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  • Accession number, genetics; Amplicon sequence variant; aquifer; biogeochemistry; Canadian Prairie; Class; communities; DATE/TIME; Event label; Family; Field measurement; Genus; GOWN_Airdrie; GOWN_Barons; GOWN_Canmore; GOWN_Canmore_Tourist; GOWN_Carmangay; GOWN_Cavendish; GOWN_Cochrane_Shallow; GOWN_Crestomere; GOWN_Cynthia; GOWN_Devon_Botanical_Garden; GOWN_Dewberry; GOWN_Forty_Mile_Coulee; GOWN_Gem_66_7; GOWN_Grimshaw_Nissan; GOWN_Hamilin; GOWN_Hardisty; GOWN_Hays_East; GOWN_Kirkpatrick; GOWN_Leedale_Deep; GOWN_Leedale_Shallow; GOWN_Meander_River; GOWN_Metiskow; GOWN_Moose_Lake; GOWN_Morningside; GOWN_Okotoks_N; GOWN_Ponoka; GOWN_Rockyford; GOWN_Rollyview; GOWN_Rosebud; GOWN_Ross_Creek; GOWN_Sounding_Creek; GOWN_Stettler_North; GOWN_Stettler_South; GOWN_Sundre_North; GOWN_Sundre_South; GOWN_Wainwright; GOWN_Warburg; GOWN_Warner; groundwater; Kingdom; LATITUDE; LONGITUDE; microbes; Order; Phylum; Sample code/label; Sample code/label 2; Sequence abundance; Sequence identifier; Species; Well; Well, identifier  (1)
  • Biogeochemistry  (1)
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  • 1
    Publication Date: 2023-12-31
    Description: Groundwater ecosystems are globally widespread yet still poorly understood. We investigated the microbiology of 〉100 groundwater samples from 90 monitoring wells (〈250m depth) located in 14 aquifers in the Canadian Prairie. This dataset contains relative abundances of archaeal lineages based on 16S rRNA gene amplicons retrieved from 52 groundwater samples of aquifers in the Canadian Prairie, collected between 2015 and 2020. The study area comprised 14 major aquifers and a geographic area of ~210.000 km2. The goal of the study was to understand the links between the biogeochemistry and microbial ecology of groundwater ecosystems in diverse geological settings on a broad spatial scale. Details concerning DNA extraction, sequencing and sequence analyses can be found in the associated publication by Ruff et al. 2023.
    Keywords: Accession number, genetics; Amplicon sequence variant; aquifer; biogeochemistry; Canadian Prairie; Class; communities; DATE/TIME; Event label; Family; Field measurement; Genus; GOWN_Airdrie; GOWN_Barons; GOWN_Canmore; GOWN_Canmore_Tourist; GOWN_Carmangay; GOWN_Cavendish; GOWN_Cochrane_Shallow; GOWN_Crestomere; GOWN_Cynthia; GOWN_Devon_Botanical_Garden; GOWN_Dewberry; GOWN_Forty_Mile_Coulee; GOWN_Gem_66_7; GOWN_Grimshaw_Nissan; GOWN_Hamilin; GOWN_Hardisty; GOWN_Hays_East; GOWN_Kirkpatrick; GOWN_Leedale_Deep; GOWN_Leedale_Shallow; GOWN_Meander_River; GOWN_Metiskow; GOWN_Moose_Lake; GOWN_Morningside; GOWN_Okotoks_N; GOWN_Ponoka; GOWN_Rockyford; GOWN_Rollyview; GOWN_Rosebud; GOWN_Ross_Creek; GOWN_Sounding_Creek; GOWN_Stettler_North; GOWN_Stettler_South; GOWN_Sundre_North; GOWN_Sundre_South; GOWN_Wainwright; GOWN_Warburg; GOWN_Warner; groundwater; Kingdom; LATITUDE; LONGITUDE; microbes; Order; Phylum; Sample code/label; Sample code/label 2; Sequence abundance; Sequence identifier; Species; Well; Well, identifier
    Type: Dataset
    Format: text/tab-separated-values, 1530716 data points
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2022-05-26
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Microbiology 4 (2013): 189, doi:10.3389/fmicb.2013.00189.
    Description: The vast marine deep biosphere consists of microbial habitats within sediment, pore waters, upper basaltic crust and the fluids that circulate throughout it. A wide range of temperature, pressure, pH, and electron donor and acceptor conditions exists—all of which can combine to affect carbon and nutrient cycling and result in gradients on spatial scales ranging from millimeters to kilometers. Diverse and mostly uncharacterized microorganisms live in these habitats, and potentially play a role in mediating global scale biogeochemical processes. Quantifying the rates at which microbial activity in the subsurface occurs is a challenging endeavor, yet developing an understanding of these rates is essential to determine the impact of subsurface life on Earth's global biogeochemical cycles, and for understanding how microorganisms in these “extreme” environments survive (or even thrive). Here, we synthesize recent advances and discoveries pertaining to microbial activity in the marine deep subsurface, and we highlight topics about which there is still little understanding and suggest potential paths forward to address them. This publication is the result of a workshop held in August 2012 by the NSF-funded Center for Dark Energy Biosphere Investigations (C-DEBI) “theme team” on microbial activity (www.darkenergybiosphere.org).
    Description: Funding for the meeting was provided by C-DEBI, a US National Science Foundation (NSF)-funded Science and Technology Center (OCE-0939564). Funding for this publication was provided, in part, by NSF (OCE-1233226 to BNO).
    Keywords: Deep biosphere ; IODP ; Biogeochemistry ; Sediment ; Oceanic crust ; C-DEBI ; Subsurface microbiology
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
    Location Call Number Limitation Availability
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