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  • Dissolved oxygen  (2)
  • Miscellaneous Medical  (2)
  • Respiration  (2)
  • 165-1002; Age, maximum/old; Age, minimum/young; Age model; Cayman Rise, Caribbean Sea; COMPCORE; Composite Core; DEPTH, sediment/rock; Joides Resolution; Leg165  (1)
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Keywords
  • 1
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Clinical Anatomy 4 (1991), S. 433-446 
    ISSN: 0897-3806
    Keywords: MRI ; pulmonary ligament ; ethiodol oil ; heart lung model ; transplantations ; lymphangiogram ; Life and Medical Sciences ; Miscellaneous Medical
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: The lungs and hearts of 15 swine were surgically harvested intact and studied in the fresh state. The lymphatics of the lung and mediastinum were cannulated and contrast medium was introduced by retrograde injection to identify the visceral pleural lymphatics and deep lymphatics of the lung. Radiographic x-ray, CT, MR, and color photographic images were obtained. Collateralization, extravasation (bronchorrhea), perivascular stasis, and circumvention were demonstrated. Lymphatic communication with the contralateral lung, thoracic duct, heart, and the diaphragm was demonstrated. The findings correlate with the lymphangiographic display of lymphedema of the extremities, obstruction to lymph flow secondary to congenital abnormalities, trauma, tumor, and infections. Our results support the view that stents and/or large bore needles may be introduced into the superficial lymphatics of the lung. The lymphatics of the lung may be anastomosed post lung transplantation and thus possibly reduce passive congestion that occurs in the early postoperative period. The authors postulate that tumor cells and infectious agents may be spread from one lung to the other by the anatomical pathways demonstrated.
    Additional Material: 15 Ill.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Clinical Anatomy 8 (1995), S. 1-16 
    ISSN: 0897-3806
    Keywords: anatomy ; brachial plexopathy ; nerve model ; neuropathy ; MRI ; patholog ; Life and Medical Sciences ; Miscellaneous Medical
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Medicine
    Notes: Magnetic resonance images (MRI) of brachial plexus anatomy bilaterally, not possible by plain radiographs or CT, were presented to the Vascular Surgery, Neurology, and the Neurosurgery departments. Patients were requested for MRI of their brachial plexus. They were referred for imaging and the imaging results were presented to the faculty and housestaff. Our technique was accepted and adopted to begin referrals for MRI evaluation of brachial plexopathy. Over 175 patients have been studied. Eighty-five patients were imaged with the 1.5 Tesla magnet (Signa; General Electric Medical Systems, Milwaukee, WI) 3-D reconstruction MRI. Coronal, transverse (axial), oblique transverse, and sagittal plane T1-weighted and selected T2-weighted pulse sequences were obtained at 4-5 mm slice thickness, 40-45 full field of view, and a 512 × 256 size matrix. Saline water bags were used to enhance the signal between the neck and the thorax. Sites of brachial plexus compromise were demonstrated. Our technique with 3-D reconstruction increased the definition of brachial plexus pathology. The increased anatomical definition enabled the vascular surgeons and neurosurgeons to improve patient care. Brachial plexus in vivo anatomy as displayed by MRI, magnetic resonance angiography (MRA), and 3-D reconstruction offered an opportunity to augment the teaching of clinical anatomy to medical students and health professionals. Selected case presentations (body builder, anomalous muscle, fractured clavicle, thyroid goiter, silicone breast implant rupture, and cervical rib) demonstrated compromise of the brachial plexus displayed by MRI. The MRI and 3-D reconstruction techniques, demonstrating the bilateral landmark anatomy, increased the definition of the clinical anatomy and resulted in greater knowledge of patient care management. © 1995 WiIey-Liss, Inc.
    Additional Material: 20 Ill.
    Type of Medium: Electronic Resource
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  • 3
    Publication Date: 2022-05-25
    Description: Author Posting. © The Author(s), 2018. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Limnology and Oceanography-Methods 16 (2018): 323-338, doi:10.1002/lom3.10247.
