical island theory. Invertebrates on the shipwrecks included both sessile (sponges, anemones, hydroids) and motile (crustaceans, echinoderms) species. Invertebrate communities were significantly different among wrecks. The size and distance between wrecks influenced the biotic communities, much like on terrestrial islands. However, while wreck size influenced species richness (alpha diversity), distance to the nearest wreck influenced community composition (beta diversity). Alpha and beta diversity on the shipwrecks were thus influenced by different abiotic factors. We found no evidence of either nested patterns or non-random co-occurrence of morphotypes, suggesting that the taxa on a given shipwreck were randomly selected from the available taxon pool. Species present on the shipwrecks generally had one of two reproductive modes: most motile or solitary sessile species had long-duration planktotrophic larvae, while most encrusting or colonial sessile species had short-duration lecithotrophic larvae and underwent asexual reproduction by budding as adults. Short-duration larvae may recruit to their natal shipwreck, allowing them to build up dense populations and dominate the wreck surfaces. A high degree of dominance was indeed observed on the wrecks, with up to 80% of the fauna being accounted for by the most common species alone. By comparing the shipwreck communities to known patterns of succession in shallow water, we hypothesize that the shipwrecks are in a stage of mid-succession.
    Description: This material is based upon work supported by the National Science Foundation Graduate Research Fellowship Program under Grant No. DGE-0829517. Funding for this project was supplied by the Bureau of Ocean Energy Management (BOEM), under contract to CSA Ocean Sciences, Inc. (contract M10PC00100) in partnership with the National Oceanographic 377 Partnership Program.
    Keywords: Island biogeography ; Assembly rules ; Artificial reef ; Succession ; Benthic fauna ; Continental shelf ; ROV ; Video analysis
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
    Location Call Number Limitation Availability
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