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  • Climate - Biogeochemistry Interactions in the Tropical Ocean; SFB754  (2)
  • AHP; AHS; AKO; Allele; BAR; Code; Date/Time of event; DIVER; ECK; ESH; Event label; FLB; FSD; GEO; GLT; GRO; GWZ; HEL; HLG; HON; Identification; KAP; LATITUDE; Location; LONGITUDE; MAH; Mussels_Aarhus; Mussels_Ahrenshoop; Mussels_Askoe; Mussels_Barhoeft; Mussels_Dranske; Mussels_Eckernfoerde; Mussels_Fehmarnsund; Mussels_Flensburg; Mussels_Gelting; Mussels_Gollwitz; Mussels_Groemitz; Mussels_Hel; Mussels_Helgoland; Mussels_Kappeln; Mussels_KielFjord_Eastshore; Mussels_KielFjord_GEOMAR; Mussels_KielFjord_Hoern; Mussels_KielFjord_ShipMuseum; Mussels_Maasholm; Mussels_PennCove; Mussels_Steinbeck; Mussels_Tjaernoe; Mussels_Usedom; Mussels_Warnemuende; Mussels_Wendtorf; PCO; RUD; Sample code/label; Sampling by diver; SMU; STB; TJ; USE; WMU; WNF  (1)
  • AHP; Ahrenshoop_Mytilus; bicarbonate; calcification; calcium; Calcium carbonate, mass; Climate change; DEPTH, water; ESIR; Event label; Identification; KIEL; Kiel_Mytilus; MULT; Multiple investigations; Omega; Salinity; Sampling date; Shell length; SIR; Species; USE; Usedom_Mytilus  (1)
  • Acid-base regulation; Alkalinity, total; Animalia; Aragonite saturation state; Baltic Sea; Benthic animals; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calcium; Calcium per individual; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; delta; Experiment; Fluorescence; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Laboratory experiment; Mollusca; Mytilus edulis; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Registration number of species; Replicate; Salinity; Shell length; Shell length, standard deviation; Single species; Species; Temperate; Temperature, water; Time in hours; Type; Uniform resource locator/link to reference  (1)
  • Adenosine triphosphatase activity; BIOACID; Biological Impacts of Ocean Acidification; Change in Sodium/potassium ATPase alpha subunit expression; Replicates; Sodium/Potassium adenosine triphosphatase activity; Species; Standard deviation; Type  (1)
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  • 1
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    PANGAEA
    In:  Supplement to: Stuckas, Heiko; Knöbel, Loreen; Schade, Hanna; Breusing, Corinna; Hinrichsen, Hans-Harald; Bartel, Anja; Langguth, Klaudia; Melzner, Frank (2017): Combining hydrodynamic modelling with genetics: Can passive larval drift shape the genetic structure of Baltic Mytilus populations? Molecular Ecology, https://doi.org/10.1111/mec.14075
    Publication Date: 2023-01-13
    Description: While secondary contact between Mytilus edulis and M. trossulus in North America results in mosaic hybrid zone formation, both species form a hybrid swarm in the Baltic. Despite pervasive gene flow, Baltic Mytilus species maintain substantial genetic and phenotypic differentiation. Exploring mechanisms underlying the contrasting genetic composition in Baltic Mytilus species will allow insights into processes such as speciation or adaptation to extremely low salinity. Previous studies in the Baltic indicated that only weak interspecific reproductive barriers exist and discussed the putative role of adaptation to environmental conditions. Using a combination of hydrodynamic modelling and multilocus genotyping we investigate how oceanographic conditions influence passive larval dispersal and hybrid swarm formation in the Baltic. By combining our analyses with previous knowledge we show a genetic transition of Baltic Mytilus species along longitude 12°-13°E, i.e. a virtual line between Malmö (Sweden) and Stralsund (Germany). Although larval transport only occurs over short distances (10-30 km), limited larval dispersal could not explain the position of this genetic transition zone. Instead, the genetic transition zone is located at the area of maximum salinity change (15 to 10 psu). Thus, we argue that selection results in weak reproductive barriers and local adaptation. This scenario could maintain genetic and phenotypic differences between Baltic Mytilus species despite pervasive introgressive hybridization.