    Description: We describe a new, autonomous, incubation-based instrument that is deployed in situ to determine rates of gross community respiration and net community production in marine and aquatic ecosystems. During deployments at a coastal pier and in the open ocean, the PHORCYS (PHOtosynthesis and Respiration Comparison-Yielding System) captured dissolved oxygen fluxes over hourly timescales that were missed by traditional methods. The instrument uses fluorescence-quenching optodes fitted into separate light and dark chambers; these are opened and closed with piston-like actuators, allowing the instrument to make multiple, independent rate estimates in the course of each deployment. Consistent with other studies in which methods purporting to measure the same metabolic processes have yielded divergent results, respiration rate estimates from the PHORCYS were systematically higher than those calculated for the same waters using a traditional two-point Winkler titration technique. However, PHORCYS estimates of gross respiration agreed generally with separate incubations in bottles fitted with optode sensor spots. An Appendix describes a new method for estimating uncertainties in metabolic rates calculated from continuous dissolved oxygen data. Multiple successful, unattended deployments of the PHORCYS represent a small step toward fully autonomous observations of community metabolism. Yet the persistence of unexplained disagreements among aquatic metabolic rate estimates — such as those we observed between rates calculated with the PHORCYS and two existing, widely-accepted bottle-based methods — suggests that a new community intercalibration effort is warranted to address lingering sources of error in these critical measurements.
    Description: This research was supported by the U.S. National Science Foundation (awards OCE-1155438 to B.A.S.V.M., J.R.V., and R.G.K., and OCE- 1059884 to B.A.S.V.M.), the Woods Hole Oceanographic Institution through a Cecil and Ida Green Foundation Innovative Technology Award and an Interdisciplinary Science Award, and a U.S. Environmental Protection Agency (EPA) STAR Graduate Fellowship to J.R.C. under Fellowship Assistance Agreement no. FP-91744301-0.
    Keywords: Respiration ; Community metabolism ; Aquatic microbial ecology ; Autonomous instrumentation ; Optodes ; Dissolved oxygen ; Ocean observing
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
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  • 4
    Publication Date: 2022-05-25
    Description: Author Posting. © The Author(s), 2013. This is the author's version of the work. It is posted here by permission of Springer for personal use, not for redistribution. The definitive version was published in Estuaries and Coasts 36 (2013): 74-97, doi:10.1007/s12237-012-9560-5.
    Description: Biogeochemical cycles in estuaries are regulated by a diverse set of physical and biological variables that operate over a variety of time scales. Using in situ optical sensors, we conducted a high-frequency time-series study of several biogeochemical parameters at a mooring in central Long Island Sound from May to August 2010. During this period, we documented well-defined diel cycles in nitrate concentration that were correlated to dissolved oxygen, wind stress, tidal mixing, and irradiance. By filtering the data to separate the nitrate time series into various signal components, we estimated the amount of variation that could be ascribed to each process. Primary production and surface wind stress explained 59% and 19%, respectively, of the variation in nitrate concentrations. Less frequent physical forcings, including large-magnitude wind events and spring tides, served to decouple the relationship between oxygen, nitrate, and sunlight on about one-quarter of study days. Daytime nitrate minima and dissolved oxygen maxima occurred nearly simultaneously on the majority (〉 80%) of days during the study period; both were strongly correlated with the daily peak in irradiance. Nighttime nitrate maxima reflected a pattern in which surface-layer stocks were depleted each afternoon and recharged the following night. Changes in nitrate concentrations were used to generate daily estimates of new primary production (182 ± 37 mg C m-2 d-1) and the f-ratio (0.25), i.e., the ratio of production based on nitrate to total production. These estimates, the first of their kind in Long Island Sound, were compared to values of community respiration, primary productivity, and net ecosystem metabolism, which were derived from in situ measurements of oxygen concentration. Daily averages of the three metabolic parameters were 1660 ± 431, 2080 ± 419, and 429 ± 203 mg C m-2 d-1, respectively. While the system remained weakly autotrophic over the duration of the study period, we observed very large day-to-day differences in the f-ratio and in the various metabolic parameters.
    Description: This work was supported by the Yale Institute for Biospheric Studies, the Sounds Conservancy of the Quebec-Labrador Foundation, and the Yale School of Forestry and Environmental Studies Carpenter-Sperry Fund.
