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  • Acetate; Adenine; Adenosine diphosphate; Adenosine monophosphate; Adenosine triphosphate; Alanine; Analysis; Analysis date/time, experiment; Anserine; Arginine; Aspartate; betaine; Betaine; by-product; Carnitine; Choline; Creatine; Creatine phosphate; Creatinine; D-Glucose 6-phosphate; Dimethylamine; Dimethyl sulfone; Experiment; Experiment number; Formate; Fumarate; Glutamate; Glutamine; Glycine; Identification; insect meal; Isoleucine; Laboratory experiment; Lactate; Leucine; Location; Malonate; Material; Methionine; Method comment; N,N-Dimethylglycine; Nuclear magnetic resonance spectrometer (NMR), Bruker, Avance III HD 400; O-Phosphocholine; Proline; Sample, optional label/labor no; Sample ID; Sampling date/time, experiment; Sarcosine; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Succinate; Tank number; Taurine; Threonine; Time point, descriptive; TMAO; Treatment; Trimethylamine N-oxide; Type of study; Valine  (1)
  • Acid-base regulation; Alkalinity, total; Animalia; Aragonite saturation state; Behaviour; Benthic animals; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; Condition index; Coulometric titration; Dry mass; EXP; Experiment; Factorial aerobic scope; Force; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Haemolymph, bicarbonate ion; Haemolymph, partial pressure of carbon dioxide; Haemolymph, partial pressure of oxygen; Haemolymph, pH; Haemolymph, total carbon dioxide; Height; Identification; Laboratory experiment; Length; Metabolic rate of oxygen; Mollusca; Muscle condition index; Net aerobic scope; North Atlantic; Number of claps; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pecten maximus; pH; pH, standard deviation; Potentiometric; Respiration; Roscoff_OA; Salinity; Salinity, standard deviation; Single species; Species; Temperate; Temperature; Temperature, water; Temperature, water, standard deviation; Time in hours; Time in minutes; Treatment; Width  (1)
  • Alkalinity, total; Animalia; Aragonite saturation state; Benthic animals; Benthos; Bicarbonate ion; Body mass, dry; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Category; Coast and continental shelf; Condition factor; Containers and aquaria (20-1000 L or 〈 1 m**2); Cromarty_Bay; EXP; Experiment; Experiment duration; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Identification; Laboratory experiment; Mollusca; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Registration number of species; Saccostrea glomerata; Salinity; Shell, dry mass; Single species; South Pacific; Species; Table; Temperate; Temperature, water; Time point, descriptive; Treatment; Type; Uniform resource locator/link to reference  (1)
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  • 1
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Animalia; Aragonite saturation state; Benthic animals; Benthos; Bicarbonate ion; Body mass, dry; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Category; Coast and continental shelf; Condition factor; Containers and aquaria (20-1000 L or 〈 1 m**2); Cromarty_Bay; EXP; Experiment; Experiment duration; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Identification; Laboratory experiment; Mollusca; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Registration number of species; Saccostrea glomerata; Salinity; Shell, dry mass; Single species; South Pacific; Species; Table; Temperate; Temperature, water; Time point, descriptive; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 1670 data points
    Location Call Number Limitation Availability
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  • 2
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    Unknown
    PANGAEA
    In:  Supplement to: Schalkhausser, Burgel; Bock, Christian; Pörtner, Hans-Otto; Lannig, Gisela (2014): Escape performance of temperate king scallop, Pecten maximus under ocean warming and acidification. Marine Biology, 161(12), 2819-2829, https://doi.org/10.1007/s00227-014-2548-x
    Publication Date: 2024-03-15
    Description: Among bivalves, scallops are exceptional due to their capacity to escape from predators by swimming which is provided by rapid and strong claps that are produced by the phasic muscle interspersed with tonic muscle contractions. Based on the concept of oxygen and capacity-limited thermal tolerance, the following hypothesis was tested: ocean warming and acidification (OWA) would induce disturbances in aerobic metabolic scope and extracellular acid-case status and impair swimming performance in temperate scallops. Following long-term incubation under near-future OWA scenarios [20 vs. 10 °C (control) and 0.112 kPa CO2 (hypercapnia) vs. 0.040 kPa CO2 (normocapnic control)], the clapping performance and metabolic rates (MR) were measured in resting (RMR) and fatigued (maximum MR) king scallops, Pecten maximus, from Roscoff, France. Exposure to OA, either alone or combined with warming, left MR and swimming parameters such as the total number of claps and clapping forces virtually unchanged. Only the duration of the escape response was affected by OA which caused earlier exhaustion in hyper- than in normocapnic scallops at 10 °C. While maximum MR was unaffected, warm exposure increased RMR in both normocapnic and hypercapnic P. maximus resulting in similar Q 10 values of ~2.2. The increased costs of maintenance and the observation of strongly reduced haemolymph PO2 levels indicate that at 20 °C scallops have reached the upper thermal pejus range with unbalanced capacities for aerobic energy metabolism. As a consequence, warming to 20 °C decreased mean phasic force during escape performance until fatigue. The observed prolonged recovery time in warm incubated scallops might be a consequence of elevated metabolic costs at reduced oxygen availability in the warmth.