    Keywords: AHP; AHS; AKO; Allele; BAR; Code; Date/Time of event; DIVER; ECK; ESH; Event label; FLB; FSD; GEO; GLT; GRO; GWZ; HEL; HLG; HON; Identification; KAP; LATITUDE; Location; LONGITUDE; MAH; Mussels_Aarhus; Mussels_Ahrenshoop; Mussels_Askoe; Mussels_Barhoeft; Mussels_Dranske; Mussels_Eckernfoerde; Mussels_Fehmarnsund; Mussels_Flensburg; Mussels_Gelting; Mussels_Gollwitz; Mussels_Groemitz; Mussels_Hel; Mussels_Helgoland; Mussels_Kappeln; Mussels_KielFjord_Eastshore; Mussels_KielFjord_GEOMAR; Mussels_KielFjord_Hoern; Mussels_KielFjord_ShipMuseum; Mussels_Maasholm; Mussels_PennCove; Mussels_Steinbeck; Mussels_Tjaernoe; Mussels_Usedom; Mussels_Warnemuende; Mussels_Wendtorf; PCO; RUD; Sample code/label; Sampling by diver; SMU; STB; TJ; USE; WMU; WNF
    Type: Dataset
    Format: text/tab-separated-values, 6267 data points
    Location Call Number Limitation Availability
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  • 2
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    PANGAEA
    In:  Supplement to: Hu, Marian Y; Sucre, Elliott; Charmantier-Daures, Mireille; Charmantier, Guy; Lucassen, Magnus; Himmerkus, Nina; Melzner, Frank (2010): Localization of ion-regulatory epithelia in embryos and hatchlings of two cephalopods. Cell and Tissue Research, 339(3), 571-583, https://doi.org/10.1007/s00441-009-0921-8
    Publication Date: 2023-02-24
    Description: The tissue distribution and ontogeny of Na+/K+-ATPase has been examined as an indicator for ion-regulatory epithelia in whole animal sections of embryos and hatchlings of two cephalopod species: the squid Loligo vulgaris and the cuttlefish Sepia officinalis. This is the first report of the immunohistochemical localization of cephalopod Na+/K+-ATPase with the polyclonal antibody alpha (H-300) raised against the human alpha1-subunit of Na+/K+-ATPase. Na+/K+-ATPase immunoreactivity was observed in several tissues (gills, pancreatic appendages, nerves), exclusively located in baso-lateral membranes lining blood sinuses. Furthermore, large single cells in the gill of adult L. vulgaris specimens closely resembled Na+/K+-ATPase-rich cells described in fish. Immunohistochemical observations indicated that the amount and distribution of Na+/K+-ATPase in late cuttlefish embryos was similar to that found in juvenile and adult stages. The ion-regulatory epithelia (e.g., gills, excretory organs) of the squid embryos and paralarvae exhibited less differentiation than adults. Na+/K+-ATPase activities for whole animals were higher in hatchlings of S. officinalis (157.0 ± 32.4 µmol/g FM/h) than in those of L. vulgaris (31.8 ± 3.3 µmol/g FM/h). S. officinalis gills and pancreatic appendages achieved activities of 94.8 ± 18.5 and 421.8 ± 102.3 µmol ATP/g FM/h, respectively. High concentrations of Na+/K+-ATPase in late cephalopod embryos might be important in coping with the challenging abiotic conditions (low pH, high pCO2) that these organisms encounter inside their eggs. Our results also suggest a higher sensitivity of squid vs. cuttlefish embryos to environmental acid-base disturbances.
