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  • Red algae  (3)
  • Accession number, genetics; Algae cultivation; Antioxidant activity; Antioxidant capacity, in Trolox Equivalents; Artificial seawater; AWI_Bremerhaven_FunctEcologyLab; Bremerhaven, Germany; Concentration; DATE/TIME; Date/time end; Date/time start; DEPTH, water; Event label; Experiment duration; Industrietaugliche Verfahrensoptimierung zur Herstellung einer nachhaltigen Verpackungslösung aus Makroalgen für den Lebensmittel-Handel; Laboratory; Laboratory experiment; LATITUDE; Light intensity; Light meter, LI-COR Biosciences GmbH, LI-250A; LONGITUDE; Mak-Pak_Scale-Up; Microplate reader, Tecan Trading AG, Infinite 200; NEAtlantic_Ulva_2021; North East Atlantic; Nutrient; Origin; Recirculating Aquaculture System; Refractometer, Atago, S-10E; Replicate; Salinity; Species; Temperature, water; Temperature data logger, Ebro, EBI 20-T1; Treatment: light:dark cycle; Treatment: salinity; Type of study; Ulva sp.  (1)
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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Current genetics 17 (1990), S. 255-259 
    ISSN: 1432-0983
    Keywords: Red algae ; psbA gene ; Plastid evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Plastid DNA (ptDNA) from the unicellular red alga Cyanidium caldarium was isolated. A 5.8 kb Eco RI, fragment containing the entire psbA-gene was cloned and the nucleotide sequence of the psbA-gene determined. At the carboxyl terminus the encoded protein (D1) contains the seven amino acid-insertion which was found to be typical of the cyanobacteria and the cyanelles of Cyanophora paradoxa. However, the overall sequence homology does not support a direct relationship between the plastids of Cyanidium, cyanelles and the cyanobacteria. As in other photosynthetic organisms the psbA-gene is transcribed as a monocistronic mRNA. The ribosomal RNA operon was located 4 kb upstream of the psbA-gene.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1432-0983
    Keywords: Red algae ; ptDNA ; Ribulose-1,5-bisphosphate carboxylase ; Plastid evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Plastid (pt) DNA from the red alga Porphyridium aerugineum was purified by CsCI gradient centrifugation. An EcoRI library of the ptDNA was screened with a gene probe specific for the gene encoding the large subunit (LSU) of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco EC 4.1.1.39) from spinach. A 5.8 kb EcoRI clone containing the LSU gene (rbcL) was isolated and the DNA sequence of the Porphyridium rbcL gene and its flanking regions was determined. An open reading frame was found 130 by downstream from the rbcL gene that shows homology to genes coding for the small subunit of Rubisco (rbcS) from higher plants and cyanobacteria. Both genes (rbcL + rbcS) are cotranscribed. Comparison of rbcL and rbcS sequences from Porphyridium, higher plants and cyanobacteria seems to reveal a remarkable evolutionary distance between the plastids of the red algae (rhodoplasts), chloroplasts and cyanobacteria.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1432-0983
    Keywords: Red algae ; Plastid evolution ; Ribulose-1,5-bisphosphate carboxylase/oxygenase ; Plastid DNA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary In the multicellular red alga Antithamnion spec. both rubisco genes (rbcL and rbcS) are encoded on the plastid DNA (ptDNA). Both genes are separated by a short A/T-rich spacer of 100 bp and are cotranscribed into an mRNA of approximately 2.7 kb. These findings are in extensive agreement with those obtained from two unicellular red algae (Porphyridium aerugineum and Cyanidium caldarium). The large subunit (LSU) of rubisco shows an amino acid homology of 82–87% with the LSUs from the two unicellular red algae and only about 55% to LSUs from green algae, higher plants and two cyanobacteria. The small subunit (SSU) of rubisco is more similar to those from the unicellular red algae and two algae which are members of the Chromophyta (about 60% homology) than to cyanobacterial and higher plant proteins (27–36% homology). These data indicate that rhodoplasts originated independently from the chloroplast line. The plastids of chromophytes and rhodophytes appear to be closely related.
    Type of Medium: Electronic Resource
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  • 4
    Publication Date: 2023-07-18
    Description: In the paper "Salinity as a tool for strain selection in recirculating land-based production of Ulva spp. from germlings to adults" (Cardoso et al. 2023) the antioxidant activity (AA) experiment aimed to test a previously selected strain, Ulva lacinulata from the NE-Atlantic, and evaluate the variations in AA under different salinity treatments. We hypothesized that by reducing the salinity level in the recirculating land-based system, it would be possible to optimize and increase the quality of the biomass being produced before it being harvested. The NE-Atlantic seaweed was collected in the Óbidos Lagoon, Portugal in January 2021 and was cultivated in laboratory conditions in the Alfred Wegener Institute (AWI), Bremerhaven, Germany. To recreate the conditions of a large-scale system, the strain was grown previously and during the experiment in a medium of artificial seawater (Seequasal-Salz, Seequasal Salz Production and Trade GmbH, Münster, Germany) enriched with a cheaper commercial fertilizer Blaukorn (COMPO SANA®, Germany). Twelve 1 L beakers were filled with artificial seawater at 4 different salinities (10, 15, 20 and 30 PSU), measured with a refractometer (Atago, Japan) (n = 3). Six discs (2 cm) of U. lacinulata were placed in each beaker and, at different times (0 h, 3 h, 24 h, 120 h, 192 h and 240 h) 1 disc was collected from each beaker to evaluate the antioxidant activity. The AA was determined by the ABTS Radical Cation Decolourisation Assay based on Re et al., 1999, and a Trolox standard curve was created by measuring the absorption of different Trolox concentrations in ethanol after being mixed with ABTS. The absorption of the samples at 734 nm was analysed with a microplate reader (Infinite 200 Microplate Reader, Tecan Trading AG, Männedorf, Switzerland) and the AA results obtained were given in Trolox Equivalent (in µg/mL).
    Keywords: Accession number, genetics; Algae cultivation; Antioxidant activity; Antioxidant capacity, in Trolox Equivalents; Artificial seawater; AWI_Bremerhaven_FunctEcologyLab; Bremerhaven, Germany; Concentration; DATE/TIME; Date/time end; Date/time start; DEPTH, water; Event label; Experiment duration; Industrietaugliche Verfahrensoptimierung zur Herstellung einer nachhaltigen Verpackungslösung aus Makroalgen für den Lebensmittel-Handel; Laboratory; Laboratory experiment; LATITUDE; Light intensity; Light meter, LI-COR Biosciences GmbH, LI-250A; LONGITUDE; Mak-Pak_Scale-Up; Microplate reader, Tecan Trading AG, Infinite 200; NEAtlantic_Ulva_2021; North East Atlantic; Nutrient; Origin; Recirculating Aquaculture System; Refractometer, Atago, S-10E; Replicate; Salinity; Species; Temperature, water; Temperature data logger, Ebro, EBI 20-T1; Treatment: light:dark cycle; Treatment: salinity; Type of study; Ulva sp.
    Type: Dataset
    Format: text/tab-separated-values, 1147 data points
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