    Description: 2014-01-01
    Keywords: Long Island Sound ; Nitrate ; Nitrogen ; New production ; In situ measurements ; Eutrophication ; Dissolved oxygen ; Net ecosystem metabolism ; Wind forcing ; Wind stress ; f-ratio
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
    Format: application/pdf
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  • 5
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2017
    Description: While aerobic respiration is typically invoked as the dominant mass-balance sink for organic matter in the upper ocean, many other biological and abiotic processes can degrade particulate and dissolved substrates on globally significant scales. The relative strengths of these other remineralization processes — including mechanical mechanisms such as dissolution and disaggregation of sinking particles, and abiotic processes such as photooxidation — remain poorly constrained. In this thesis, I examine the biogeochemical significance of various alternative pathways of organic matter remineralization using a combination of field experiments, modeling approaches, geochemical analyses, and a new, high-throughput lipidomics method for identification of lipid biomarkers. I first assess the relative importance of particleattached microbial respiration compared to other processes that can degrade sinking marine particles. A hybrid methodological approach — comparison of substrate-specific respiration rates from across the North Atlantic basin with Monte Carlo-style sensitivity analyses of a simple mechanistic model — suggested sinking particle material was transferred to the water column by various biological and mechanical processes nearly 3.5 times as fast as it was directly respired, questioning the conventional assumption that direct respiration dominates remineralization. I next present and demonstrate a new lipidomics method and open-source software package for discovery and identification of molecular biomarkers for organic matter degradation in large, high-mass-accuracy HPLC-ESI-MS datasets. I use the software to unambiguously identify more than 1,100 unique lipids, oxidized lipids, and oxylipins in data from cultures of the marine diatom Phaeodactylum tricornutum that were subjected to oxidative stress. Finally, I present the results of photooxidation experiments conducted with liposomes — nonliving aggregations of lipids — in natural waters of the Southern Ocean. A broadband polychromatic apparent quantum yield (AQY) is applied to estimate rates of lipid photooxidation in surface waters of the West Antarctic Peninsula, which receive seasonally elevated doses of ultraviolet radiation as a consequence of anthropogenic ozone depletion in the stratosphere. The mean daily rate of lipid photooxidation (50 ± 11 pmol IP-DAG L−1 d−1, equivalent to 31 ± 7 𝜇g C m−3 d−1) represented between 2 and 8 % of the total bacterial production observed in surface waters immediately following the retreat of the sea ice.
    Description: Most of the work in this thesis was supported by awards to my advisor from the National Science Foundation (NSF OCE-1155438, OCE-1059884, and OCE-1031143), the Gordon and Betty Moore Foundation (GBMF3301), the Woods Hole Oceanographic Institution (through a Cecil and Ida Green Foundation Innovative Technology Award), and the Simons Foundation as part of the Simons Collaboration on Ocean Processes and Ecology (SCOPE). My work at Palmer Station and aboard the ARSV Laurence M. Gould was supported by the Palmer LTER study (NSF awards OPP-9011927, 9632763, 0217282, 0823101, and GEO-PLR 1440435, to H. Ducklow and others). I was personally supported in the middle years of my thesis research by a U.S. Environmental Protection Agency (EPA) STAR Graduate Fellowship (Fellowship Assistance agreement FP-91744301-0). During my fourth year, I received support from the Stanley W. Watson Student Fellowship Fund. Benefits I earned on active duty under the Post 9/11 GI Bill supported me financially in the first year of my Ph.D. studies. I received supplementary funding for my work in Antarctica through an award from the WHOI Ocean Ventures Fund.
    Keywords: Microorganisms ; Respiration ; Liposomes ; Knorr (Ship : 1970-) Cruise KN207-1 ; Knorr (Ship : 1970-) Cruise KN207-3
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 6
    Publication Date: 2024-04-16
    Keywords: 165-1002; Age, maximum/old; Age, minimum/young; Age model; Cayman Rise, Caribbean Sea; COMPCORE; Composite Core; DEPTH, sediment/rock; Joides Resolution; Leg165
    Type: Dataset
    Format: text/tab-separated-values, 10025 data points
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