    Keywords: Adenosine triphosphatase activity; BIOACID; Biological Impacts of Ocean Acidification; Change in Sodium/potassium ATPase alpha subunit expression; Replicates; Sodium/Potassium adenosine triphosphatase activity; Species; Standard deviation; Type
    Type: Dataset
    Format: text/tab-separated-values, 40 data points
    Location Call Number Limitation Availability
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  • 3
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    PANGAEA
    In:  Supplement to: Kiko, Rainer; Hauss, Helena; Dengler, Marcus; Sommer, Stefan; Melzner, Frank (2015): The squat lobster Pleuroncodes monodon tolerates anoxic “dead zone” conditions off Peru. Marine Biology, 162(9), 1913-1921, https://doi.org/10.1007/s00227-015-2709-6
    Publication Date: 2023-10-28
    Description: Sampling was conducted during RV Meteor cruise M93 in austral summer 2013 in an area from 11ºS to 14ºS and approximately 120 km offshore to within 10 km of the Peruvian coast. Specimens were collected using a Hydrobios Multinet Maxi (0.5 m2 mouth opening, 330 µm mesh size, 9 nets) and a WP-2 net (Hydrobios, 0.26 m2 mouth opening, 200 µm mesh size). P. monodon were identified according to http://researchdata.museum.vic.gov.au/squatlobster/delta/deltakey.html. Specimens were transferred into filtered, well-oxygenated seawater immediately after the catch and maintained for 4 to 16 hours prior to physiological experiments. Maintenance and physiological experiments were conducted at 13°C as the temperature observed at 100 to 200 m depth in the OMZ ranged from 13.7 to 12.7°C.
    Keywords: Climate - Biogeochemistry Interactions in the Tropical Ocean; SFB754
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 4
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    PANGAEA
    In:  Supplement to: Kiko, Rainer; Hauss, Helena; Buchholz, Friedrich; Melzner, Frank (2016): Ammonium excretion and oxygen respiration of tropical copepods and euphausiids exposed to oxygen minimum zone conditions. Biogeosciences, 13(8), 2241-2255, https://doi.org/10.5194/bg-13-2241-2016
    Publication Date: 2023-10-28
    Description: Respiration and ammonium excretion rates at different oxygen partial pressure were measured for calanoid copepods and euphausiids from the Eastern Tropical South Pacific and the Eastern Tropical North Atlantic. All specimens used for experiments were caught in the upper 400 m of the water column and only animals appearing unharmed and fit were used for experiments. Specimens were sorted, identified and transferred into aquaria with filtered, well-oxygenated seawater immediately after the catch and maintained for 1 to 13 hours prior to physiological experiments at the respective experimental temperature. Maintenance and physiological experiments were conducted in darkness in temperature-controlled incubators at 11, 13 or 23 degree C (±1). Before and during experiments, animals were not fed. Respiration and ammonium excretion rate measurements (both in µmol h-1 gDW-1) at varying oxygen concentrations were conducted in 12 to 60 mL gas-tight glass bottles. These were equipped with oxygen microsensors (ø 3 mm, PreSens Precision Sensing GmbH, Regensburg, Germany) attached to the inner wall of the bottles to monitor oxygen concentrations non-invasively. Read-out of oxygen concentrations was conducted using multi-channel fiber optic oxygen transmitters (Oxy-4 and Oxy-10 mini, PreSens Precision Sensing GmbH, Regensburg, Germany) that were connected via optical fibers to the outside of the bottles directly above the oxygen microsensor spots. Measurements were started at pre-adjusted oxygen and carbon dioxide levels. For this, seawater stocks with adjusted pO2 and pCO2 were prepared by equilibrating 3 to 4 L of filtered (0.2 µm filter Whatman GFF filter) and UV - sterilized (Aqua Cristal UV C 5 Watt, JBL GmbH & Co. KG, Neuhofen, Germany) water with premixed gases (certified gas mixtures from Air Liquide) for 4 hours at the respective experimental temperature. pCO2 levels were chosen to mimic the environmental pCO2 in the ETSP OMZ or the ETNA OMZ. Experimental runs were conducted with 11 to 15 trial incubations (1 or 2 animals per incubation bottle and three different treatment levels) and three animal-free control incubations (one per experimental treatment). During each run, experimental treatments comprised 100% air saturation as well as one reduced