    Keywords: Acid-base regulation; Alkalinity, total; Animalia; Aragonite saturation state; Behaviour; Benthic animals; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; Condition index; Coulometric titration; Dry mass; EXP; Experiment; Factorial aerobic scope; Force; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Haemolymph, bicarbonate ion; Haemolymph, partial pressure of carbon dioxide; Haemolymph, partial pressure of oxygen; Haemolymph, pH; Haemolymph, total carbon dioxide; Height; Identification; Laboratory experiment; Length; Metabolic rate of oxygen; Mollusca; Muscle condition index; Net aerobic scope; North Atlantic; Number of claps; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pecten maximus; pH; pH, standard deviation; Potentiometric; Respiration; Roscoff_OA; Salinity; Salinity, standard deviation; Single species; Species; Temperate; Temperature; Temperature, water; Temperature, water, standard deviation; Time in hours; Time in minutes; Treatment; Width
    Type: Dataset
    Format: text/tab-separated-values, 3046 data points
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2024-06-12
    Description: This study examined the metabolic response of juvenile turbot (Scophthalmus maximus) to diets with graded fishmeal (FM) replacement with plant, animal, and emerging protein sources (PLANT, PAP, and MIX) in comparison to a commercial-like diet (CTRL). The feeding experiment was carried out from April to July 2019 in the Centre for Aquaculture Research (ZAF) at the Alfred Wegener Institute for Polar and Marine research in Bremerhaven, Germany. The juvenile turbot (Scophthalmus maximus) were purchased from France Turbot (L'Épine, France) and acclimated to the recirculating aquaculture system (RAS) for 2 weeks prior to starting the 16 weeks experimental trial. To elucidate the effects of the protein sources and the level of FM replacement on the metabolic response of the fish, a 1H‐nuclear magnetic resonance (NMR) spectroscopy was used to assess the metabolic profiles of muscle and liver tissue after feeding the fish the experimental diets for 16 weeks. Feed, muscle, and liver samples were ground under liquid nitrogen and approx. 200–250 mg tissue was homogenized in 5x volume of ice‐cold 0.6 M perchloric acid (PCA) (w:v). After one cycle of 20 s at 6000 rpm and 3 °C, using Precellys 24 (Bertin Technologies, Montigny‐le‐Bretonneux, France), samples were sonicated for 2 min at 0 °C and 360 W (Branson Sonifier 450, FisherScientific, Schwerte, Germany). Homogenates of the experimental diets, muscle and liver tissues were centrifuged for 2 min at 0 °C and 16,000 g, and supernatants were neutralized with ice cold potassium hydroxide (KOH) and PCA to pH 7.0–7.5. To remove precipitated potassium, perchlorate samples were centrifuged again for 2 min at 0 °C and 16,000 g. The entire supernatant was transferred, shock‐ frozen in liquid nitrogen, and stored an −80 °C for later analysis. One‐dimensional 1H‐NMR spectra for feed and tissues extracts were acquired using a vertical 9.4 T wide bore magnet with Avance III HD (Bruker‐GmbH, Ettlingen, Germany) at 400.13 MHz with a 1.7 mm diameter triple tuned (1H‐13C‐15N) probe. Each spectrum was processed and analyzed with Chenomx NMR Suite 8.4 software (Chenomx Inc., Edmonton, Canada). Before analyzing, the spectra were corrected for phase, shim and baseline and calibrated to trymethylsilyl proprionate (TSP) signal (at 0.0 ppm).
    Keywords: Acetate; Adenine; Adenosine diphosphate; Adenosine monophosphate; Adenosine triphosphate; Alanine; Analysis; Analysis date/time, experiment; Anserine; Arginine; Aspartate; betaine; Betaine; by-product; Carnitine; Choline; Creatine; Creatine phosphate; Creatinine; D-Glucose 6-phosphate; Dimethylamine; Dimethyl sulfone; Experiment; Experiment number; Formate; Fumarate; Glutamate; Glutamine; Glycine; Identification; insect meal; Isoleucine; Laboratory experiment; Lactate; Leucine; Location; Malonate; Material; Methionine; Method comment; N,N-Dimethylglycine; Nuclear magnetic resonance spectrometer (NMR), Bruker, Avance III HD 400; O-Phosphocholine; Proline; Sample, optional label/labor no; Sample ID; Sampling date/time, experiment; Sarcosine; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Succinate; Tank number; Taurine; Threonine; Time point, descriptive; TMAO; Treatment; Trimethylamine N-oxide; Type of study; Valine
    Type: Dataset
    Format: text/tab-separated-values, 6200 data points
    Location Call Number Limitation Availability
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