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  • 1
    ISSN: 1432-2242
    Keywords: Key words Simple sequence repeat (SSR) ; Microsatellites ; Molecular markers ; Genetics ; Fingerprinting
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  We report the sequences of 17 primer pairs of microsatellite loci, which we have cloned and sequenced from two genomic libraries of peach [Prunus persica (L) Batsch] ‘Redhaven’, enriched for AC/GT and AG/CT repeats respectively. For ten of these microsatellite loci we were able to demonstrate Mendelian inheritance in a segregating back-cross population; the remainder did not segregate. The polymorphism of the microsatellites was evaluated in a panel of ten peach genotypes, including true-to-type peaches, nectarines and one canning-peach. Fifteen microsatellites (88%) were polymorphic showing 2–4 alleles each. The mean heterozygosity, averaged over all loci, was 0.32 and significantly higher than that reported in the literature for isozymes and molecular markers, such as RFLPs and RAPDs. We have also assayed the cross-species transportability and found that ten microsatellite (59%) gave apparently correct amplification in all Prunus species surveyed, namely P. domestica (European plum), P. salicina (Japanese plum), P. armeniaca (apricot), P. dulcis (almond), P. persica var. vulgaris (peach), P. persica var. laevis (nectarine), P. avium (sweet cherry) and P. cerasus (sour cherry), with three of them also being amplified in Malus (apple). The remaining microsatellites gave less-extensive amplification. Because of their appreciable polymorphism and wide cross-species transportability, most of these new markers can be integrated into the linkage maps which are currently being constructed in peach, as well as in other stone fruit crops, such as almond, apricot, cherry and plum.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 97 (1998), S. 1269-1278 
    ISSN: 1432-2242
    Keywords: Key words Simple sequence repeat (SSR) ; Microsatellites ; Molecular markers ; Genetics ; Kiwifruit
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  We have isolated and sequenced 263 microsatellite-containing clones from two small insert libraries of Actinidia chinensis enriched for (AC/GT) and (AG/CT) repeats, respectively. Primer pairs were designed for 203 microsatellite loci and successfully amplified from both plasmid and A. chinensis genomic DNA. In this paper we report the sequences of 40 primer pairs for which we have demonstrated Mendelian segregation in the progeny from controlled crosses. The polymorphism of ten microsatellites of each type was evaluated in four diploid and six tetraploid genotypes of A. chinensis. All microsatellites proved to be polymorphic, the number of alleles per locus detected in polyacrylamide sequencing gels ranging from 9 to 17. The high degree of polymorphism in Actinidia renders these markers useful either for mapping in A. chinensis or for fingerprinting cultivars of both domesticated kiwifruit species (A. chinensis and A. deliciosa). While most primer pairs produced single amplification products, about 20% generated banding patterns consistent with the amplification of two different loci. This supports the hypothesis that diploid species of Actinidia (2n=2x=58) are polyploid in origin with a basic chromosome number x=14/15 and that chromosome duplication may have occurred during the evolution of the genus. Finally, we have assayed the cross-species transportability of primer pairs designed from A. chinensis sequences and have found extensive cross-species amplification within the genus Actinidia; 75% of primer pairs gave successful amplification in the eight species assayed (A. arguta, A. rufa, A. polygama, A. chrysantha, A. callosa, A. hemsleyana, A. eriantha, and A. deliciosa), which are representative of the four sections into which the genus is currently split.
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  • 3
    Publication Date: 2020-02-12
    Keywords: 550 - Earth sciences
    Type: info:eu-repo/semantics/conferenceObject
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  • 4
    Publication Date: 2020-02-12
    Keywords: 550 - Earth sciences
    Type: info:eu-repo/semantics/conferenceObject
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  • 5
    Publication Date: 2020-02-12
    Description: SKS and SKKS shear waves recorded on the INDEPTH III seismic array deployed in central Tibet during 1998 - 1999 have been analysed for the direction and extent of seismic polarization anisotropy. The 400-km-long NNW trending array extended south to north, from the central Lhasa terrane, across the Karakoram-Jiali fault system and Banggong-Nujiang suture to the central Qiangtang terrane. Substantial splitting with delay times from 1 to 2 s, and fast directions varying from E-W to NE-SW, was observed for stations in the Qiangtang trerrane and northernmost Lhasa terrane. No detectable splitting was observed for stations located farther south in the central Lahsa terrane. The change in shear wave splitting characteristics occurs at 32°N, approximately coincident with the transcurrent Karakoram-Jiali fault system but ~40 km south of the surface trace of the Banggong-Nujiang suture. This location is also near the southernmost edge of a region of high Sn attenuation and low upper mantle velocities found in previous studies. The transition between no measured splitting and strong anisotropy (2.2 s delay time) is exceptionally sharp (=15 km), suggesting a large crustal contribution to the measured splitting. The E-W to NE-SW fast directions are broadly similar to the fast directions observed farther east along the Yadong-Golmud highway, suggesting that no large-scale change in anisotropic properties occurs in the east-west direction. However, in detail, fast directions and delay times vary over lateral distances of ~100 km in both the N-S and E-W direction by as much as 40° and 0.5-1 s, respectively. The onset of measurable splitting at 32° N most likely marks the northern limit of the underthrusting Indian lithosphere, which is characterized by negligible polarization anisotropy. Taken in conjunction with decades of geophysical and geological observations in Tibet, the new anisotropy measurements are consistent with a model where hot and weak upper mantle beneath northern Tibet is being squeezed and sheared between the advancing Indian lithosphere to the south and the Tsaidam and Tarim Lithospheres to the north and west, resulting in eastward flow and possibly thickening and subsequent detachment due to gravitational instability. In northern Tibet, crustal deformation clearly follows this large-scale deformation pattern.
    Keywords: 550 - Earth sciences
    Language: English
    Type: info:eu-repo/semantics/article
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