air saturation level with and without CO2. Oxygen concentrations in the incubation bottles were recorded every 5 min using the fiber-optic microsensor system and data recording for respiration rate determination was started immediately after all animals were transferred. Respiration rates were calculated from the slope of oxygen decrease over selected time intervals. Chosen time intervals were 20 to 105 min long. No respiration rate was calculated for the first 20 to 60 min after animal transfer to avoid the impact of enhanced activity of the animal or changes in the bottle water temperature during initial handling on the respiration rates and oxygen readings. Respiration rates were obtained over a maximum of 16 hours incubation time and slopes were linear at normoxia to mild hypoxia. Respiration rates in animal-free control bottles were used to correct for microbial activity. These rates were 〈 2% of animal respiration rates at normoxia. Samples for the measurement of ammonium concentrations were taken after 2 to 10 hours incubation time. Ammonium concentration was determined fluorimetrically (Holmes et al., 1999). Ammonium excretion was calculated as the concentration difference between incubation and animal-free control bottles. Some specimens died during the respiration and excretion rate measurements, as indicated by a cessation of respiration. No excretion rate measurements were conducted in this case, but the oxygen level at which the animal died was noted.
    Keywords: Climate - Biogeochemistry Interactions in the Tropical Ocean; SFB754
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2023-11-02
    Description: This data set presents data from field monitoring of calcification rates across 15 months from 3 sites in the South-West Baltic Sea (Kiel fjord, Ahrenshoop and Usedom Island). 50 mussels were sampled from settlement structures at each location at 2 - 3 monthly intervals and shell length/mass were recorded over time to estimate calcification rates in the field related to environmental conditions.
    Keywords: AHP; Ahrenshoop_Mytilus; bicarbonate; calcification; calcium; Calcium carbonate, mass; Climate change; DEPTH, water; ESIR; Event label; Identification; KIEL; Kiel_Mytilus; MULT; Multiple investigations; Omega; Salinity; Sampling date; Shell length; SIR; Species; USE; Usedom_Mytilus
    Type: Dataset
    Format: text/tab-separated-values, 5064 data points
    Location Call Number Limitation Availability
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  • 6
    Publication Date: 2024-03-15
    Description: Understanding mollusk calcification sensitivity to ocean acidification (OA) requires a better knowledge of calcification mechanisms. Especially in rapidly calcifying larval stages, mechanisms of shell formation are largely unexplored—yet these are the most vulnerable life stages. Here we find rapid generation of crystalline shell material in mussel larvae. We find no evidence for intracellular CaCO3 formation, indicating that mineral formation could be constrained to the calcifying space beneath the shell. Using microelectrodes we show that larvae can increase pH and [CO3]2−beneath the growing shell, leading to a ~1.5-fold elevation in calcium carbonate saturation state (Omega arag). Larvae exposed to OA exhibit a drop in pH, [CO3]2− and Omega arag at the site of calcification, which correlates with decreased shell growth, and, eventually, shell dissolution. Our findings help explain why bivalve larvae can form shells under moderate acidification scenarios and provide a direct link between ocean carbonate chemistry and larval calcification rate.
    Keywords: Acid-base regulation; Alkalinity, total; Animalia; Aragonite saturation state; Baltic Sea; Benthic animals; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calcium; Calcium per individual; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; delta; Experiment; Fluorescence; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Laboratory experiment; Mollusca; Mytilus edulis; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Registration number of species; Replicate; Salinity; Shell length; Shell length, standard deviation; Single species; Species; Temperate; Temperature, water; Time in hours; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 13036 data points
    Location Call Number Limitation Availability
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